RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 NUP43Q8NFH3 380 aa7.55□□□□□ -1.2
CDC27-216ENST00000574304 MRGPRX3Q96LB0 322 aa7.55□□□□□ -1.2
CDC27-216ENST00000574304 TRIM55Q9BYV6 548 aa7.55□□□□□ -1.2
CDC27-216ENST00000574304 DCP1AQ9NPI6 582 aaPredicted RBP7.55□□□□□ -1.2
CDC27-216ENST00000574304 LRP2BPQ9P2M1 347 aa7.55□□□□□ -1.2
CDC27-216ENST00000574304 PPP1R1BQ9UD71 204 aaPredicted RBP7.55□□□□□ -1.2
CDC27-216ENST00000574304 ITGAVP06756 1048 aa7.54□□□□□ -1.2
CDC27-216ENST00000574304 ADGRF1Q5T601 910 aa7.54□□□□□ -1.2
CDC27-216ENST00000574304 ZNF227Q86WZ6 799 aa7.54□□□□□ -1.2
CDC27-216ENST00000574304 FAM84AQ96KN4 292 aa7.54□□□□□ -1.2
CDC27-216ENST00000574304 EPN3Q9H201 632 aa7.54□□□□□ -1.2
CDC27-216ENST00000574304 ACSL6Q9UKU0 697 aa7.54□□□□□ -1.2
CDC27-216ENST00000574304 A0A1W2PQ27 194 aa7.53□□□□□ -1.2
CDC27-216ENST00000574304 A0A1W2PQ64 194 aa7.53□□□□□ -1.2
CDC27-216ENST00000574304 A0A1W2PQC6 194 aa7.53□□□□□ -1.2
CDC27-216ENST00000574304 A0A1W2PQD8 194 aa7.53□□□□□ -1.2
CDC27-216ENST00000574304 GTF2F1P35269 517 aaKnown RBP eCLIP7.53□□□□□ -1.2
CDC27-216ENST00000574304 ARL4AP40617 200 aa7.53□□□□□ -1.2
CDC27-216ENST00000574304 CYP4F8P98187 520 aa7.53□□□□□ -1.2
CDC27-216ENST00000574304 LAPTM5Q13571 262 aa7.53□□□□□ -1.2
CDC27-216ENST00000574304 SLC10A6Q3KNW5 377 aa7.53□□□□□ -1.2
CDC27-216ENST00000574304 FBXO15Q8NCQ5 510 aaPredicted RBP7.53□□□□□ -1.2
CDC27-216ENST00000574304 BTN2A2Q8WVV5 523 aa7.53□□□□□ -1.2
CDC27-216ENST00000574304 KCNK12Q9HB15 430 aa7.53□□□□□ -1.2
CDC27-216ENST00000574304 OR14I1A6ND48 311 aa7.52□□□□□ -1.21
CDC27-216ENST00000574304 TBX1O43435 398 aa7.52□□□□□ -1.21
CDC27-216ENST00000574304 MVKQ03426 396 aa7.52□□□□□ -1.21
CDC27-216ENST00000574304 SCRN1Q12765 414 aa7.52□□□□□ -1.21
CDC27-216ENST00000574304 NPM2Q86SE8 214 aaKnown RBP7.52□□□□□ -1.21
CDC27-216ENST00000574304 SLC38A3Q99624 504 aa7.52□□□□□ -1.21
CDC27-216ENST00000574304 NKX2-4Q9H2Z4 354 aa7.52□□□□□ -1.21
CDC27-216ENST00000574304 AGRPO00253 132 aa7.51□□□□□ -1.21
CDC27-216ENST00000574304 U2SURPO15042 1029 aaKnown RBP7.51□□□□□ -1.21
CDC27-216ENST00000574304 C8AP07357 584 aa7.51□□□□□ -1.21
CDC27-216ENST00000574304 MSL3P1P0C860 447 aa7.51□□□□□ -1.21
CDC27-216ENST00000574304 PAMP19021 973 aa7.51□□□□□ -1.21
CDC27-216ENST00000574304 SDHBP21912 280 aa7.51□□□□□ -1.21
CDC27-216ENST00000574304 L1CAMP32004 1257 aa7.51□□□□□ -1.21
CDC27-216ENST00000574304 SYDE1Q6ZW31 735 aaPredicted RBP7.51□□□□□ -1.21
CDC27-216ENST00000574304 ZNF605Q86T29 641 aa7.51□□□□□ -1.21
CDC27-216ENST00000574304 COPS5Q92905 334 aa7.51□□□□□ -1.21
CDC27-216ENST00000574304 ZNF552Q9H707 407 aaPredicted RBP7.51□□□□□ -1.21
CDC27-216ENST00000574304 GPRC5CQ9NQ84 441 aa7.51□□□□□ -1.21
CDC27-216ENST00000574304 CYP26B1Q9NR63 512 aa7.51□□□□□ -1.21
CDC27-216ENST00000574304 TRBV23OR9-2A0A075B6M9 112 aa7.5□□□□□ -1.21
CDC27-216ENST00000574304 NPHP3-ACAD11A0A0J9YXS1 232 aa7.5□□□□□ -1.21
CDC27-216ENST00000574304 PLS3P13797 630 aa7.5□□□□□ -1.21
CDC27-216ENST00000574304 ERVFRD-1P60508 538 aa7.5□□□□□ -1.21
CDC27-216ENST00000574304 CPNE8Q86YQ8 564 aa7.5□□□□□ -1.21
CDC27-216ENST00000574304 ARMC5Q96C12 935 aa7.5□□□□□ -1.21
CDC27-216ENST00000574304 SLC26A8Q96RN1 970 aa7.5□□□□□ -1.21
CDC27-216ENST00000574304 HIRIP3Q9BW71 556 aaPredicted RBP7.5□□□□□ -1.21
CDC27-216ENST00000574304 KRTAP9-2Q9BYQ4 174 aa7.5□□□□□ -1.21
CDC27-216ENST00000574304 GOLGA2P5Q9HBQ8 144 aa7.5□□□□□ -1.21
CDC27-216ENST00000574304 CLEC1BQ9P126 229 aa7.5□□□□□ -1.21
CDC27-216ENST00000574304 THBDP07204 575 aa7.49□□□□□ -1.21
CDC27-216ENST00000574304 CORO7P57737 925 aa7.49□□□□□ -1.21
CDC27-216ENST00000574304 SF3A1Q15459 793 aaKnown RBP7.49□□□□□ -1.21
CDC27-216ENST00000574304 PKN1Q16512 942 aa7.49□□□□□ -1.21
CDC27-216ENST00000574304 NBPF6Q5VWK0 638 aa7.49□□□□□ -1.21
CDC27-216ENST00000574304 NLGN2Q8NFZ4 835 aa7.49□□□□□ -1.21
CDC27-216ENST00000574304 NBPF4Q96M43 638 aa7.49□□□□□ -1.21
CDC27-216ENST00000574304 PPP1R16BQ96T49 567 aa7.49□□□□□ -1.21
CDC27-216ENST00000574304 TNFRSF12AQ9NP84 129 aa7.49□□□□□ -1.21
CDC27-216ENST00000574304 PDLIM7Q9NR12 457 aa7.49□□□□□ -1.21
CDC27-216ENST00000574304 MYOCOSA0A1B0GUC4 107 aa7.48□□□□□ -1.21
CDC27-216ENST00000574304 A0A1W2PQJ5 194 aa7.48□□□□□ -1.21
CDC27-216ENST00000574304 PEX10O60683 326 aa7.48□□□□□ -1.21
CDC27-216ENST00000574304 MPOP05164 745 aa7.48□□□□□ -1.21
CDC27-216ENST00000574304 SNRPB2P08579 225 aaKnown RBP7.48□□□□□ -1.21
CDC27-216ENST00000574304 HOXC12P31275 282 aa7.48□□□□□ -1.21
CDC27-216ENST00000574304 CYP4F3Q08477 520 aa7.48□□□□□ -1.21
CDC27-216ENST00000574304 ST13P5Q8NFI4 369 aaPredicted RBP7.48□□□□□ -1.21
CDC27-216ENST00000574304 BHLHE22Q8NFJ8 381 aaPredicted RBP7.48□□□□□ -1.21
CDC27-216ENST00000574304 MCOLN1Q9GZU1 580 aa7.48□□□□□ -1.21
CDC27-216ENST00000574304 A0A1W2PQU0 124 aa7.47□□□□□ -1.21
CDC27-216ENST00000574304 HRKO00198 91 aa7.47□□□□□ -1.21
CDC27-216ENST00000574304 TACR1P25103 407 aa7.47□□□□□ -1.21
CDC27-216ENST00000574304 ECI1P42126 302 aa7.47□□□□□ -1.21
CDC27-216ENST00000574304 PPP2R2AP63151 447 aa7.47□□□□□ -1.21
CDC27-216ENST00000574304 RAB3GAP1Q15042 981 aa7.47□□□□□ -1.21
CDC27-216ENST00000574304 SF1Q15637 639 aaKnown RBP7.47□□□□□ -1.21
CDC27-216ENST00000574304 ZNF124Q15973 351 aa7.47□□□□□ -1.21
CDC27-216ENST00000574304 BICRALQ6AI39 1079 aa7.47□□□□□ -1.21
CDC27-216ENST00000574304 NPLOC4Q8TAT6 608 aa7.47□□□□□ -1.21
CDC27-216ENST00000574304 FRS2Q8WU20 508 aa7.47□□□□□ -1.21
CDC27-216ENST00000574304 CCDC140Q96MF4 163 aa7.47□□□□□ -1.21
CDC27-216ENST00000574304 MMP19Q99542 508 aa7.47□□□□□ -1.21
CDC27-216ENST00000574304 MSRB2Q9Y3D2 182 aa7.47□□□□□ -1.21
CDC27-216ENST00000574304 C7orf72A4D263 438 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 NUDT19A8MXV4 375 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.46□□□□□ -1.22
CDC27-216ENST00000574304 ABLIM1O14639 778 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 NPHS1O60500 1241 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 CAPNS1P04632 268 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 SCG5P05408 212 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 TMEM253P0C7T8 217 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 KCNJ6P48051 423 aa7.46□□□□□ -1.22
CDC27-216ENST00000574304 YBX1P67809 324 aaKnown RBP7.46□□□□□ -1.22
CDC27-216ENST00000574304 RBL2Q08999 1139 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms