RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 DAGLBQ8NCG7 672 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 P2RX5Q93086 422 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 CNOT6LQ96LI5 555 aaKnown RBP21.32■■□□□ 1
SCARF1-206ENST00000573852 FAM204AQ9H8W3 233 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 EIF3CLB5ME19 914 aaKnown RBP21.32■■□□□ 1
SCARF1-206ENST00000573852 CCNE1P24864 410 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 TNNT3P45378 269 aaPredicted RBP21.32■■□□□ 1
SCARF1-206ENST00000573852 ZBED6P86452 979 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 C12orf60Q5U649 245 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 ANKS1AQ92625 1134 aa21.32■■□□□ 1
SCARF1-206ENST00000573852 EIF3CQ99613 913 aaKnown RBP21.32■■□□□ 1
SCARF1-206ENST00000573852 ZNHIT6Q9NWK9 470 aaKnown RBP21.32■■□□□ 1
SCARF1-206ENST00000573852 WNK3Q9BYP7 1800 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 MYO1CO00159 1063 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 AARSP49588 968 aaKnown RBP eCLIP21.31■■□□□ 1
SCARF1-206ENST00000573852 PDE4DQ08499 809 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 DDB1Q16531 1140 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 MIIPQ5JXC2 388 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 CABP7Q86V35 215 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 MARCH10Q8NA82 808 aaPredicted RBP21.31■■□□□ 1
SCARF1-206ENST00000573852 EHBP1Q8NDI1 1231 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 NUP58Q9BVL2 599 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 TRIM9Q9C026 710 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 TSPYL1Q9H0U9 437 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 BARHL2Q9NY43 387 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 HPCAL4Q9UM19 191 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 MYH1P12882 1939 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 TRIM66O15016 1216 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 RNF40O75150 1001 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 RPS6KA5O75582 802 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 SLC20A2Q08357 652 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 TXNRD1Q16881 649 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 TXNRD3Q86VQ6 643 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 CCDC170Q8IYT3 715 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 GDAP1L1Q96MZ0 367 aa21.31■■□□□ 1
SCARF1-206ENST00000573852 MKRN1Q9UHC7 482 aaKnown RBP21.31■■□□□ 1
SCARF1-206ENST00000573852 ZC3H4Q9UPT8 1303 aaKnown RBP21.3■■□□□ 1
SCARF1-206ENST00000573852 TARSL2A2RTX5 802 aaKnown RBP21.3■■□□□ 1
SCARF1-206ENST00000573852 FCER1AP12319 257 aa21.3■■□□□ 1
SCARF1-206ENST00000573852 PRPHP41219 470 aa21.3■■□□□ 1
SCARF1-206ENST00000573852 RPS8P62241 208 aaKnown RBP21.3■■□□□ 1
SCARF1-206ENST00000573852 SEMA3FQ13275 785 aa21.3■■□□□ 1
SCARF1-206ENST00000573852 CCDC178Q5BJE1 867 aa21.3■■□□□ 1
SCARF1-206ENST00000573852 RETREG2Q8NC44 543 aa21.3■■□□□ 1
SCARF1-206ENST00000573852 ZFP91Q96JP5 570 aaPredicted RBP21.3■■□□□ 1
SCARF1-206ENST00000573852 PCMTD1Q96MG8 357 aaPredicted RBP21.3■■□□□ 1
SCARF1-206ENST00000573852 MACROD2A1Z1Q3 448 aa21.3■■□□□ 1
SCARF1-206ENST00000573852 LAD1O00515 517 aa21.3■■□□□ 1
SCARF1-206ENST00000573852 MYBL2P10244 700 aa21.3■■□□□ 1
SCARF1-206ENST00000573852 MTIF2P46199 727 aaKnown RBP21.3■■□□□ 1
SCARF1-206ENST00000573852 GNAQP50148 359 aa21.3■■□□□ 1
SCARF1-206ENST00000573852 CKAP4Q07065 602 aaKnown RBP21.3■■□□□ 1
SCARF1-206ENST00000573852 SRLQ86TD4 932 aa21.3■■□□□ 1
SCARF1-206ENST00000573852 PURBQ96QR8 312 aaKnown RBP21.3■■□□□ 1
SCARF1-206ENST00000573852 ZNF263O14978 683 aa21.29■■□□□ 1
SCARF1-206ENST00000573852 MCM3P25205 808 aa21.29■■□□□ 1
SCARF1-206ENST00000573852 GALNT17Q6IS24 598 aa21.29■■□□□ 1
SCARF1-206ENST00000573852 SMIM5Q71RC9 77 aa21.29■■□□□ 1
SCARF1-206ENST00000573852 GSPT2Q8IYD1 628 aaKnown RBP21.29■■□□□ 1
SCARF1-206ENST00000573852 RPGRIP1Q96KN7 1286 aa21.29■■□□□ 1
SCARF1-206ENST00000573852 NOC4LQ9BVI4 516 aaKnown RBP21.29■■□□□ 1
SCARF1-206ENST00000573852 RRP15Q9Y3B9 282 aaKnown RBP21.29■■□□□ 1
SCARF1-206ENST00000573852 PRPF6O94906 941 aaKnown RBP21.29■■□□□ 1
SCARF1-206ENST00000573852 IVLP07476 585 aa21.29■■□□□ 1
SCARF1-206ENST00000573852 MAP9Q49MG5 647 aa21.29■■□□□ 1
SCARF1-206ENST00000573852 CAGE1Q8TC20 777 aa21.29■■□□□ 1
SCARF1-206ENST00000573852 COG1Q8WTW3 980 aa21.29■■□□□ 1
SCARF1-206ENST00000573852 HPS3Q969F9 1004 aa21.29■■□□□ 1
SCARF1-206ENST00000573852 CPVLQ9H3G5 476 aa21.29■■□□□ 1
SCARF1-206ENST00000573852 CUEDC2Q9H467 287 aa21.29■■□□□ 1
SCARF1-206ENST00000573852 CCDC88AQ3V6T2 1871 aa21.28■■□□□ 1
SCARF1-206ENST00000573852 BICDL2A1A5D9 508 aa21.28■■□□□ 1
SCARF1-206ENST00000573852 IPO7O95373 1038 aaKnown RBP21.28■■□□□ 1
SCARF1-206ENST00000573852 PLEKP08567 350 aaPredicted RBP21.28■■□□□ 1
SCARF1-206ENST00000573852 GOLGA8HP0CJ92 632 aa21.28■■□□□ 1
SCARF1-206ENST00000573852 IDEP14735 1019 aa21.28■■□□□ 1
SCARF1-206ENST00000573852 ASIC1P78348 528 aa21.28■■□□□ 1
SCARF1-206ENST00000573852 KRT26Q7Z3Y9 468 aa21.28■■□□□ 1
SCARF1-206ENST00000573852 C10orf67Q8IYJ2 551 aa21.28■■□□□ 1
SCARF1-206ENST00000573852 MKNK2Q9HBH9 465 aa21.28■■□□□ 1
SCARF1-206ENST00000573852 TCP11L1Q9NUJ3 509 aa21.28■■□□□ 1
SCARF1-206ENST00000573852 ANO9A1A5B4 782 aa21.28■■□□□ 1
SCARF1-206ENST00000573852 LRRC31Q6UY01 552 aa21.28■■□□□ 1
SCARF1-206ENST00000573852 DZIP1Q86YF9 867 aaKnown RBP21.28■■□□□ 1
SCARF1-206ENST00000573852 ZSCAN29Q8IWY8 852 aaPredicted RBP21.28■■□□□ 1
SCARF1-206ENST00000573852 SLC44A5Q8NCS7 719 aa21.28■■□□□ 1
SCARF1-206ENST00000573852 RIN2Q8WYP3 895 aaPredicted RBP21.28■■□□□ 1
SCARF1-206ENST00000573852 C7orf25Q9BPX7 421 aa21.28■■□□□ 1
SCARF1-206ENST00000573852 JADE2Q9NQC1 790 aa21.28■■□□□ 1
SCARF1-206ENST00000573852 MAPK8IP2Q13387 824 aaPredicted RBP21.27■■□□□ 1
SCARF1-206ENST00000573852 LETM2Q2VYF4 491 aa21.27■■□□□ 1
SCARF1-206ENST00000573852 SLC10A5Q5PT55 438 aa21.27■■□□□ 1
SCARF1-206ENST00000573852 TBC1D9BQ66K14 1250 aa21.27■■□□□ 1
SCARF1-206ENST00000573852 SH3RF3Q8TEJ3 882 aaPredicted RBP21.27■■□□□ 1
SCARF1-206ENST00000573852 SMCR8Q8TEV9 937 aaPredicted RBP21.27■■□□□ 1
SCARF1-206ENST00000573852 ERGIC2Q96RQ1 377 aa21.27■■□□□ 1
SCARF1-206ENST00000573852 MAGEF1Q9HAY2 307 aa21.27■■□□□ 1
SCARF1-206ENST00000573852 LRWD1Q9UFC0 647 aa21.27■■□□□ 1
SCARF1-206ENST00000573852 STRCQ7RTU9 1775 aa21.27■■□□□ 1
SCARF1-206ENST00000573852 PALM3A6NDB9 673 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms