RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 CCDC178Q5BJE1 867 aa24.4■■□□□ 1.5
CHRNB1-204ENST00000572857 KLHDC9Q8NEP7 349 aa24.4■■□□□ 1.5
CHRNB1-204ENST00000572857 ZSCAN10Q96SZ4 725 aaPredicted RBP24.4■■□□□ 1.5
CHRNB1-204ENST00000572857 TSEN34Q9BSV6 310 aaKnown RBP24.4■■□□□ 1.5
CHRNB1-204ENST00000572857 KAT14Q9H8E8 782 aa24.4■■□□□ 1.5
CHRNB1-204ENST00000572857 SPC25Q9HBM1 224 aa24.4■■□□□ 1.5
CHRNB1-204ENST00000572857 ZSWIM5Q9P217 1185 aa24.4■■□□□ 1.5
CHRNB1-204ENST00000572857 DNAH12Q6ZR08 3092 aa24.39■■□□□ 1.5
CHRNB1-204ENST00000572857 BAATQ14032 418 aaPredicted RBP24.39■■□□□ 1.49
CHRNB1-204ENST00000572857 C1orf53Q5VUE5 145 aa24.39■■□□□ 1.49
CHRNB1-204ENST00000572857 PNMA1Q8ND90 353 aa24.39■■□□□ 1.49
CHRNB1-204ENST00000572857 KRT23Q9C075 422 aa24.39■■□□□ 1.49
CHRNB1-204ENST00000572857 UBA5Q9GZZ9 404 aa24.39■■□□□ 1.49
CHRNB1-204ENST00000572857 KATNBL1Q9H079 304 aa24.39■■□□□ 1.49
CHRNB1-204ENST00000572857 ASTN1O14525 1302 aa24.38■■□□□ 1.49
CHRNB1-204ENST00000572857 NFIBO00712 420 aa24.38■■□□□ 1.49
CHRNB1-204ENST00000572857 NT5C2P49902 561 aa24.38■■□□□ 1.49
CHRNB1-204ENST00000572857 TNFAIP2Q03169 654 aa24.38■■□□□ 1.49
CHRNB1-204ENST00000572857 GPATCH4Q5T3I0 446 aaKnown RBP24.38■■□□□ 1.49
CHRNB1-204ENST00000572857 EEPD1Q7L9B9 569 aa24.38■■□□□ 1.49
CHRNB1-204ENST00000572857 SH3RF1Q7Z6J0 888 aa24.38■■□□□ 1.49
CHRNB1-204ENST00000572857 NUP133Q8WUM0 1156 aa24.38■■□□□ 1.49
CHRNB1-204ENST00000572857 RUFY2Q8WXA3 655 aa24.38■■□□□ 1.49
CHRNB1-204ENST00000572857 CPVLQ9H3G5 476 aa24.38■■□□□ 1.49
CHRNB1-204ENST00000572857 STARD7Q9NQZ5 370 aa24.38■■□□□ 1.49
CHRNB1-204ENST00000572857 PDLIM7Q9NR12 457 aa24.38■■□□□ 1.49
CHRNB1-204ENST00000572857 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.37■■□□□ 1.49
CHRNB1-204ENST00000572857 PTPDC1A2A3K4 754 aa24.37■■□□□ 1.49
CHRNB1-204ENST00000572857 PQBP1O60828 265 aaKnown RBP24.37■■□□□ 1.49
CHRNB1-204ENST00000572857 CHMLP26374 656 aa24.37■■□□□ 1.49
CHRNB1-204ENST00000572857 GNASQ5JWF2 1037 aa24.37■■□□□ 1.49
CHRNB1-204ENST00000572857 ENAHQ8N8S7 591 aaPredicted RBP24.37■■□□□ 1.49
CHRNB1-204ENST00000572857 VTI1AQ96AJ9 217 aa24.37■■□□□ 1.49
CHRNB1-204ENST00000572857 UBAC1Q9BSL1 405 aa24.37■■□□□ 1.49
CHRNB1-204ENST00000572857 CNNM2Q9H8M5 875 aa24.37■■□□□ 1.49
CHRNB1-204ENST00000572857 TRIM43BA6NCK2 446 aa24.36■■□□□ 1.49
CHRNB1-204ENST00000572857 MOXD2PA6NHM9 499 aa24.36■■□□□ 1.49
CHRNB1-204ENST00000572857 GJA9P57773 515 aa24.36■■□□□ 1.49
CHRNB1-204ENST00000572857 LRIT3Q3SXY7 679 aa24.36■■□□□ 1.49
CHRNB1-204ENST00000572857 CCSAPQ6IQ19 270 aaPredicted RBP24.36■■□□□ 1.49
CHRNB1-204ENST00000572857 PCSK9Q8NBP7 692 aaKnown RBP24.36■■□□□ 1.49
CHRNB1-204ENST00000572857 ANKS1AQ92625 1134 aa24.36■■□□□ 1.49
CHRNB1-204ENST00000572857 TRIM43Q96BQ3 446 aaPredicted RBP24.36■■□□□ 1.49
CHRNB1-204ENST00000572857 PDGFCQ9NRA1 345 aa24.36■■□□□ 1.49
CHRNB1-204ENST00000572857 TNKSO95271 1327 aa24.35■■□□□ 1.49
CHRNB1-204ENST00000572857 CALML3P27482 149 aa24.35■■□□□ 1.49
CHRNB1-204ENST00000572857 FBXO16Q8IX29 292 aaPredicted RBP24.35■■□□□ 1.49
CHRNB1-204ENST00000572857 CLEC4DQ8WXI8 215 aa24.35■■□□□ 1.49
CHRNB1-204ENST00000572857 BADQ92934 168 aa24.35■■□□□ 1.49
CHRNB1-204ENST00000572857 GLT1D1Q96MS3 346 aa24.35■■□□□ 1.49
CHRNB1-204ENST00000572857 UPF3AQ9H1J1 476 aaKnown RBP24.35■■□□□ 1.49
CHRNB1-204ENST00000572857 PNMA2Q9UL42 364 aa24.35■■□□□ 1.49
CHRNB1-204ENST00000572857 RAD50Q92878 1312 aa24.35■■□□□ 1.49
CHRNB1-204ENST00000572857 ASGR1P07306 291 aa24.34■■□□□ 1.49
CHRNB1-204ENST00000572857 CLTBP09497 229 aa24.34■■□□□ 1.49
CHRNB1-204ENST00000572857 CST5P28325 142 aaPredicted RBP24.34■■□□□ 1.49
CHRNB1-204ENST00000572857 BEX3Q00994 111 aa24.34■■□□□ 1.49
CHRNB1-204ENST00000572857 PTH1RQ03431 593 aa24.34■■□□□ 1.49
CHRNB1-204ENST00000572857 USH1GQ495M9 461 aa24.34■■□□□ 1.49
CHRNB1-204ENST00000572857 SLC30A10Q6XR72 485 aa24.34■■□□□ 1.49
CHRNB1-204ENST00000572857 ADD3Q9UEY8 706 aaKnown RBP24.34■■□□□ 1.49
CHRNB1-204ENST00000572857 SZT2Q5T011 3432 aa24.34■■□□□ 1.49
CHRNB1-204ENST00000572857 PTGS1P23219 599 aa24.33■■□□□ 1.49
CHRNB1-204ENST00000572857 RNF207Q6ZRF8 634 aa24.33■■□□□ 1.49
CHRNB1-204ENST00000572857 WDR19Q8NEZ3 1342 aa24.33■■□□□ 1.48
CHRNB1-204ENST00000572857 DCDC2CA8MYV0 355 aa24.32■■□□□ 1.48
CHRNB1-204ENST00000572857 DYNC1LI2O43237 492 aaPredicted RBP24.32■■□□□ 1.48
CHRNB1-204ENST00000572857 DHX16O60231 1041 aaKnown RBP24.32■■□□□ 1.48
CHRNB1-204ENST00000572857 SMPD1P17405 629 aa24.32■■□□□ 1.48
CHRNB1-204ENST00000572857 ALDH5A1P51649 535 aaPredicted RBP24.32■■□□□ 1.48
CHRNB1-204ENST00000572857 TRDNQ13061 729 aa24.32■■□□□ 1.48
CHRNB1-204ENST00000572857 IFIT1BQ5T764 474 aaKnown RBP24.32■■□□□ 1.48
CHRNB1-204ENST00000572857 TAPT1Q6NXT6 567 aa24.32■■□□□ 1.48
CHRNB1-204ENST00000572857 KIAA1211Q6ZU35 1233 aa24.32■■□□□ 1.48
CHRNB1-204ENST00000572857 ADGRF4Q8IZF3 695 aa24.32■■□□□ 1.48
CHRNB1-204ENST00000572857 AP5M1Q9H0R1 490 aa24.32■■□□□ 1.48
CHRNB1-204ENST00000572857 VAT1LQ9HCJ6 419 aa24.32■■□□□ 1.48
CHRNB1-204ENST00000572857 TMEM39AQ9NV64 488 aa24.32■■□□□ 1.48
CHRNB1-204ENST00000572857 CTAGE5O15320 804 aa24.31■■□□□ 1.48
CHRNB1-204ENST00000572857 PARP1P09874 1014 aaKnown RBP24.31■■□□□ 1.48
CHRNB1-204ENST00000572857 RPS6P62753 249 aaKnown RBP24.31■■□□□ 1.48
CHRNB1-204ENST00000572857 CDC37Q16543 378 aaPredicted RBP24.31■■□□□ 1.48
CHRNB1-204ENST00000572857 ASPRV1Q53RT3 343 aa24.31■■□□□ 1.48
CHRNB1-204ENST00000572857 TMEM63BQ5T3F8 832 aa24.31■■□□□ 1.48
CHRNB1-204ENST00000572857 IQSEC1Q6DN90 963 aa24.31■■□□□ 1.48
CHRNB1-204ENST00000572857 CYB5R4Q7L1T6 521 aa24.31■■□□□ 1.48
CHRNB1-204ENST00000572857 TLK2Q86UE8 772 aa24.31■■□□□ 1.48
CHRNB1-204ENST00000572857 VTA1Q9NP79 307 aa24.31■■□□□ 1.48
CHRNB1-204ENST00000572857 GNEQ9Y223 722 aaKnown RBP24.31■■□□□ 1.48
CHRNB1-204ENST00000572857 U3KPZ7 1027 aaPredicted RBP24.31■■□□□ 1.48
CHRNB1-204ENST00000572857 LAMA3Q16787 3333 aa24.31■■□□□ 1.48
CHRNB1-204ENST00000572857 ELP1O95163 1332 aa24.31■■□□□ 1.48
CHRNB1-204ENST00000572857 MCM3APO60318 1980 aa24.31■■□□□ 1.48
CHRNB1-204ENST00000572857 RAG1P15918 1043 aa24.3■■□□□ 1.48
CHRNB1-204ENST00000572857 ITGB8P26012 769 aa24.3■■□□□ 1.48
CHRNB1-204ENST00000572857 ANKRD33Q7Z3H0 272 aa24.3■■□□□ 1.48
CHRNB1-204ENST00000572857 MORC4Q8TE76 937 aa24.3■■□□□ 1.48
CHRNB1-204ENST00000572857 TOX2Q96NM4 488 aa24.3■■□□□ 1.48
CHRNB1-204ENST00000572857 SGSM2O43147 1006 aa24.29■■□□□ 1.48
CHRNB1-204ENST00000572857 CYP21A2P08686 494 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms