RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 SLFN13Q68D06 897 aa23.67■■□□□ 1.38
CCDC40-206ENST00000572083 GMCL1P1Q8NEA9 526 aa23.67■■□□□ 1.38
CCDC40-206ENST00000572083 TRPV6Q9H1D0 765 aa23.67■■□□□ 1.38
CCDC40-206ENST00000572083 WNT8AQ9H1J5 351 aa23.67■■□□□ 1.38
CCDC40-206ENST00000572083 RNF146Q9NTX7 359 aa23.67■■□□□ 1.38
CCDC40-206ENST00000572083 GPAA1O43292 621 aa23.66■■□□□ 1.38
CCDC40-206ENST00000572083 CABYRO75952 493 aa23.66■■□□□ 1.38
CCDC40-206ENST00000572083 PSMC6P62333 389 aa23.66■■□□□ 1.38
CCDC40-206ENST00000572083 IKQ13123 557 aaPredicted RBP23.66■■□□□ 1.38
CCDC40-206ENST00000572083 PPP2R2DQ66LE6 453 aa23.66■■□□□ 1.38
CCDC40-206ENST00000572083 APPBP2Q92624 585 aa23.66■■□□□ 1.38
CCDC40-206ENST00000572083 AGBL1Q96MI9 1066 aa23.66■■□□□ 1.38
CCDC40-206ENST00000572083 NOC4LQ9BVI4 516 aaKnown RBP23.66■■□□□ 1.38
CCDC40-206ENST00000572083 AP5M1Q9H0R1 490 aa23.66■■□□□ 1.38
CCDC40-206ENST00000572083 ZNF536O15090 1300 aa23.65■■□□□ 1.38
CCDC40-206ENST00000572083 TRANK1O15050 2925 aa23.65■■□□□ 1.38
CCDC40-206ENST00000572083 MYOGP15173 224 aa23.65■■□□□ 1.38
CCDC40-206ENST00000572083 SMPD1P17405 629 aa23.65■■□□□ 1.38
CCDC40-206ENST00000572083 STAT2P52630 851 aa23.65■■□□□ 1.38
CCDC40-206ENST00000572083 EEPD1Q7L9B9 569 aa23.65■■□□□ 1.38
CCDC40-206ENST00000572083 KBTBD3Q8NAB2 608 aa23.65■■□□□ 1.38
CCDC40-206ENST00000572083 NECAB3Q96P71 396 aaPredicted RBP23.65■■□□□ 1.38
CCDC40-206ENST00000572083 ZNF287Q9HBT7 754 aa23.65■■□□□ 1.38
CCDC40-206ENST00000572083 PLIN4Q96Q06 1357 aa23.65■■□□□ 1.38
CCDC40-206ENST00000572083 ASB14A6NK59 587 aa23.64■■□□□ 1.37
CCDC40-206ENST00000572083 ZBBXA8MT70 800 aa23.64■■□□□ 1.37
CCDC40-206ENST00000572083 M0R2C6 588 aa23.64■■□□□ 1.37
CCDC40-206ENST00000572083 DYNC1LI2O43237 492 aaPredicted RBP23.64■■□□□ 1.37
CCDC40-206ENST00000572083 APPP05067 770 aa23.64■■□□□ 1.37
CCDC40-206ENST00000572083 TMEM63BQ5T3F8 832 aa23.64■■□□□ 1.37
CCDC40-206ENST00000572083 TSHZ3Q63HK5 1081 aa23.64■■□□□ 1.37
CCDC40-206ENST00000572083 FBXO16Q8IX29 292 aaPredicted RBP23.64■■□□□ 1.37
CCDC40-206ENST00000572083 SCLYQ96I15 445 aa23.64■■□□□ 1.37
CCDC40-206ENST00000572083 PDGFCQ9NRA1 345 aa23.64■■□□□ 1.37
CCDC40-206ENST00000572083 ECHDC1Q9NTX5 307 aa23.64■■□□□ 1.37
CCDC40-206ENST00000572083 SYNPO2Q9UMS6 1093 aa23.64■■□□□ 1.37
CCDC40-206ENST00000572083 SLC4A7Q9Y6M7 1214 aa23.64■■□□□ 1.37
CCDC40-206ENST00000572083 NCOR1O75376 2440 aa23.64■■□□□ 1.37
CCDC40-206ENST00000572083 TSPY3P0CV98 308 aa23.63■■□□□ 1.37
CCDC40-206ENST00000572083 TSPY8P0CW00 308 aa23.63■■□□□ 1.37
CCDC40-206ENST00000572083 FDX1P10109 184 aa23.63■■□□□ 1.37
CCDC40-206ENST00000572083 ALAS1P13196 640 aa23.63■■□□□ 1.37
CCDC40-206ENST00000572083 TRERF1Q96PN7 1200 aa23.63■■□□□ 1.37
CCDC40-206ENST00000572083 RNF113AO15541 343 aaKnown RBP23.62■■□□□ 1.37
CCDC40-206ENST00000572083 ZEB2O60315 1214 aa23.62■■□□□ 1.37
CCDC40-206ENST00000572083 SNAP25P60880 206 aa23.62■■□□□ 1.37
CCDC40-206ENST00000572083 TFF2Q03403 129 aa23.62■■□□□ 1.37
CCDC40-206ENST00000572083 VWCEQ96DN2 955 aa23.62■■□□□ 1.37
CCDC40-206ENST00000572083 TSPYL2Q9H2G4 693 aaPredicted RBP23.62■■□□□ 1.37
CCDC40-206ENST00000572083 LCTP09848 1927 aa23.62■■□□□ 1.37
CCDC40-206ENST00000572083 TCF20Q9UGU0 1960 aaKnown RBP23.61■■□□□ 1.37
CCDC40-206ENST00000572083 GNAT2P19087 354 aa23.61■■□□□ 1.37
CCDC40-206ENST00000572083 SLC1A4P43007 532 aa23.61■■□□□ 1.37
CCDC40-206ENST00000572083 MUM1L1Q5H9M0 696 aa23.61■■□□□ 1.37
CCDC40-206ENST00000572083 TAPT1Q6NXT6 567 aa23.61■■□□□ 1.37
CCDC40-206ENST00000572083 FAM160B2Q86V87 743 aa23.61■■□□□ 1.37
CCDC40-206ENST00000572083 NEDD1Q8NHV4 660 aa23.61■■□□□ 1.37
CCDC40-206ENST00000572083 PCDHA11Q9Y5I1 949 aa23.61■■□□□ 1.37
CCDC40-206ENST00000572083 ATP2A2P16615 1042 aaKnown RBP23.6■■□□□ 1.37
CCDC40-206ENST00000572083 KCTD1Q719H9 257 aa23.6■■□□□ 1.37
CCDC40-206ENST00000572083 RASGRP2Q7LDG7 609 aa23.6■■□□□ 1.37
CCDC40-206ENST00000572083 RPUSD2Q8IZ73 545 aaKnown RBP23.6■■□□□ 1.37
CCDC40-206ENST00000572083 IFNL3Q8IZI9 196 aa23.6■■□□□ 1.37
CCDC40-206ENST00000572083 CHURC1Q8WUH1 139 aa23.6■■□□□ 1.37
CCDC40-206ENST00000572083 STAG1Q8WVM7 1258 aa23.6■■□□□ 1.37
CCDC40-206ENST00000572083 MCCP23508 829 aa23.59■■□□□ 1.37
CCDC40-206ENST00000572083 TFAP4Q01664 338 aa23.59■■□□□ 1.37
CCDC40-206ENST00000572083 TTLL4Q14679 1199 aa23.59■■□□□ 1.37
CCDC40-206ENST00000572083 SKIV2LQ15477 1246 aaKnown RBP23.59■■□□□ 1.37
CCDC40-206ENST00000572083 TKFCQ3LXA3 575 aa23.59■■□□□ 1.37
CCDC40-206ENST00000572083 GMCL1Q96IK5 515 aa23.59■■□□□ 1.37
CCDC40-206ENST00000572083 PURBQ96QR8 312 aaKnown RBP23.59■■□□□ 1.37
CCDC40-206ENST00000572083 SEZ6LQ9BYH1 1024 aa23.59■■□□□ 1.37
CCDC40-206ENST00000572083 ALDH8A1Q9H2A2 487 aaPredicted RBP23.59■■□□□ 1.37
CCDC40-206ENST00000572083 TRMT13Q9NUP7 481 aaKnown RBP23.59■■□□□ 1.37
CCDC40-206ENST00000572083 CYP39A1Q9NYL5 469 aa23.59■■□□□ 1.37
CCDC40-206ENST00000572083 ZFYP08048 801 aaPredicted RBP23.58■■□□□ 1.37
CCDC40-206ENST00000572083 CYP2C9P11712 490 aa23.58■■□□□ 1.37
CCDC40-206ENST00000572083 PLA2G5P39877 138 aa23.58■■□□□ 1.37
CCDC40-206ENST00000572083 KCNQ1P51787 676 aa23.58■■□□□ 1.37
CCDC40-206ENST00000572083 PDE4BQ07343 736 aa23.58■■□□□ 1.37
CCDC40-206ENST00000572083 IQSEC1Q6DN90 963 aa23.58■■□□□ 1.37
CCDC40-206ENST00000572083 NSMFQ6X4W1 530 aa23.58■■□□□ 1.37
CCDC40-206ENST00000572083 PATL2C9JE40 543 aaKnown RBP23.57■■□□□ 1.36
CCDC40-206ENST00000572083 RFXAPO00287 272 aa23.57■■□□□ 1.36
CCDC40-206ENST00000572083 CA3P07451 260 aa23.57■■□□□ 1.36
CCDC40-206ENST00000572083 BMP1P13497 986 aa23.57■■□□□ 1.36
CCDC40-206ENST00000572083 KIAA1211Q6ZU35 1233 aa23.57■■□□□ 1.36
CCDC40-206ENST00000572083 DEFB128Q7Z7B8 93 aa23.57■■□□□ 1.36
CCDC40-206ENST00000572083 GPATCH3Q96I76 525 aa23.57■■□□□ 1.36
CCDC40-206ENST00000572083 SEC62Q99442 399 aaKnown RBP23.57■■□□□ 1.36
CCDC40-206ENST00000572083 CHMP4BQ9H444 224 aaKnown RBP23.57■■□□□ 1.36
CCDC40-206ENST00000572083 CERS4Q9HA82 394 aa23.57■■□□□ 1.36
CCDC40-206ENST00000572083 VTA1Q9NP79 307 aa23.57■■□□□ 1.36
CCDC40-206ENST00000572083 STX8Q9UNK0 236 aa23.57■■□□□ 1.36
CCDC40-206ENST00000572083 Q9Y3F1 56 aa23.57■■□□□ 1.36
CCDC40-206ENST00000572083 SCN5AQ14524 2016 aa23.57■■□□□ 1.36
CCDC40-206ENST00000572083 NACAP1Q9BZK3 213 aa23.56■■□□□ 1.36
CCDC40-206ENST00000572083 CCPG1Q9ULG6 757 aa23.56■■□□□ 1.36
CCDC40-206ENST00000572083 PRR12Q9ULL5 1215 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms