RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 TRIM17Q9Y577 477 aa16.18■□□□□ 0.18
RPAIN-217ENST00000575711 ABCB11O95342 1321 aa16.18■□□□□ 0.18
RPAIN-217ENST00000575711 STRNO43815 780 aa16.17■□□□□ 0.18
RPAIN-217ENST00000575711 FCER1AP12319 257 aa16.17■□□□□ 0.18
RPAIN-217ENST00000575711 TAL1P17542 331 aaPredicted RBP16.17■□□□□ 0.18
RPAIN-217ENST00000575711 PTPREP23469 700 aa16.17■□□□□ 0.18
RPAIN-217ENST00000575711 CAP1Q01518 475 aa16.17■□□□□ 0.18
RPAIN-217ENST00000575711 KCTD2Q14681 263 aa16.17■□□□□ 0.18
RPAIN-217ENST00000575711 NTRK3Q16288 839 aa16.17■□□□□ 0.18
RPAIN-217ENST00000575711 TRIM22Q8IYM9 498 aa16.17■□□□□ 0.18
RPAIN-217ENST00000575711 SOCS4Q8WXH5 440 aa16.17■□□□□ 0.18
RPAIN-217ENST00000575711 PHKBQ93100 1093 aa16.17■□□□□ 0.18
RPAIN-217ENST00000575711 MMP19Q99542 508 aa16.17■□□□□ 0.18
RPAIN-217ENST00000575711 MRPL11Q9Y3B7 192 aaKnown RBP16.17■□□□□ 0.18
RPAIN-217ENST00000575711 PCDHA1Q9Y5I3 950 aa16.17■□□□□ 0.18
RPAIN-217ENST00000575711 V9GY48 417 aaPredicted RBP16.17■□□□□ 0.18
RPAIN-217ENST00000575711 hCG_1642624A0A1W2PR95 340 aa16.16■□□□□ 0.18
RPAIN-217ENST00000575711 SLC15A5A6NIM6 579 aa16.16■□□□□ 0.18
RPAIN-217ENST00000575711 PRPF3O43395 683 aaKnown RBP16.16■□□□□ 0.18
RPAIN-217ENST00000575711 PPP1R11O60927 126 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-217ENST00000575711 CD2BP2O95400 341 aaKnown RBP16.16■□□□□ 0.18
RPAIN-217ENST00000575711 SSRP1Q08945 709 aaKnown RBP16.16■□□□□ 0.18
RPAIN-217ENST00000575711 GRB14Q14449 540 aa16.16■□□□□ 0.18
RPAIN-217ENST00000575711 OTOP1Q7RTM1 612 aa16.16■□□□□ 0.18
RPAIN-217ENST00000575711 ABRAQ8N0Z2 381 aa16.16■□□□□ 0.18
RPAIN-217ENST00000575711 NUDT12Q9BQG2 462 aa16.16■□□□□ 0.18
RPAIN-217ENST00000575711 SLC26A6Q9BXS9 759 aa16.16■□□□□ 0.18
RPAIN-217ENST00000575711 RNF26Q9BY78 433 aaPredicted RBP16.16■□□□□ 0.18
RPAIN-217ENST00000575711 SRRDQ9UH36 339 aa16.16■□□□□ 0.18
RPAIN-217ENST00000575711 PRMT2P55345 433 aa16.15■□□□□ 0.18
RPAIN-217ENST00000575711 PRKCZQ05513 592 aa16.15■□□□□ 0.18
RPAIN-217ENST00000575711 MUM1L1Q5H9M0 696 aa16.15■□□□□ 0.18
RPAIN-217ENST00000575711 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.15■□□□□ 0.18
RPAIN-217ENST00000575711 HEATR3Q7Z4Q2 680 aa16.15■□□□□ 0.18
RPAIN-217ENST00000575711 CTU1Q7Z7A3 348 aaKnown RBP16.15■□□□□ 0.18
RPAIN-217ENST00000575711 ANKRD35Q8N283 1001 aa16.15■□□□□ 0.18
RPAIN-217ENST00000575711 CLEC4DQ8WXI8 215 aa16.15■□□□□ 0.18
RPAIN-217ENST00000575711 hCG_1984214I3L0E3 225 aa16.14■□□□□ 0.17
RPAIN-217ENST00000575711 NFIBO00712 420 aa16.14■□□□□ 0.17
RPAIN-217ENST00000575711 PPFIA3O75145 1194 aa16.14■□□□□ 0.17
RPAIN-217ENST00000575711 ADORA2AP29274 412 aa16.14■□□□□ 0.17
RPAIN-217ENST00000575711 FLT3LGP49771 235 aa16.14■□□□□ 0.17
RPAIN-217ENST00000575711 MAP2K5Q13163 448 aa16.14■□□□□ 0.17
RPAIN-217ENST00000575711 PFKFB3Q16875 520 aaPredicted RBP16.14■□□□□ 0.17
RPAIN-217ENST00000575711 MORN1Q5T089 497 aa16.14■□□□□ 0.17
RPAIN-217ENST00000575711 NSMFQ6X4W1 530 aa16.14■□□□□ 0.17
RPAIN-217ENST00000575711 DPP9Q86TI2 863 aa16.14■□□□□ 0.17
RPAIN-217ENST00000575711 MCF2L2Q86YR7 1114 aa16.14■□□□□ 0.17
RPAIN-217ENST00000575711 CCDC83Q8IWF9 413 aa16.14■□□□□ 0.17
RPAIN-217ENST00000575711 ZNF713Q8N859 430 aaPredicted RBP16.14■□□□□ 0.17
RPAIN-217ENST00000575711 DDX11Q96FC9 970 aa16.14■□□□□ 0.17
RPAIN-217ENST00000575711 A1CFQ9NQ94 594 aaKnown RBP16.14■□□□□ 0.17
RPAIN-217ENST00000575711 GJD2Q9UKL4 321 aa16.14■□□□□ 0.17
RPAIN-217ENST00000575711 GABRQQ9UN88 632 aa16.14■□□□□ 0.17
RPAIN-217ENST00000575711 PFASO15067 1338 aa16.14■□□□□ 0.17
RPAIN-217ENST00000575711 ZSWIM8A7E2V4 1837 aa16.13■□□□□ 0.17
RPAIN-217ENST00000575711 SCG2P13521 617 aa16.13■□□□□ 0.17
RPAIN-217ENST00000575711 RGS2P41220 211 aa16.13■□□□□ 0.17
RPAIN-217ENST00000575711 ST3GAL1Q11201 340 aa16.13■□□□□ 0.17
RPAIN-217ENST00000575711 WWC2Q6AWC2 1192 aa16.13■□□□□ 0.17
RPAIN-217ENST00000575711 RAET1EQ8TD07 263 aa16.13■□□□□ 0.17
RPAIN-217ENST00000575711 GPKOWQ92917 476 aaPredicted RBP eCLIP16.13■□□□□ 0.17
RPAIN-217ENST00000575711 TMX3Q96JJ7 454 aa16.13■□□□□ 0.17
RPAIN-217ENST00000575711 SLC5A4Q9NY91 659 aa16.13■□□□□ 0.17
RPAIN-217ENST00000575711 STK36Q9NRP7 1315 aa16.13■□□□□ 0.17
RPAIN-217ENST00000575711 MGAMO43451 1857 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 PTPDC1A2A3K4 754 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 DEXIO95424 95 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 CTDNEP1O95476 244 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 CYP2B6P20813 491 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 NAPAP54920 295 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 IRF5Q13568 498 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 PKN1Q16512 942 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 PKN2Q16513 984 aaKnown RBP16.12■□□□□ 0.17
RPAIN-217ENST00000575711 PPP1R18Q6NYC8 613 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 RNF207Q6ZRF8 634 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 RGS22Q8NE09 1264 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 NSUN7Q8NE18 718 aaKnown RBP16.12■□□□□ 0.17
RPAIN-217ENST00000575711 USP6NLQ92738 828 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 APBA2Q99767 749 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 LLPHQ9BRT6 129 aaKnown RBP16.12■□□□□ 0.17
RPAIN-217ENST00000575711 MAF1Q9H063 256 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 BARHL2Q9NY43 387 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 CYP39A1Q9NYL5 469 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 CASP8AP2Q9UKL3 1982 aa16.12■□□□□ 0.17
RPAIN-217ENST00000575711 STXBP3O00186 592 aa16.11■□□□□ 0.17
RPAIN-217ENST00000575711 PGK2P07205 417 aa16.11■□□□□ 0.17
RPAIN-217ENST00000575711 HOXC6P09630 235 aa16.11■□□□□ 0.17
RPAIN-217ENST00000575711 XRCC5P13010 732 aaKnown RBP16.11■□□□□ 0.17
RPAIN-217ENST00000575711 BAATQ14032 418 aaPredicted RBP16.11■□□□□ 0.17
RPAIN-217ENST00000575711 SAMD3Q8N6K7 520 aa16.11■□□□□ 0.17
RPAIN-217ENST00000575711 CCDC12Q8WUD4 166 aaPredicted RBP16.11■□□□□ 0.17
RPAIN-217ENST00000575711 WASF1Q92558 559 aa16.11■□□□□ 0.17
RPAIN-217ENST00000575711 SNX21Q969T3 373 aa16.11■□□□□ 0.17
RPAIN-217ENST00000575711 ORC3Q9UBD5 711 aaPredicted RBP16.11■□□□□ 0.17
RPAIN-217ENST00000575711 PTPN22Q9Y2R2 807 aa16.11■□□□□ 0.17
RPAIN-217ENST00000575711 BAZ2BQ9UIF8 2168 aaKnown RBP16.11■□□□□ 0.17
RPAIN-217ENST00000575711 ZNF236Q9UL36 1845 aa16.1■□□□□ 0.17
RPAIN-217ENST00000575711 DNAJC25-GNG10A0A024R161 153 aa16.1■□□□□ 0.17
RPAIN-217ENST00000575711 POTEB2H3BUK9 544 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms