RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 USH1GQ495M9 461 aa27.35■■□□□ 1.97
SNF8-217ENST00000576353 ZNF654Q8IZM8 581 aa27.35■■□□□ 1.97
SNF8-217ENST00000576353 NUP133Q8WUM0 1156 aa27.35■■□□□ 1.97
SNF8-217ENST00000576353 CLEC4DQ8WXI8 215 aa27.35■■□□□ 1.97
SNF8-217ENST00000576353 PAWRQ96IZ0 340 aaKnown RBP27.35■■□□□ 1.97
SNF8-217ENST00000576353 FGD4Q96M96 766 aa27.35■■□□□ 1.97
SNF8-217ENST00000576353 GPHNQ9NQX3 736 aaPredicted RBP27.35■■□□□ 1.97
SNF8-217ENST00000576353 ASB14A6NK59 587 aa27.34■■□□□ 1.97
SNF8-217ENST00000576353 NFIBO00712 420 aa27.34■■□□□ 1.97
SNF8-217ENST00000576353 EPB41L2O43491 1005 aaKnown RBP27.34■■□□□ 1.97
SNF8-217ENST00000576353 SNAI1O95863 264 aaPredicted RBP27.34■■□□□ 1.97
SNF8-217ENST00000576353 HMGB1P09429 215 aaKnown RBP27.34■■□□□ 1.97
SNF8-217ENST00000576353 HSPA4P34932 840 aa27.34■■□□□ 1.97
SNF8-217ENST00000576353 BAATQ14032 418 aaPredicted RBP27.34■■□□□ 1.97
SNF8-217ENST00000576353 QRICH1Q2TAL8 776 aa27.34■■□□□ 1.97
SNF8-217ENST00000576353 DHX32Q7L7V1 743 aaKnown RBP27.34■■□□□ 1.97
SNF8-217ENST00000576353 FBXO11Q86XK2 927 aa27.34■■□□□ 1.97
SNF8-217ENST00000576353 KCNB2Q92953 911 aa27.34■■□□□ 1.97
SNF8-217ENST00000576353 MAF1Q9H063 256 aa27.34■■□□□ 1.97
SNF8-217ENST00000576353 ABCB11O95342 1321 aa27.34■■□□□ 1.97
SNF8-217ENST00000576353 PTPDC1A2A3K4 754 aa27.33■■□□□ 1.97
SNF8-217ENST00000576353 SOWAHBA6NEL2 793 aa27.33■■□□□ 1.97
SNF8-217ENST00000576353 ZNF865P0CJ78 1059 aaPredicted RBP27.33■■□□□ 1.97
SNF8-217ENST00000576353 KIF5BP33176 963 aa27.33■■□□□ 1.97
SNF8-217ENST00000576353 RNF207Q6ZRF8 634 aa27.33■■□□□ 1.97
SNF8-217ENST00000576353 ARMCX2Q7L311 632 aa27.33■■□□□ 1.97
SNF8-217ENST00000576353 RGS22Q8NE09 1264 aa27.33■■□□□ 1.97
SNF8-217ENST00000576353 CTCFLQ8NI51 663 aaPredicted RBP27.33■■□□□ 1.97
SNF8-217ENST00000576353 ABHD16BQ9H3Z7 469 aa27.33■■□□□ 1.97
SNF8-217ENST00000576353 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.33■■□□□ 1.97
SNF8-217ENST00000576353 ADD3Q9UEY8 706 aaKnown RBP27.33■■□□□ 1.97
SNF8-217ENST00000576353 CALM1P0DP23 149 aa27.32■■□□□ 1.96
SNF8-217ENST00000576353 CALM2P0DP24 149 aa27.32■■□□□ 1.96
SNF8-217ENST00000576353 CALM3P0DP25 149 aa27.32■■□□□ 1.96
SNF8-217ENST00000576353 TRAF1Q13077 416 aa27.32■■□□□ 1.96
SNF8-217ENST00000576353 COL9A3Q14050 684 aaPredicted RBP27.32■■□□□ 1.96
SNF8-217ENST00000576353 ADCK5Q3MIX3 580 aa27.32■■□□□ 1.96
SNF8-217ENST00000576353 CCDC144CPQ8IYA2 1237 aa27.32■■□□□ 1.96
SNF8-217ENST00000576353 ARRDC4Q8NCT1 418 aa27.32■■□□□ 1.96
SNF8-217ENST00000576353 DIS3LQ8TF46 1054 aaKnown RBP27.32■■□□□ 1.96
SNF8-217ENST00000576353 MTMR8Q96EF0 704 aa27.32■■□□□ 1.96
SNF8-217ENST00000576353 AMNQ9BXJ7 453 aa27.32■■□□□ 1.96
SNF8-217ENST00000576353 RIOX1Q9H6W3 641 aa27.32■■□□□ 1.96
SNF8-217ENST00000576353 SLC12A7Q9Y666 1083 aa27.32■■□□□ 1.96
SNF8-217ENST00000576353 ZBTB5O15062 677 aa27.31■■□□□ 1.96
SNF8-217ENST00000576353 AKR1A1P14550 325 aa27.31■■□□□ 1.96
SNF8-217ENST00000576353 MNX1P50219 401 aaPredicted RBP27.31■■□□□ 1.96
SNF8-217ENST00000576353 EXOSC10Q01780 885 aaKnown RBP27.31■■□□□ 1.96
SNF8-217ENST00000576353 ACVR2BQ13705 512 aa27.31■■□□□ 1.96
SNF8-217ENST00000576353 LRRC2Q9BYS8 371 aa27.31■■□□□ 1.96
SNF8-217ENST00000576353 C11orf49Q9H6J7 331 aa27.31■■□□□ 1.96
SNF8-217ENST00000576353 FAM184BQ9ULE4 1060 aa27.31■■□□□ 1.96
SNF8-217ENST00000576353 MRPL11Q9Y3B7 192 aaKnown RBP27.31■■□□□ 1.96
SNF8-217ENST00000576353 RARBP10826 455 aa27.3■■□□□ 1.96
SNF8-217ENST00000576353 GNAQP50148 359 aa27.3■■□□□ 1.96
SNF8-217ENST00000576353 SYNE3Q6ZMZ3 975 aa27.3■■□□□ 1.96
SNF8-217ENST00000576353 SGMS1Q86VZ5 419 aa27.3■■□□□ 1.96
SNF8-217ENST00000576353 MCF2L2Q86YR7 1114 aa27.3■■□□□ 1.96
SNF8-217ENST00000576353 DPF3Q92784 378 aa27.3■■□□□ 1.96
SNF8-217ENST00000576353 LZTS2Q9BRK4 669 aa27.3■■□□□ 1.96
SNF8-217ENST00000576353 MYL10Q9BUA6 226 aa27.3■■□□□ 1.96
SNF8-217ENST00000576353 ZHX1Q9UKY1 873 aaPredicted RBP27.3■■□□□ 1.96
SNF8-217ENST00000576353 LOC102724159A0A0B4J2E5 919 aa27.29■■□□□ 1.96
SNF8-217ENST00000576353 CALML3P27482 149 aa27.29■■□□□ 1.96
SNF8-217ENST00000576353 RPS6P62753 249 aaKnown RBP27.29■■□□□ 1.96
SNF8-217ENST00000576353 PWP2Q15269 919 aaKnown RBP27.29■■□□□ 1.96
SNF8-217ENST00000576353 ANO1Q5XXA6 986 aa27.29■■□□□ 1.96
SNF8-217ENST00000576353 SNX14Q9Y5W7 946 aa27.29■■□□□ 1.96
SNF8-217ENST00000576353 PLXNA1Q9UIW2 1896 aa27.29■■□□□ 1.96
SNF8-217ENST00000576353 SMARCA1P28370 1054 aa27.28■■□□□ 1.96
SNF8-217ENST00000576353 SLC30A10Q6XR72 485 aa27.28■■□□□ 1.96
SNF8-217ENST00000576353 TNRC18O15417 2968 aaPredicted RBP27.27■■□□□ 1.96
SNF8-217ENST00000576353 PDE4DIPQ5VU43 2346 aa27.27■■□□□ 1.96
SNF8-217ENST00000576353 DNM1LO00429 736 aa27.27■■□□□ 1.96
SNF8-217ENST00000576353 SLC35G1Q2M3R5 365 aa27.27■■□□□ 1.96
SNF8-217ENST00000576353 HOMER1Q86YM7 354 aa27.27■■□□□ 1.96
SNF8-217ENST00000576353 JAKMIP1Q96N16 626 aaKnown RBP27.27■■□□□ 1.96
SNF8-217ENST00000576353 PURBQ96QR8 312 aaKnown RBP27.27■■□□□ 1.96
SNF8-217ENST00000576353 PIGSQ96S52 555 aa27.27■■□□□ 1.96
SNF8-217ENST00000576353 MPHOSPH6Q99547 160 aaKnown RBP27.27■■□□□ 1.96
SNF8-217ENST00000576353 XPNPEP3Q9NQH7 507 aa27.27■■□□□ 1.96
SNF8-217ENST00000576353 PCDHA1Q9Y5I3 950 aa27.27■■□□□ 1.96
SNF8-217ENST00000576353 MKI67P46013 3256 aaKnown RBP27.26■■□□□ 1.96
SNF8-217ENST00000576353 ASTN1O14525 1302 aa27.26■■□□□ 1.95
SNF8-217ENST00000576353 PNMA6FA0A0J9YX94 578 aa27.26■■□□□ 1.95
SNF8-217ENST00000576353 CYTH3O43739 400 aa27.26■■□□□ 1.95
SNF8-217ENST00000576353 COL6A1P12109 1028 aa27.26■■□□□ 1.95
SNF8-217ENST00000576353 PSMA5P28066 241 aa27.26■■□□□ 1.95
SNF8-217ENST00000576353 ALDH5A1P51649 535 aaPredicted RBP27.26■■□□□ 1.95
SNF8-217ENST00000576353 PRPF38BQ5VTL8 546 aaKnown RBP27.26■■□□□ 1.95
SNF8-217ENST00000576353 DNERQ8NFT8 737 aa27.26■■□□□ 1.95
SNF8-217ENST00000576353 MORC4Q8TE76 937 aa27.26■■□□□ 1.95
SNF8-217ENST00000576353 SPZ1Q9BXG8 430 aa27.26■■□□□ 1.95
SNF8-217ENST00000576353 USP26Q9BXU7 913 aa27.26■■□□□ 1.95
SNF8-217ENST00000576353 B4DLN1 442 aa27.25■■□□□ 1.95
SNF8-217ENST00000576353 KBTBD13C9JR72 458 aa27.25■■□□□ 1.95
SNF8-217ENST00000576353 MRPL12P52815 198 aaKnown RBP27.25■■□□□ 1.95
SNF8-217ENST00000576353 FGD1P98174 961 aa27.25■■□□□ 1.95
SNF8-217ENST00000576353 CCDC144BQ3MJ40 725 aa27.25■■□□□ 1.95
SNF8-217ENST00000576353 BLOC1S2Q6QNY1 142 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms