RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 BRPF3Q9ULD4 1205 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 ABCB11O95342 1321 aa14.81□□□□□ -0.04
TRAPPC1-206ENST00000573989 PNMA6FA0A0J9YX94 578 aa14.8□□□□□ -0.04
TRAPPC1-206ENST00000573989 USH1GQ495M9 461 aa14.8□□□□□ -0.04
TRAPPC1-206ENST00000573989 MFSD14CQ5VZR4 134 aa14.8□□□□□ -0.04
TRAPPC1-206ENST00000573989 HOMER1Q86YM7 354 aa14.8□□□□□ -0.04
TRAPPC1-206ENST00000573989 SH3TC2Q8TF17 1288 aa14.8□□□□□ -0.04
TRAPPC1-206ENST00000573989 MTMR8Q96EF0 704 aa14.8□□□□□ -0.04
TRAPPC1-206ENST00000573989 DIS3Q9Y2L1 958 aaKnown RBP14.8□□□□□ -0.04
TRAPPC1-206ENST00000573989 MRPL11Q9Y3B7 192 aaKnown RBP14.8□□□□□ -0.04
TRAPPC1-206ENST00000573989 ELNP15502 786 aa14.79□□□□□ -0.04
TRAPPC1-206ENST00000573989 OLFML2BQ68BL8 750 aa14.79□□□□□ -0.04
TRAPPC1-206ENST00000573989 NSMFQ6X4W1 530 aa14.79□□□□□ -0.04
TRAPPC1-206ENST00000573989 RBBP6Q7Z6E9 1792 aaKnown RBP14.79□□□□□ -0.04
TRAPPC1-206ENST00000573989 MCF2L2Q86YR7 1114 aa14.79□□□□□ -0.04
TRAPPC1-206ENST00000573989 RAB11FIP4Q86YS3 637 aa14.79□□□□□ -0.04
TRAPPC1-206ENST00000573989 ZNF333Q96JL9 665 aa14.79□□□□□ -0.04
TRAPPC1-206ENST00000573989 PIGSQ96S52 555 aa14.79□□□□□ -0.04
TRAPPC1-206ENST00000573989 TMEM106CQ9BVX2 250 aa14.79□□□□□ -0.04
TRAPPC1-206ENST00000573989 ALDH8A1Q9H2A2 487 aaPredicted RBP14.79□□□□□ -0.04
TRAPPC1-206ENST00000573989 POTEB2H3BUK9 544 aa14.78□□□□□ -0.04
TRAPPC1-206ENST00000573989 CYTH3O43739 400 aa14.78□□□□□ -0.04
TRAPPC1-206ENST00000573989 INHAP05111 366 aa14.78□□□□□ -0.04
TRAPPC1-206ENST00000573989 PGK2P07205 417 aa14.78□□□□□ -0.04
TRAPPC1-206ENST00000573989 EVCP57679 992 aa14.78□□□□□ -0.04
TRAPPC1-206ENST00000573989 TOB2Q14106 344 aaPredicted RBP14.78□□□□□ -0.04
TRAPPC1-206ENST00000573989 TMTC3Q6ZXV5 915 aa14.78□□□□□ -0.04
TRAPPC1-206ENST00000573989 IL27Q8NEV9 243 aa14.78□□□□□ -0.04
TRAPPC1-206ENST00000573989 TRIB2Q92519 343 aa14.78□□□□□ -0.04
TRAPPC1-206ENST00000573989 ZNF274Q96GC6 653 aaPredicted RBP14.78□□□□□ -0.04
TRAPPC1-206ENST00000573989 MPHOSPH6Q99547 160 aaKnown RBP14.78□□□□□ -0.04
TRAPPC1-206ENST00000573989 A1CFQ9NQ94 594 aaKnown RBP14.78□□□□□ -0.04
TRAPPC1-206ENST00000573989 PCDHA1Q9Y5I3 950 aa14.78□□□□□ -0.04
TRAPPC1-206ENST00000573989 NID2Q14112 1375 aa14.77□□□□□ -0.04
TRAPPC1-206ENST00000573989 PTPDC1A2A3K4 754 aa14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 CCDC85CA6NKD9 419 aa14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 COBLO75128 1261 aa14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 PLEKHA8P1O95397 391 aa14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 RBM25P49756 843 aaKnown RBP14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 NEK4P51957 841 aa14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 ZNF792Q3KQV3 632 aa14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 MUM1L1Q5H9M0 696 aa14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 CPLX2Q6PUV4 134 aaKnown RBP14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 RNF207Q6ZRF8 634 aa14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 CCDC82Q8N4S0 544 aa14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 SRBD1Q8N5C6 995 aaKnown RBP14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 MSL3Q8N5Y2 521 aaKnown RBP14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 RGS22Q8NE09 1264 aa14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 NPLOC4Q8TAT6 608 aa14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 MAML3Q96JK9 1138 aa14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 MAP3K20Q9NYL2 800 aaKnown RBP14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 CYP39A1Q9NYL5 469 aa14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 RBM27Q9P2N5 1060 aaKnown RBP14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 ADD3Q9UEY8 706 aaKnown RBP14.77□□□□□ -0.05
TRAPPC1-206ENST00000573989 DNAJC25-GNG10A0A024R161 153 aa14.76□□□□□ -0.05
TRAPPC1-206ENST00000573989 B4DLN1 442 aa14.76□□□□□ -0.05
TRAPPC1-206ENST00000573989 CPLX1O14810 134 aa14.76□□□□□ -0.05
TRAPPC1-206ENST00000573989 PDIA3P30101 505 aaKnown RBP14.76□□□□□ -0.05
TRAPPC1-206ENST00000573989 MRPL12P52815 198 aaKnown RBP14.76□□□□□ -0.05
TRAPPC1-206ENST00000573989 AKAP17AQ02040 695 aaKnown RBP14.76□□□□□ -0.05
TRAPPC1-206ENST00000573989 CCL14Q16627 93 aa14.76□□□□□ -0.05
TRAPPC1-206ENST00000573989 ZNF467Q7Z7K2 595 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC1-206ENST00000573989 CMTR1Q8N1G2 835 aaKnown RBP14.76□□□□□ -0.05
TRAPPC1-206ENST00000573989 SAMD3Q8N6K7 520 aa14.76□□□□□ -0.05
TRAPPC1-206ENST00000573989 PIBF1Q8WXW3 757 aa14.76□□□□□ -0.05
TRAPPC1-206ENST00000573989 HMX1Q9NP08 348 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC1-206ENST00000573989 RPTORQ8N122 1335 aa14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 LOC102724159A0A0B4J2E5 919 aa14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 ASB14A6NK59 587 aa14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 hCG_1984214I3L0E3 225 aa14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 NFIBO00712 420 aa14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 PRKAR2AP13861 404 aaKnown RBP14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 CAPN2P17655 700 aa14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 CDC27P30260 824 aa14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 BAATQ14032 418 aaPredicted RBP14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 PWP2Q15269 919 aaKnown RBP14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 ZNF713Q8N859 430 aaPredicted RBP14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 CLEC4DQ8WXI8 215 aa14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 TINF2Q9BSI4 451 aa14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 BACH2Q9BYV9 841 aa14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 RNF208Q9H0X6 261 aa14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 NRBP1Q9UHY1 535 aa14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 CNPY2Q9Y2B0 182 aa14.75□□□□□ -0.05
TRAPPC1-206ENST00000573989 CNTNAP5Q8WYK1 1306 aa14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 SYNGAP1Q96PV0 1343 aa14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 MYCP01106 439 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 CCL5P13501 91 aa14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 TAL1P17542 331 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 CALML3P27482 149 aa14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 ADD1P35611 737 aaKnown RBP14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 AK2P54819 239 aa14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 RPS6P62753 249 aaKnown RBP14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 CCT2P78371 535 aaKnown RBP14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 CACNB2Q08289 660 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 SLC35G1Q2M3R5 365 aa14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 FAM133AQ8N9E0 248 aa14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 DNERQ8NFT8 737 aa14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 SLKQ9H2G2 1235 aaPredicted RBP14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 FLRT1Q9NZU1 646 aa14.74□□□□□ -0.05
TRAPPC1-206ENST00000573989 KIAA0100Q14667 2235 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms