RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 BTBD18B2RXH4 712 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 GCFC2P16383 781 aaKnown RBP10.66□□□□□ -0.7
CCDC40-212ENST00000574799 ERCC5P28715 1186 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-212ENST00000574799 SEC24CP53992 1094 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 PARP10Q53GL7 1025 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 CCNI2Q6ZMN8 369 aaPredicted RBP10.66□□□□□ -0.7
CCDC40-212ENST00000574799 DIS3L2Q8IYB7 885 aaKnown RBP10.66□□□□□ -0.7
CCDC40-212ENST00000574799 OR8K1Q8NGG5 319 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 CHP1Q99653 195 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 ABHD10Q9NUJ1 306 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 SLC12A7Q9Y666 1083 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 ZMYM6O95789 1325 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 A0A1B0GTH6 734 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 GSG1L2A8MUP6 293 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 PRKAB2O43741 272 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 TMEM67Q5HYA8 995 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 SHISA4Q96DD7 197 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 SPATS2LQ9NUQ6 558 aaKnown RBP10.66□□□□□ -0.7
CCDC40-212ENST00000574799 UBAP1LF5GYI3 381 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 PRPF6O94906 941 aaKnown RBP10.66□□□□□ -0.7
CCDC40-212ENST00000574799 CXCR5P32302 372 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 RNASE9P60153 205 aaKnown RBP10.66□□□□□ -0.7
CCDC40-212ENST00000574799 TRIML1Q8N9V2 468 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 PRPF38AQ8NAV1 312 aaKnown RBP10.66□□□□□ -0.7
CCDC40-212ENST00000574799 WASF1Q92558 559 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 ARL8AQ96BM9 186 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 RRP36Q96EU6 259 aaKnown RBP10.66□□□□□ -0.7
CCDC40-212ENST00000574799 ALS2CR12Q96Q35 445 aa10.66□□□□□ -0.7
CCDC40-212ENST00000574799 TACO1Q9BSH4 297 aaKnown RBP10.66□□□□□ -0.7
CCDC40-212ENST00000574799 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.66□□□□□ -0.7
CCDC40-212ENST00000574799 TNS1Q9HBL0 1735 aaKnown RBP10.65□□□□□ -0.7
CCDC40-212ENST00000574799 ERICH2A1L162 156 aa10.65□□□□□ -0.7
CCDC40-212ENST00000574799 IFIT3O14879 490 aaKnown RBP10.65□□□□□ -0.7
CCDC40-212ENST00000574799 KRT14P02533 472 aa10.65□□□□□ -0.7
CCDC40-212ENST00000574799 ZFYP08048 801 aaPredicted RBP10.65□□□□□ -0.7
CCDC40-212ENST00000574799 ARFGAP2Q8N6H7 521 aa10.65□□□□□ -0.7
CCDC40-212ENST00000574799 IGDCC4Q8TDY8 1250 aa10.65□□□□□ -0.7
CCDC40-212ENST00000574799 CCDC42Q96M95 316 aa10.65□□□□□ -0.7
CCDC40-212ENST00000574799 BLZF1Q9H2G9 400 aa10.65□□□□□ -0.7
CCDC40-212ENST00000574799 AKR1B10O60218 316 aa10.65□□□□□ -0.7
CCDC40-212ENST00000574799 GYPCP04921 128 aa10.65□□□□□ -0.7
CCDC40-212ENST00000574799 PPARAQ07869 468 aa10.65□□□□□ -0.7
CCDC40-212ENST00000574799 PPP1R7Q15435 360 aa10.65□□□□□ -0.7
CCDC40-212ENST00000574799 RC3H1Q5TC82 1133 aaKnown RBP10.65□□□□□ -0.7
CCDC40-212ENST00000574799 LCORLQ8N3X6 602 aa10.65□□□□□ -0.7
CCDC40-212ENST00000574799 EEF2KMTQ96G04 330 aa10.65□□□□□ -0.7
CCDC40-212ENST00000574799 CABP5Q9NP86 173 aa10.65□□□□□ -0.7
CCDC40-212ENST00000574799 MINPP1Q9UNW1 487 aa10.65□□□□□ -0.7
CCDC40-212ENST00000574799 ZPR1O75312 459 aa10.65□□□□□ -0.71
CCDC40-212ENST00000574799 MYBL2P10244 700 aa10.65□□□□□ -0.71
CCDC40-212ENST00000574799 NR1D1P20393 614 aa10.65□□□□□ -0.71
CCDC40-212ENST00000574799 BMP6P22004 513 aa10.65□□□□□ -0.71
CCDC40-212ENST00000574799 TRIM14Q14142 442 aa10.65□□□□□ -0.71
CCDC40-212ENST00000574799 TTF1Q15361 905 aaPredicted RBP10.65□□□□□ -0.71
CCDC40-212ENST00000574799 TXNRD3Q86VQ6 643 aa10.65□□□□□ -0.71
CCDC40-212ENST00000574799 TRIM47Q96LD4 638 aa10.65□□□□□ -0.71
CCDC40-212ENST00000574799 SLC40A1Q9NP59 571 aa10.65□□□□□ -0.71
CCDC40-212ENST00000574799 NID2Q14112 1375 aa10.65□□□□□ -0.71
CCDC40-212ENST00000574799 SPATA31A6Q5VVP1 1343 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 XBP1P17861 261 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 ERCC3P19447 782 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 SLC8A1P32418 973 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 EPHB4P54760 987 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 CYP27A1Q02318 531 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 PARP9Q8IXQ6 854 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 CCDC13Q8IYE1 715 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 CCDC24Q8N4L8 307 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 ARHGEF1Q92888 912 aaKnown RBP10.64□□□□□ -0.71
CCDC40-212ENST00000574799 NARFQ9UHQ1 456 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 USP21Q9UK80 565 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 ANGEL1Q9UNK9 670 aaKnown RBP10.64□□□□□ -0.71
CCDC40-212ENST00000574799 NAV1Q8NEY1 1877 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 KIF4AO95239 1232 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 LSP1P33241 339 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 COPB1P53618 953 aaKnown RBP10.64□□□□□ -0.71
CCDC40-212ENST00000574799 ERVK-24P63145 666 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 NTRK3Q16288 839 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 SPDL1Q96EA4 605 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 NGLY1Q96IV0 654 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 QSER1Q2KHR3 1735 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 TARSL2A2RTX5 802 aaKnown RBP10.64□□□□□ -0.71
CCDC40-212ENST00000574799 B4E1Z4 1266 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 RGL2O15211 777 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 IDH1O75874 414 aaKnown RBP10.64□□□□□ -0.71
CCDC40-212ENST00000574799 CLTAP09496 248 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 PDHBP11177 359 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 ZNF18P17022 549 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 KRT31Q15323 416 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 ZKSCAN8Q15776 578 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-212ENST00000574799 NAA35Q5VZE5 725 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 NOSTRINQ8IVI9 506 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 ZNF473Q8WTR7 871 aaKnown RBP10.64□□□□□ -0.71
CCDC40-212ENST00000574799 STAG1Q8WVM7 1258 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 RIOK1Q9BRS2 568 aaKnown RBP10.64□□□□□ -0.71
CCDC40-212ENST00000574799 ADD3Q9UEY8 706 aaKnown RBP10.64□□□□□ -0.71
CCDC40-212ENST00000574799 HPSEQ9Y251 543 aa10.64□□□□□ -0.71
CCDC40-212ENST00000574799 KCNJ18B7U540 433 aa10.63□□□□□ -0.71
CCDC40-212ENST00000574799 BACH1O14867 736 aa10.63□□□□□ -0.71
CCDC40-212ENST00000574799 RPS6KA4O75676 772 aa10.63□□□□□ -0.71
CCDC40-212ENST00000574799 GYG1P46976 350 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms