RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 IQSEC1Q6DN90 963 aa11.71□□□□□ -0.53
TRAPPC1-205ENST00000572656 RCSD1Q6JBY9 416 aa11.71□□□□□ -0.53
TRAPPC1-205ENST00000572656 CXCL17Q6UXB2 119 aa11.71□□□□□ -0.53
TRAPPC1-205ENST00000572656 TLK2Q86UE8 772 aa11.71□□□□□ -0.53
TRAPPC1-205ENST00000572656 HERVK_113Q902F9 699 aa11.71□□□□□ -0.53
TRAPPC1-205ENST00000572656 GAS2L1Q99501 681 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC1-205ENST00000572656 AP5M1Q9H0R1 490 aa11.71□□□□□ -0.53
TRAPPC1-205ENST00000572656 CDH23Q9H251 3354 aa11.71□□□□□ -0.54
TRAPPC1-205ENST00000572656 DYNC1LI2O43237 492 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 ZEB2O60315 1214 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 FGBP02675 491 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 SMPD1P17405 629 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 ITGA7Q13683 1181 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 RAB30Q15771 203 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 AKNAD1Q5T1N1 836 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 KCTD1Q719H9 257 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 PI4K2BQ8TCG2 481 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 CHMP4CQ96CF2 233 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 FSD1Q9BTV5 496 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 MTIF3Q9H2K0 278 aaKnown RBP11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 HIPK3Q9H422 1215 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 IL17RBQ9NRM6 502 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 CYP39A1Q9NYL5 469 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 MSRAQ9UJ68 235 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 STX8Q9UNK0 236 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 Q9Y3F1 56 aa11.7□□□□□ -0.54
TRAPPC1-205ENST00000572656 SMCHD1A6NHR9 2005 aa11.69□□□□□ -0.54
TRAPPC1-205ENST00000572656 GRIN2DO15399 1336 aa11.69□□□□□ -0.54
TRAPPC1-205ENST00000572656 ZNFX1Q9P2E3 1918 aaKnown RBP11.69□□□□□ -0.54
TRAPPC1-205ENST00000572656 TSPY2A6NKD2 308 aa11.69□□□□□ -0.54
TRAPPC1-205ENST00000572656 SNAP25P60880 206 aa11.69□□□□□ -0.54
TRAPPC1-205ENST00000572656 MUM1L1Q5H9M0 696 aa11.69□□□□□ -0.54
TRAPPC1-205ENST00000572656 TAPT1Q6NXT6 567 aa11.69□□□□□ -0.54
TRAPPC1-205ENST00000572656 MORC4Q8TE76 937 aa11.69□□□□□ -0.54
TRAPPC1-205ENST00000572656 TRPV6Q9H1D0 765 aa11.69□□□□□ -0.54
TRAPPC1-205ENST00000572656 PRDM12Q9H4Q4 367 aa11.69□□□□□ -0.54
TRAPPC1-205ENST00000572656 PDGFCQ9NRA1 345 aa11.69□□□□□ -0.54
TRAPPC1-205ENST00000572656 CXXC1Q9P0U4 656 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC1-205ENST00000572656 PRR12Q9ULL5 1215 aa11.69□□□□□ -0.54
TRAPPC1-205ENST00000572656 DDX49Q9Y6V7 483 aaKnown RBP11.69□□□□□ -0.54
TRAPPC1-205ENST00000572656 PLXNA1Q9UIW2 1896 aa11.69□□□□□ -0.54
TRAPPC1-205ENST00000572656 UMODL1Q5DID0 1318 aa11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 PRUNE2Q8WUY3 3088 aa11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 NMT2O60551 498 aa11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 ICAM1P05362 532 aa11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 PTGS1P23219 599 aa11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 NOVP48745 357 aa11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 KIAA1211Q6ZU35 1233 aa11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 EEPD1Q7L9B9 569 aa11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 FBXO16Q8IX29 292 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 OTUD7AQ8TE49 926 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 ATXN2LQ8WWM7 1075 aaKnown RBP11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 PPM1EQ8WY54 764 aa11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 NOC4LQ9BVI4 516 aaKnown RBP11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 SLC28A3Q9HAS3 691 aa11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 VTA1Q9NP79 307 aa11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 INCENPQ9NQS7 918 aa11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 CCPG1Q9ULG6 757 aa11.68□□□□□ -0.54
TRAPPC1-205ENST00000572656 TNFRSF10AO00220 468 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 FOXP2O15409 715 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 B4GALT4O60513 344 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 MX1P20591 662 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 CCL23P55773 120 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 PSMC6P62333 389 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 CTDSPL2Q05D32 466 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 ADGRE1Q14246 886 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 DUSP28Q4G0W2 176 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 TMEM63BQ5T3F8 832 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 NSMFQ6X4W1 530 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 RASGRP2Q7LDG7 609 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 OTOP2Q7RTS6 562 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 RPUSD2Q8IZ73 545 aaKnown RBP11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 DCAF4Q8WV16 495 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 WNT8AQ9H1J5 351 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 RANBP17Q9H2T7 1088 aaKnown RBP11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 NKX2-4Q9H2Z4 354 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 ADD3Q9UEY8 706 aaKnown RBP11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 ANAPC4Q9UJX5 808 aa11.67□□□□□ -0.54
TRAPPC1-205ENST00000572656 MYH7P12883 1935 aa11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 LOC102724159A0A0B4J2E5 919 aa11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 ORC4O43929 436 aa11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 RANBP6O60518 1105 aaKnown RBP11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 FGRP09769 529 aa11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 IGFBP4P22692 258 aa11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 BAATQ14032 418 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 PWP2Q15269 919 aaKnown RBP11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 CCDC96Q2M329 555 aa11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 BTNL9Q6UXG8 535 aa11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 ASB2Q96Q27 587 aa11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 PURBQ96QR8 312 aaKnown RBP11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 ALDH8A1Q9H2A2 487 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 POLR3EQ9NVU0 708 aa11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 THEGQ9P2T0 379 aa11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 MTMR7Q9Y216 660 aa11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 YBX2Q9Y2T7 364 aaKnown RBP11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 PCDHB15Q9Y5E8 787 aa11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 SLC4A7Q9Y6M7 1214 aa11.66□□□□□ -0.54
TRAPPC1-205ENST00000572656 CHD9Q3L8U1 2897 aa11.65□□□□□ -0.54
TRAPPC1-205ENST00000572656 SUPT20HL2P0C7V6 817 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms