RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 SMC3Q9UQE7 1217 aa10.9□□□□□ -0.66
NPLOC4-208ENST00000572351 MRPL11Q9Y3B7 192 aaKnown RBP10.9□□□□□ -0.66
NPLOC4-208ENST00000572351 KIF3AQ9Y496 699 aa10.9□□□□□ -0.66
NPLOC4-208ENST00000572351 IVNS1ABPQ9Y6Y0 642 aa10.9□□□□□ -0.66
NPLOC4-208ENST00000572351 PHIPQ8WWQ0 1821 aa10.9□□□□□ -0.66
NPLOC4-208ENST00000572351 LOC285556D6RIA3 1793 aa10.9□□□□□ -0.67
NPLOC4-208ENST00000572351 THSD7BQ9C0I4 1608 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 hCG_1984214I3L0E3 225 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 GPR25O00155 361 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 TNPO2O14787 897 aaKnown RBP10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 PPP1R11O60927 126 aaPredicted RBP10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 DTNBO60941 627 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 CTDNEP1O95476 244 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 XBP1P17861 261 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 MAPK4P31152 587 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 NAPAP54920 295 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 FCGRTP55899 365 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 TRIM29Q14134 588 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 POTEEQ6S8J3 1075 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 MCF2L2Q86YR7 1114 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 ZNF713Q8N859 430 aaPredicted RBP10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 JMYQ8N9B5 988 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 SHCBP1Q8NEM2 672 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 CHST13Q8NET6 341 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 GPKOWQ92917 476 aaPredicted RBP eCLIP10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 COA7Q96BR5 231 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 PORCNQ9H237 461 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 ACAD9Q9H845 621 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 EFCC1Q9HA90 598 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 FBXO40Q9UH90 709 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 RIPK3Q9Y572 518 aa10.89□□□□□ -0.67
NPLOC4-208ENST00000572351 FKTNO75072 461 aa10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 HSPA1AP0DMV8 641 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 HSPA1BP0DMV9 641 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 FOSBP53539 338 aa10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 CUL4AQ13619 759 aa10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 KCTD2Q14681 263 aa10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 ARHGEF6Q15052 776 aa10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 WWC2Q6AWC2 1192 aa10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 PPP1R18Q6NYC8 613 aa10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 NSMFQ6X4W1 530 aa10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 ANKRD35Q8N283 1001 aa10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 CCDC148Q8NFR7 591 aa10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 ERO1AQ96HE7 468 aa10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 MMP19Q99542 508 aa10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 ALG1Q9BT22 464 aa10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 TSHZ2Q9NRE2 1034 aa10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 BARHL2Q9NY43 387 aa10.88□□□□□ -0.67
NPLOC4-208ENST00000572351 STXBP3O00186 592 aa10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 NFIBO00712 420 aa10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 FCER1AP12319 257 aa10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 GJB2P29033 226 aa10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 PSMC4P43686 418 aa10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 NLRP5P59047 1200 aa10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 LACTBP83111 547 aaPredicted RBP10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 PKN1Q16512 942 aa10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 GPR142Q7Z601 462 aa10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 PLEKHH3Q7Z736 793 aa10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 SPRYD3Q8NCJ5 442 aa10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 SMARCC2Q8TAQ2 1214 aa10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 ZNF296Q8WUU4 475 aaPredicted RBP10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 CUL5Q93034 780 aa10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 INTS4Q96HW7 963 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 C6orf50Q9HD87 102 aa10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 VPS54Q9P1Q0 977 aa10.87□□□□□ -0.67
NPLOC4-208ENST00000572351 SMCO2A6NFE2 343 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 GCOM1H8Y6P7 765 aaPredicted RBP10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 CFBP00751 764 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 POLR2MP0CAP2 368 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 FDPSP14324 419 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 CALML3P27482 149 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 GNA11P29992 359 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 CTCFP49711 727 aaPredicted RBP10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 ADCY7P51828 1080 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 MRPL12P52815 198 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 NOM1Q5C9Z4 860 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 MUM1L1Q5H9M0 696 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 RNF207Q6ZRF8 634 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 CD99L2Q8TCZ2 262 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 C8orf76Q96K31 380 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 AIFM3Q96NN9 605 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 GLT8D2Q9H1C3 349 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 PSTPIP2Q9H939 334 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 BRMS1Q9HCU9 246 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 SH3GLB2Q9NR46 395 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 RBM19Q9Y4C8 960 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 MYH4Q9Y623 1939 aa10.86□□□□□ -0.67
NPLOC4-208ENST00000572351 PFASO15067 1338 aa10.85□□□□□ -0.67
NPLOC4-208ENST00000572351 H3BQV1 296 aa10.85□□□□□ -0.67
NPLOC4-208ENST00000572351 FOXN1O15353 648 aa10.85□□□□□ -0.67
NPLOC4-208ENST00000572351 STRNO43815 780 aa10.85□□□□□ -0.67
NPLOC4-208ENST00000572351 PTPREP23469 700 aa10.85□□□□□ -0.67
NPLOC4-208ENST00000572351 HOXD10P28358 340 aa10.85□□□□□ -0.67
NPLOC4-208ENST00000572351 SAFBQ15424 915 aaKnown RBP eCLIP10.85□□□□□ -0.67
NPLOC4-208ENST00000572351 IFFO2Q5TF58 517 aa10.85□□□□□ -0.67
NPLOC4-208ENST00000572351 DPP9Q86TI2 863 aa10.85□□□□□ -0.67
NPLOC4-208ENST00000572351 BICD2Q8TD16 824 aa10.85□□□□□ -0.67
NPLOC4-208ENST00000572351 SOCS4Q8WXH5 440 aa10.85□□□□□ -0.67
NPLOC4-208ENST00000572351 CLEC4DQ8WXI8 215 aa10.85□□□□□ -0.67
NPLOC4-208ENST00000572351 ARHGAP39Q9C0H5 1083 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms