RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 RABGEF1Q9UJ41 708 aa8.81□□□□□ -1
TOM1L1-220ENST00000575333 CHMP3Q9Y3E7 222 aa8.81□□□□□ -1
TOM1L1-220ENST00000575333 TTLL3Q9Y4R7 772 aa8.81□□□□□ -1
TOM1L1-220ENST00000575333 AOX1Q06278 1338 aa8.81□□□□□ -1
TOM1L1-220ENST00000575333 SPATA31D1Q6ZQQ2 1576 aa8.81□□□□□ -1
TOM1L1-220ENST00000575333 SETD1AO15047 1707 aaKnown RBP8.8□□□□□ -1
TOM1L1-220ENST00000575333 CEMIPQ8WUJ3 1361 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 MYO3AQ8NEV4 1616 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 PRPF3O43395 683 aaKnown RBP8.8□□□□□ -1
TOM1L1-220ENST00000575333 ONECUT3O60422 494 aaPredicted RBP8.8□□□□□ -1
TOM1L1-220ENST00000575333 CLTAP09496 248 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 MSL3P1P0C860 447 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 U2AF1L5P0DN76 240 aaPredicted RBP8.8□□□□□ -1
TOM1L1-220ENST00000575333 MDH1P40925 334 aaKnown RBP8.8□□□□□ -1
TOM1L1-220ENST00000575333 CD97P48960 835 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 POLE2P56282 527 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 HDLBPQ00341 1268 aaKnown RBP8.8□□□□□ -1
TOM1L1-220ENST00000575333 U2AF1Q01081 240 aaKnown RBP eCLIP8.8□□□□□ -1
TOM1L1-220ENST00000575333 FAM160A1Q05DH4 1040 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 NSUN2Q08J23 767 aaKnown RBP eCLIP8.8□□□□□ -1
TOM1L1-220ENST00000575333 TMEM62Q0P6H9 643 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 ADAM9Q13443 819 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 LARP1BQ659C4 914 aaKnown RBP8.8□□□□□ -1
TOM1L1-220ENST00000575333 NANOGNBQ7Z5D8 188 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 ZNF280CQ8ND82 737 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 AENQ8WTP8 325 aaKnown RBP8.8□□□□□ -1
TOM1L1-220ENST00000575333 CGREF1Q99674 301 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 TMUB1Q9BVT8 246 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 API5Q9BZZ5 524 aaKnown RBP8.8□□□□□ -1
TOM1L1-220ENST00000575333 SIL1Q9H173 461 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 DDX21Q9NR30 783 aaKnown RBP eCLIP8.8□□□□□ -1
TOM1L1-220ENST00000575333 RMND1Q9NWS8 449 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 CEP131Q9UPN4 1083 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 ATP6V0A2Q9Y487 856 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 KIAA0232Q92628 1395 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 TMEM247A6NEH6 219 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 PPIP5K2O43314 1243 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 ACADSP16219 412 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 ATP6V1C1P21283 382 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 HOXD12P35452 270 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 STAT6P42226 847 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 AK2P54819 239 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 SAFB2Q14151 953 aaKnown RBP eCLIP8.8□□□□□ -1
TOM1L1-220ENST00000575333 PPP1R7Q15435 360 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 IRGCQ6NXR0 463 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 CCNI2Q6ZMN8 369 aaPredicted RBP8.8□□□□□ -1
TOM1L1-220ENST00000575333 SAPCD2Q86UD0 394 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 HOOK3Q86VS8 718 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 CD302Q8IX05 232 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 ATRIPQ8WXE1 791 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 IFT81Q8WYA0 676 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 RIN2Q8WYP3 895 aaPredicted RBP8.8□□□□□ -1
TOM1L1-220ENST00000575333 GFM2Q969S9 779 aaKnown RBP8.8□□□□□ -1
TOM1L1-220ENST00000575333 IFT43Q96FT9 208 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 PANX2Q96RD6 677 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 PUS3Q9BZE2 481 aaKnown RBP8.8□□□□□ -1
TOM1L1-220ENST00000575333 MIS18AQ9NYP9 233 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 UBAP1Q9NZ09 502 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 DKK3Q9UBP4 350 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 LRRC42Q9Y546 428 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 COMMD3-BMI1R4GMX3 469 aa8.8□□□□□ -1
TOM1L1-220ENST00000575333 KNDC1Q76NI1 1749 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 CDK12Q9NYV4 1490 aaPredicted RBP8.79□□□□□ -1
TOM1L1-220ENST00000575333 OVOS2A0A0G2JMS6 1433 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 OVOS2A0A0J9YW53 1432 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 GMNCA6NCL1 334 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 EIF3FO00303 357 aaPredicted RBP8.79□□□□□ -1
TOM1L1-220ENST00000575333 TTI1O43156 1089 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 GFPT2O94808 682 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 CSB-PGBD3P0DP91 1061 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 NR1D1P20393 614 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 SP100P23497 879 aaPredicted RBP8.79□□□□□ -1
TOM1L1-220ENST00000575333 TNFRSF8P28908 595 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 ACADVLP49748 655 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 SERPINB8P50452 374 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 EPHB4P54760 987 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 UBASH3AP57075 661 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 PDE1BQ01064 536 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 TBX2Q13207 712 aaPredicted RBP8.79□□□□□ -1
TOM1L1-220ENST00000575333 CNGA3Q16281 694 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 SLC44A4Q53GD3 710 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 GKAP1Q5VSY0 366 aaPredicted RBP8.79□□□□□ -1
TOM1L1-220ENST00000575333 OVOS2Q6IE36 1432 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 RUFY3Q7L099 469 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 SLC15A3Q8IY34 581 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 ANKS4BQ8N8V4 417 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 TRIML1Q8N9V2 468 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 ANKK1Q8NFD2 765 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 AGAP11Q8TF27 550 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 CCT6BQ92526 530 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 IQCDQ96DY2 449 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 CATSPER2Q96P56 530 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 CCDC85AQ96PX6 553 aaPredicted RBP8.79□□□□□ -1
TOM1L1-220ENST00000575333 NR1H4Q96RI1 486 aaPredicted RBP8.79□□□□□ -1
TOM1L1-220ENST00000575333 TM6SF1Q9BZW5 370 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 FAM117AQ9C073 453 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 ARHGEF10LQ9HCE6 1279 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 PDP2Q9P2J9 529 aa8.79□□□□□ -1
TOM1L1-220ENST00000575333 SUCLA2Q9P2R7 463 aaPredicted RBP8.79□□□□□ -1
TOM1L1-220ENST00000575333 SCOCQ9UIL1 159 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms