RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 OR52Z1P0C646 297 aa22.05■■□□□ 1.12
RPAIN-210ENST00000571613 EPS15P42566 896 aa22.05■■□□□ 1.12
RPAIN-210ENST00000571613 PPP4R3AQ6IN85 833 aa22.05■■□□□ 1.12
RPAIN-210ENST00000571613 DPY19L2Q6NUT2 758 aa22.05■■□□□ 1.12
RPAIN-210ENST00000571613 CEP57L1Q8IYX8 460 aa22.05■■□□□ 1.12
RPAIN-210ENST00000571613 TUBE1Q9UJT0 475 aa22.05■■□□□ 1.12
RPAIN-210ENST00000571613 SCYL3Q8IZE3 742 aa22.04■■□□□ 1.12
RPAIN-210ENST00000571613 IQUBQ8NA54 791 aa22.04■■□□□ 1.12
RPAIN-210ENST00000571613 RANBP17Q9H2T7 1088 aaKnown RBP22.04■■□□□ 1.12
RPAIN-210ENST00000571613 PICK1Q9NRD5 415 aa22.04■■□□□ 1.12
RPAIN-210ENST00000571613 GOLGB1Q14789 3259 aaKnown RBP22.04■■□□□ 1.12
RPAIN-210ENST00000571613 DDNO94850 711 aaPredicted RBP22.04■■□□□ 1.12
RPAIN-210ENST00000571613 SLFN14P0C7P3 912 aa22.04■■□□□ 1.12
RPAIN-210ENST00000571613 WDR18Q9BV38 432 aa22.04■■□□□ 1.12
RPAIN-210ENST00000571613 TMEM260Q9NX78 707 aa22.04■■□□□ 1.12
RPAIN-210ENST00000571613 PNMA2Q9UL42 364 aa22.04■■□□□ 1.12
RPAIN-210ENST00000571613 SCAF8Q9UPN6 1271 aaKnown RBP22.04■■□□□ 1.12
RPAIN-210ENST00000571613 YBX3P16989 372 aaKnown RBP eCLIP22.03■■□□□ 1.121e-7■□□□□ 10.3
RPAIN-210ENST00000571613 USP11P51784 963 aa22.03■■□□□ 1.12
RPAIN-210ENST00000571613 NLRP12P59046 1061 aa22.03■■□□□ 1.12
RPAIN-210ENST00000571613 KIAA1755Q5JYT7 1200 aa22.03■■□□□ 1.12
RPAIN-210ENST00000571613 C9orf131Q5VYM1 1079 aa22.03■■□□□ 1.12
RPAIN-210ENST00000571613 EPSTI1Q96J88 318 aa22.03■■□□□ 1.12
RPAIN-210ENST00000571613 DNAJC25Q9H1X3 360 aa22.03■■□□□ 1.12
RPAIN-210ENST00000571613 CBX8Q9HC52 389 aa22.03■■□□□ 1.12
RPAIN-210ENST00000571613 SERTAD1Q9UHV2 236 aa22.03■■□□□ 1.12
RPAIN-210ENST00000571613 ZC3H4Q9UPT8 1303 aaKnown RBP22.03■■□□□ 1.12
RPAIN-210ENST00000571613 ACTN4O43707 911 aaKnown RBP22.02■■□□□ 1.12
RPAIN-210ENST00000571613 HIRAP54198 1017 aaPredicted RBP22.02■■□□□ 1.12
RPAIN-210ENST00000571613 POSTNQ15063 836 aa22.02■■□□□ 1.12
RPAIN-210ENST00000571613 RAB34Q9BZG1 259 aa22.02■■□□□ 1.12
RPAIN-210ENST00000571613 SMC2O95347 1197 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 MDM2Q00987 491 aaPredicted RBP22.01■■□□□ 1.11
RPAIN-210ENST00000571613 ZYXQ15942 572 aaKnown RBP22.01■■□□□ 1.11
RPAIN-210ENST00000571613 UBE2SQ16763 222 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 MOXD1Q6UVY6 613 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 USP49Q70CQ1 688 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 TRIML1Q8N9V2 468 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 PDLIM2Q96JY6 352 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 BPIFA3Q9BQP9 254 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 CCSER1Q9C0I3 900 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 TMEM60Q9H2L4 133 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 CCDC39Q9UFE4 941 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 MRPL11Q9Y3B7 192 aaKnown RBP22.01■■□□□ 1.11
RPAIN-210ENST00000571613 ATAD5Q96QE3 1844 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 GOLGA6L19H0YKK7 550 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 PIK3CDO00329 1044 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 FDX1P10109 184 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 UBA7P41226 1012 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 IL17AQ16552 155 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 PDILTQ8N807 584 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 PRPF38AQ8NAV1 312 aaKnown RBP22.01■■□□□ 1.11
RPAIN-210ENST00000571613 KIFC2Q96AC6 838 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 DCPSQ96C86 337 aaKnown RBP22.01■■□□□ 1.11
RPAIN-210ENST00000571613 WRNIP1Q96S55 665 aa22.01■■□□□ 1.11
RPAIN-210ENST00000571613 SPDYE3A6NKU9 549 aa22■■□□□ 1.11
RPAIN-210ENST00000571613 INPP5BP32019 993 aa22■■□□□ 1.11
RPAIN-210ENST00000571613 CALCRLQ16602 461 aa22■■□□□ 1.11
RPAIN-210ENST00000571613 TMEM266Q2M3C6 531 aa22■■□□□ 1.11
RPAIN-210ENST00000571613 USH1GQ495M9 461 aa22■■□□□ 1.11
RPAIN-210ENST00000571613 NOL9Q5SY16 702 aaKnown RBP22■■□□□ 1.11
RPAIN-210ENST00000571613 NT5DC1Q5TFE4 455 aa22■■□□□ 1.11
RPAIN-210ENST00000571613 DHX58Q96C10 678 aa22■■□□□ 1.11
RPAIN-210ENST00000571613 TRIM44Q96DX7 344 aaPredicted RBP22■■□□□ 1.11
RPAIN-210ENST00000571613 GLIS2Q9BZE0 524 aaPredicted RBP22■■□□□ 1.11
RPAIN-210ENST00000571613 ABCB11O95342 1321 aa22■■□□□ 1.11
RPAIN-210ENST00000571613 BECN2A8MW95 431 aa21.99■■□□□ 1.11
RPAIN-210ENST00000571613 MEIS2O14770 477 aa21.99■■□□□ 1.11
RPAIN-210ENST00000571613 PNOCQ13519 176 aa21.99■■□□□ 1.11
RPAIN-210ENST00000571613 SMARCE1Q969G3 411 aa21.99■■□□□ 1.11
RPAIN-210ENST00000571613 KLRG1Q96E93 195 aa21.99■■□□□ 1.11
RPAIN-210ENST00000571613 MTMR9Q96QG7 549 aa21.99■■□□□ 1.11
RPAIN-210ENST00000571613 ANO3Q9BYT9 981 aa21.99■■□□□ 1.11
RPAIN-210ENST00000571613 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.99■■□□□ 1.11
RPAIN-210ENST00000571613 USP17L15C9J2P7 530 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 C19orf81C9J6K1 198 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 USP17L13C9JLJ4 530 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 USP17L11C9JVI0 530 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 USP17L18D6R9N7 530 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 USP17L22D6RA61 530 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 USP17L17D6RBQ6 530 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 USP17L19D6RCP7 530 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 USP17L20D6RJB6 530 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 USP17L24Q0WX57 530 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 USP17L6PQ6QN14 398 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 SULF1Q8IWU6 871 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 ZNF280CQ8ND82 737 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 L3MBTL3Q96JM7 780 aaPredicted RBP21.98■■□□□ 1.11
RPAIN-210ENST00000571613 SLF1Q9BQI6 1058 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 CUEDC2Q9H467 287 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 DACH1Q9UI36 760 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 PCDHA5Q9Y5H7 936 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 CYP3A7-CYP3A51PA0A087WV96 503 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 GRIN3BO60391 1043 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 CYP3A7P24462 503 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 FXR2P51116 673 aaKnown RBP eCLIP21.98■■□□□ 1.11
RPAIN-210ENST00000571613 BACE1P56817 501 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 PDIA5Q14554 519 aa21.98■■□□□ 1.11
RPAIN-210ENST00000571613 USP50Q70EL3 339 aaPredicted RBP21.98■■□□□ 1.11
RPAIN-210ENST00000571613 SH3RF1Q7Z6J0 888 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms