RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 UBE2SQ16763 222 aa15.84■□□□□ 0.13
VPS33B-208ENST00000574755 ABCB5Q2M3G0 1257 aa15.84■□□□□ 0.13
VPS33B-208ENST00000574755 SLFN13Q68D06 897 aa15.84■□□□□ 0.13
VPS33B-208ENST00000574755 TXKP42681 527 aa15.84■□□□□ 0.13
VPS33B-208ENST00000574755 CALCRLQ16602 461 aa15.84■□□□□ 0.13
VPS33B-208ENST00000574755 SPECC1LQ69YQ0 1117 aa15.84■□□□□ 0.13
VPS33B-208ENST00000574755 CCAR2Q8N163 923 aaKnown RBP15.84■□□□□ 0.13
VPS33B-208ENST00000574755 DCAF4Q8WV16 495 aa15.84■□□□□ 0.13
VPS33B-208ENST00000574755 MTMR8Q96EF0 704 aa15.84■□□□□ 0.13
VPS33B-208ENST00000574755 CSRNP1Q96S65 589 aa15.84■□□□□ 0.13
VPS33B-208ENST00000574755 ATRNL1Q5VV63 1379 aa15.84■□□□□ 0.13
VPS33B-208ENST00000574755 TDP2O95551 362 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 MYL1P05976 194 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 PLCG1P19174 1290 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 MRPL12P52815 198 aaKnown RBP15.83■□□□□ 0.12
VPS33B-208ENST00000574755 PAK1Q13153 545 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 GRIPAP1Q4V328 841 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 RTKN2Q8IZC4 609 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 CUEDC2Q9H467 287 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 KBTBD4Q9NVX7 518 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 SF3B2Q13435 895 aaKnown RBP15.83■□□□□ 0.12
VPS33B-208ENST00000574755 PTPN14Q15678 1187 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 CDKAL1Q5VV42 579 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 CCDC112Q8NEF3 446 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 PSTPIP2Q9H939 334 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 TMOD2Q9NZR1 351 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 RWDD2AQ9UIY3 292 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 MAPK8IP1Q9UQF2 711 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 GDAQ9Y2T3 454 aa15.83■□□□□ 0.12
VPS33B-208ENST00000574755 ARFGEF1Q9Y6D6 1849 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 A0A1B0GTH6 734 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 DYNC1I1O14576 645 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 SLC37A4O43826 429 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 COBLO75128 1261 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 RAD17O75943 681 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 CLK2P49760 499 aaKnown RBP15.82■□□□□ 0.12
VPS33B-208ENST00000574755 NR1I3Q14994 352 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 RSBN1LQ6PCB5 846 aaPredicted RBP15.82■□□□□ 0.12
VPS33B-208ENST00000574755 SIAH1Q8IUQ4 282 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 LARGE2Q8N3Y3 721 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 IGSF22Q8N9C0 903 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 MTMR9Q96QG7 549 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 CTAGE1Q96RT6 745 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 MAGEF1Q9HAY2 307 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 KCND1Q9NSA2 647 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 BAG6P46379 1132 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 GOLGA8FQ08AF8 430 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 GOLGA8DPQ0D2H9 430 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 TMEM266Q2M3C6 531 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 QRICH1Q2TAL8 776 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 RBM26Q5T8P6 1007 aaKnown RBP15.82■□□□□ 0.12
VPS33B-208ENST00000574755 E4F1Q66K89 784 aaPredicted RBP15.82■□□□□ 0.12
VPS33B-208ENST00000574755 DEFB132Q7Z7B7 95 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 LRRC15Q8TF66 581 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 NELFBQ8WX92 580 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 CALML4Q96GE6 196 aa15.82■□□□□ 0.12
VPS33B-208ENST00000574755 MYH7BA7E2Y1 1941 aa15.81■□□□□ 0.12
VPS33B-208ENST00000574755 TCP10L2B9ZVM9 353 aa15.81■□□□□ 0.12
VPS33B-208ENST00000574755 F5H6K3 240 aa15.81■□□□□ 0.12
VPS33B-208ENST00000574755 GH2P01242 217 aa15.81■□□□□ 0.12
VPS33B-208ENST00000574755 PRCPP42785 496 aa15.81■□□□□ 0.12
VPS33B-208ENST00000574755 KCNJ6P48051 423 aa15.81■□□□□ 0.12
VPS33B-208ENST00000574755 KLRC3Q07444 240 aa15.81■□□□□ 0.12
VPS33B-208ENST00000574755 KCNB1Q14721 858 aa15.81■□□□□ 0.12
VPS33B-208ENST00000574755 CDC37Q16543 378 aaPredicted RBP15.81■□□□□ 0.12
VPS33B-208ENST00000574755 KMT5BQ4FZB7 885 aa15.81■□□□□ 0.12
VPS33B-208ENST00000574755 CEP135Q66GS9 1140 aa15.81■□□□□ 0.12
VPS33B-208ENST00000574755 APTXQ7Z2E3 356 aaKnown RBP15.81■□□□□ 0.12
VPS33B-208ENST00000574755 PSMD1Q99460 953 aa15.81■□□□□ 0.12
VPS33B-208ENST00000574755 ZNF277Q9NRM2 450 aaPredicted RBP15.81■□□□□ 0.12
VPS33B-208ENST00000574755 LRWD1Q9UFC0 647 aa15.81■□□□□ 0.12
VPS33B-208ENST00000574755 PCDHA1Q9Y5I3 950 aa15.81■□□□□ 0.12
VPS33B-208ENST00000574755 COL2A1P02458 1487 aaPredicted RBP15.81■□□□□ 0.12
VPS33B-208ENST00000574755 SPDYE2BA6NHP3 402 aa15.8■□□□□ 0.12
VPS33B-208ENST00000574755 PSMD14O00487 310 aa15.8■□□□□ 0.12
VPS33B-208ENST00000574755 RIOK3O14730 519 aaKnown RBP15.8■□□□□ 0.12
VPS33B-208ENST00000574755 EDIL3O43854 480 aa15.8■□□□□ 0.12
VPS33B-208ENST00000574755 SPDYE6P0CI01 402 aa15.8■□□□□ 0.12
VPS33B-208ENST00000574755 TBX2Q13207 712 aaPredicted RBP15.8■□□□□ 0.12
VPS33B-208ENST00000574755 FILIP1LQ4L180 1135 aa15.8■□□□□ 0.12
VPS33B-208ENST00000574755 NYAP1Q6ZVC0 841 aa15.8■□□□□ 0.12
VPS33B-208ENST00000574755 OGFOD1Q8N543 542 aa15.8■□□□□ 0.12
VPS33B-208ENST00000574755 ZNF592Q92610 1267 aa15.8■□□□□ 0.12
VPS33B-208ENST00000574755 RAB34Q9BZG1 259 aa15.8■□□□□ 0.12
VPS33B-208ENST00000574755 HDAC9Q9UKV0 1011 aa15.8■□□□□ 0.12
VPS33B-208ENST00000574755 CLRN2A0PK11 232 aa15.8■□□□□ 0.12
VPS33B-208ENST00000574755 DPEP1P16444 411 aa15.8■□□□□ 0.12
VPS33B-208ENST00000574755 FXR2P51116 673 aaKnown RBP eCLIP15.8■□□□□ 0.12
VPS33B-208ENST00000574755 IKQ13123 557 aaPredicted RBP15.8■□□□□ 0.12
VPS33B-208ENST00000574755 PPP4R3AQ6IN85 833 aa15.8■□□□□ 0.12
VPS33B-208ENST00000574755 GMCL1P1Q8NEA9 526 aa15.8■□□□□ 0.12
VPS33B-208ENST00000574755 MMTAG2Q9BU76 263 aaKnown RBP15.8■□□□□ 0.12
VPS33B-208ENST00000574755 TMX1Q9H3N1 280 aa15.8■□□□□ 0.12
VPS33B-208ENST00000574755 ADD3Q9UEY8 706 aaKnown RBP15.8■□□□□ 0.12
VPS33B-208ENST00000574755 PSDA5PKW4 1024 aaPredicted RBP15.79■□□□□ 0.12
VPS33B-208ENST00000574755 TEX33O43247 280 aa15.79■□□□□ 0.12
VPS33B-208ENST00000574755 KLRC4O43908 158 aa15.79■□□□□ 0.12
VPS33B-208ENST00000574755 RHOBTB3O94955 611 aa15.79■□□□□ 0.12
VPS33B-208ENST00000574755 GTF2F1P35269 517 aaKnown RBP eCLIP15.79■□□□□ 0.12
VPS33B-208ENST00000574755 DLGAP5Q15398 846 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms