RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 PNMA6FA0A0J9YX94 578 aa38.38■■■■□ 3.74
CTDNEP1-209ENST00000574205 ADD1P35611 737 aaKnown RBP38.38■■■■□ 3.74
CTDNEP1-209ENST00000574205 RABEP1Q15276 862 aa38.38■■■■□ 3.74
CTDNEP1-209ENST00000574205 USH1GQ495M9 461 aa38.38■■■■□ 3.74
CTDNEP1-209ENST00000574205 CCDC82Q8N4S0 544 aa38.38■■■■□ 3.74
CTDNEP1-209ENST00000574205 HTTP42858 3142 aa38.38■■■■□ 3.73
CTDNEP1-209ENST00000574205 TAL1P17542 331 aaPredicted RBP38.38■■■■□ 3.73
CTDNEP1-209ENST00000574205 RGS2P41220 211 aa38.38■■■■□ 3.73
CTDNEP1-209ENST00000574205 SEC63Q9UGP8 760 aaKnown RBP38.38■■■■□ 3.73
CTDNEP1-209ENST00000574205 ABCB11O95342 1321 aa38.37■■■■□ 3.73
CTDNEP1-209ENST00000574205 TRAF1Q13077 416 aa38.37■■■■□ 3.73
CTDNEP1-209ENST00000574205 MUM1L1Q5H9M0 696 aa38.37■■■■□ 3.73
CTDNEP1-209ENST00000574205 IL27Q8NEV9 243 aa38.37■■■■□ 3.73
CTDNEP1-209ENST00000574205 TPCN1Q9ULQ1 816 aa38.37■■■■□ 3.73
CTDNEP1-209ENST00000574205 CNTNAP5Q8WYK1 1306 aa38.36■■■■□ 3.73
CTDNEP1-209ENST00000574205 XRCC5P13010 732 aaKnown RBP38.36■■■■□ 3.73
CTDNEP1-209ENST00000574205 CCT2P78371 535 aaKnown RBP38.36■■■■□ 3.73
CTDNEP1-209ENST00000574205 PPP1R11O60927 126 aaPredicted RBP38.35■■■■□ 3.73
CTDNEP1-209ENST00000574205 HOXC6P09630 235 aa38.35■■■■□ 3.73
CTDNEP1-209ENST00000574205 CYP2B6P20813 491 aa38.35■■■■□ 3.73
CTDNEP1-209ENST00000574205 FUT2Q10981 343 aa38.35■■■■□ 3.73
CTDNEP1-209ENST00000574205 DPP9Q86TI2 863 aa38.35■■■■□ 3.73
CTDNEP1-209ENST00000574205 ANKRD35Q8N283 1001 aa38.35■■■■□ 3.73
CTDNEP1-209ENST00000574205 PIBF1Q8WXW3 757 aa38.35■■■■□ 3.73
CTDNEP1-209ENST00000574205 APBA2Q99767 749 aa38.35■■■■□ 3.73
CTDNEP1-209ENST00000574205 SLC5A4Q9NY91 659 aa38.34■■■■□ 3.73
CTDNEP1-209ENST00000574205 PXYLP1Q8TE99 480 aa38.33■■■■□ 3.73
CTDNEP1-209ENST00000574205 DDX11Q96FC9 970 aa38.33■■■■□ 3.73
CTDNEP1-209ENST00000574205 NCOA5Q9HCD5 579 aaKnown RBP38.33■■■■□ 3.73
CTDNEP1-209ENST00000574205 PCDHA1Q9Y5I3 950 aa38.33■■■■□ 3.73
CTDNEP1-209ENST00000574205 STK3Q13188 491 aa38.33■■■■□ 3.73
CTDNEP1-209ENST00000574205 CLEC4DQ8WXI8 215 aa38.33■■■■□ 3.73
CTDNEP1-209ENST00000574205 A1CFQ9NQ94 594 aaKnown RBP38.33■■■■□ 3.73
CTDNEP1-209ENST00000574205 PFASO15067 1338 aa38.32■■■■□ 3.72
CTDNEP1-209ENST00000574205 NFIBO00712 420 aa38.32■■■■□ 3.72
CTDNEP1-209ENST00000574205 ADCY3O60266 1144 aa38.32■■■■□ 3.72
CTDNEP1-209ENST00000574205 NOL8Q76FK4 1167 aaKnown RBP38.32■■■■□ 3.72
CTDNEP1-209ENST00000574205 SLAIN1Q8ND83 568 aa38.32■■■■□ 3.72
CTDNEP1-209ENST00000574205 SLKQ9H2G2 1235 aaPredicted RBP38.32■■■■□ 3.72
CTDNEP1-209ENST00000574205 MRPL11Q9Y3B7 192 aaKnown RBP38.32■■■■□ 3.72
CTDNEP1-209ENST00000574205 COBLO75128 1261 aa38.31■■■■□ 3.72
CTDNEP1-209ENST00000574205 PLXNA1Q9UIW2 1896 aa38.31■■■■□ 3.72
CTDNEP1-209ENST00000574205 PGK2P07205 417 aa38.3■■■■□ 3.72
CTDNEP1-209ENST00000574205 GRK4P32298 578 aa38.3■■■■□ 3.72
CTDNEP1-209ENST00000574205 NTRK3Q16288 839 aa38.3■■■■□ 3.72
CTDNEP1-209ENST00000574205 DNAJC25-GNG10A0A024R161 153 aa38.29■■■■□ 3.72
CTDNEP1-209ENST00000574205 PFKFB2O60825 505 aa38.29■■■■□ 3.72
CTDNEP1-209ENST00000574205 SLC9C1Q4G0N8 1177 aa38.29■■■■□ 3.72
CTDNEP1-209ENST00000574205 NSMFQ6X4W1 530 aa38.29■■■■□ 3.72
CTDNEP1-209ENST00000574205 TRMT44Q8IYL2 757 aaKnown RBP38.29■■■■□ 3.72
CTDNEP1-209ENST00000574205 ST18O60284 1047 aa38.28■■■■□ 3.72
CTDNEP1-209ENST00000574205 IFNAR1P17181 557 aa38.28■■■■□ 3.72
CTDNEP1-209ENST00000574205 NPLOC4Q8TAT6 608 aa38.28■■■■□ 3.72
CTDNEP1-209ENST00000574205 MAF1Q9H063 256 aa38.28■■■■□ 3.72
CTDNEP1-209ENST00000574205 CYP39A1Q9NYL5 469 aa38.28■■■■□ 3.72
CTDNEP1-209ENST00000574205 DIS3Q9Y2L1 958 aaKnown RBP38.28■■■■□ 3.72
CTDNEP1-209ENST00000574205 V9GY48 417 aaPredicted RBP38.28■■■■□ 3.72
CTDNEP1-209ENST00000574205 RBBP6Q7Z6E9 1792 aaKnown RBP38.28■■■■□ 3.72
CTDNEP1-209ENST00000574205 hCG_1642624A0A1W2PR95 340 aa38.28■■■■□ 3.72
CTDNEP1-209ENST00000574205 CPLX1O14810 134 aa38.28■■■■□ 3.72
CTDNEP1-209ENST00000574205 SCRN1Q12765 414 aa38.28■■■■□ 3.72
CTDNEP1-209ENST00000574205 ME3Q16798 604 aa38.28■■■■□ 3.72
CTDNEP1-209ENST00000574205 RGS22Q8NE09 1264 aa38.28■■■■□ 3.72
CTDNEP1-209ENST00000574205 LIMCH1Q9UPQ0 1083 aa38.28■■■■□ 3.72
CTDNEP1-209ENST00000574205 ELNP15502 786 aa38.27■■■■□ 3.72
CTDNEP1-209ENST00000574205 ZNF792Q3KQV3 632 aa38.27■■■■□ 3.72
CTDNEP1-209ENST00000574205 CPLX2Q6PUV4 134 aaKnown RBP38.27■■■■□ 3.72
CTDNEP1-209ENST00000574205 MCF2L2Q86YR7 1114 aa38.27■■■■□ 3.72
CTDNEP1-209ENST00000574205 RBM27Q9P2N5 1060 aaKnown RBP38.27■■■■□ 3.72
CTDNEP1-209ENST00000574205 CENPFP49454 3210 aa38.27■■■■□ 3.72
CTDNEP1-209ENST00000574205 TRIB2Q92519 343 aa38.26■■■■□ 3.72
CTDNEP1-209ENST00000574205 RNF207Q6ZRF8 634 aa38.25■■■■□ 3.71
CTDNEP1-209ENST00000574205 RNF26Q9BY78 433 aaPredicted RBP38.25■■■■□ 3.71
CTDNEP1-209ENST00000574205 PTPDC1A2A3K4 754 aa38.24■■■■□ 3.71
CTDNEP1-209ENST00000574205 BAATQ14032 418 aaPredicted RBP38.24■■■■□ 3.71
CTDNEP1-209ENST00000574205 CCL14Q16627 93 aa38.24■■■■□ 3.71
CTDNEP1-209ENST00000574205 SH3TC2Q8TF17 1288 aa38.24■■■■□ 3.71
CTDNEP1-209ENST00000574205 PHKBQ93100 1093 aa38.24■■■■□ 3.71
CTDNEP1-209ENST00000574205 MAML3Q96JK9 1138 aa38.24■■■■□ 3.71
CTDNEP1-209ENST00000574205 POTEB2H3BUK9 544 aa38.23■■■■□ 3.71
CTDNEP1-209ENST00000574205 LARGE1O95461 756 aa38.23■■■■□ 3.71
CTDNEP1-209ENST00000574205 HMGCRP04035 888 aa38.23■■■■□ 3.71
CTDNEP1-209ENST00000574205 TNS4Q8IZW8 715 aa38.23■■■■□ 3.71
CTDNEP1-209ENST00000574205 FAM133AQ8N9E0 248 aa38.23■■■■□ 3.71
CTDNEP1-209ENST00000574205 PRPF3O43395 683 aaKnown RBP38.22■■■■□ 3.71
CTDNEP1-209ENST00000574205 RPS6P62753 249 aaKnown RBP38.22■■■■□ 3.71
CTDNEP1-209ENST00000574205 AKAP17AQ02040 695 aaKnown RBP38.22■■■■□ 3.71
CTDNEP1-209ENST00000574205 OLFML2BQ68BL8 750 aa38.22■■■■□ 3.71
CTDNEP1-209ENST00000574205 hCG_1984214I3L0E3 225 aa38.22■■■■□ 3.71
CTDNEP1-209ENST00000574205 OPLAHO14841 1288 aa38.22■■■■□ 3.71
CTDNEP1-209ENST00000574205 HEATR3Q7Z4Q2 680 aa38.22■■■■□ 3.71
CTDNEP1-209ENST00000574205 ZNF713Q8N859 430 aaPredicted RBP38.22■■■■□ 3.71
CTDNEP1-209ENST00000574205 GTF3C6Q969F1 213 aa38.22■■■■□ 3.71
CTDNEP1-209ENST00000574205 ARMC5Q96C12 935 aa38.22■■■■□ 3.71
CTDNEP1-209ENST00000574205 FLRT1Q9NZU1 646 aa38.22■■■■□ 3.71
CTDNEP1-209ENST00000574205 LCTP09848 1927 aa38.21■■■■□ 3.71
CTDNEP1-209ENST00000574205 CDKL5O76039 1030 aa38.21■■■■□ 3.71
CTDNEP1-209ENST00000574205 PFKFB3Q16875 520 aaPredicted RBP38.21■■■■□ 3.71
CTDNEP1-209ENST00000574205 SLC30A10Q6XR72 485 aa38.21■■■■□ 3.71
CTDNEP1-209ENST00000574205 TRIM22Q8IYM9 498 aa38.21■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms