RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 COL9A3Q14050 684 aaPredicted RBP11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 SGSM1Q2NKQ1 1148 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 SH2D4BQ5SQS7 431 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 IFFO2Q5TF58 517 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 P3H4Q92791 437 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 ZNF653Q96CK0 615 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 HAUS7Q99871 368 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 TAOK3Q9H2K8 898 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 SLC52A2Q9HAB3 445 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 DBNLQ9UJU6 430 aaKnown RBP11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 CHMP3Q9Y3E7 222 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 XIRP1Q702N8 1843 aaKnown RBP11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 SRRM3A6NNA2 597 aaPredicted RBP11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 GOLGA8KD6RF30 607 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 DNAJC8O75937 253 aaPredicted RBP11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 HOXD10P28358 340 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 RFX5P48382 616 aaPredicted RBP11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 GNG11P61952 73 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 PIP4K2BP78356 416 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 HDLBPQ00341 1268 aaKnown RBP11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 STK3Q13188 491 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 STIM1Q13586 685 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 MCMDC2Q4G0Z9 681 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 Q6ZUG5 572 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 USP33Q8TEY7 942 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 DHX58Q96C10 678 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 TRAPPC9Q96Q05 1148 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 TFIP11Q9UBB9 837 aaKnown RBP11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 MAGEC2Q9UBF1 373 aaPredicted RBP11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 UBR2Q8IWV8 1755 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 VWA3AA6NCI4 1184 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 CBFA2T2O43439 604 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 PFKFB2O60825 505 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 STK10O94804 968 aaKnown RBP11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 LMOD2Q6P5Q4 547 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 RSPH3Q86UC2 560 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 KLHDC4Q8TBB5 520 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 XAGE3Q8WTP9 111 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 SREK1Q8WXA9 508 aaKnown RBP11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 RSPH1Q8WYR4 309 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 KIFC2Q96AC6 838 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 HVCN1Q96D96 273 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 DHTKD1Q96HY7 919 aaPredicted RBP11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 MYD88Q99836 296 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 DAAM1Q9Y4D1 1078 aa11.62□□□□□ -0.55
CHRNB1-205ENST00000573209 N4BP3O15049 544 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 JAK2O60674 1132 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 PFDN1O60925 122 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 DTNBO60941 627 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 HOXD12P35452 270 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 SH3BGRP55822 239 aaPredicted RBP11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 GUCY1B3Q02153 619 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 PTPN12Q05209 780 aaKnown RBP11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 STX1AQ16623 288 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 EPHA10Q5JZY3 1008 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 EMC10Q5UCC4 262 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 NAA35Q5VZE5 725 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 MSL1Q68DK7 614 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 PI16Q6UXB8 463 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 MAATS1Q7Z4T9 603 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 LRRC49Q8IUZ0 686 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 ZMAT2Q96NC0 199 aaKnown RBP11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 EHD4Q9H223 541 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 SH3GLB1Q9Y371 365 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 STK24Q9Y6E0 443 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 ZC3H4Q9UPT8 1303 aaKnown RBP11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 TARSL2A2RTX5 802 aaKnown RBP11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 DPPA5A6NC42 116 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 UBAP1LF5GYI3 381 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 MLH1P40692 756 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 TSR1Q2NL82 804 aaKnown RBP11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 C6orf89Q6UWU4 347 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 NAP1L3Q99457 506 aaPredicted RBP11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 NDNQ99608 321 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 VCX3BQ9H321 246 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 VCX3AQ9NNX9 186 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 BAIAP2L1Q9UHR4 511 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 L3MBTL1Q9Y468 752 aa11.61□□□□□ -0.55
CHRNB1-205ENST00000573209 CYP21A2P08686 494 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 ADRA2BP18089 450 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 TFCP2Q12800 502 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 CLEC4GQ6UXB4 293 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 ANKRD13DQ6ZTN6 518 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 COPS6Q7L5N1 327 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 LRP10Q7Z4F1 713 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 KBTBD3Q8NAB2 608 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 COG1Q8WTW3 980 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 L3MBTL3Q96JM7 780 aaPredicted RBP11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 DSCC1Q9BVC3 393 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 AGXT2Q9BYV1 514 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 EPN3Q9H201 632 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 GOLPH3LQ9H4A5 285 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 RCOR1Q9UKL0 485 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 SUGT1Q9Y2Z0 365 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 A0A1B0GVL5 298 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 CLTAP09496 248 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 MSL3P1P0C860 447 aa11.6□□□□□ -0.55
CHRNB1-205ENST00000573209 LACTB2Q53H82 288 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms