RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 PCMTD1Q96MG8 357 aaPredicted RBP17.16■□□□□ 0.34
SMG6-207ENST00000570756 HINFPQ9BQA5 517 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 TUBGCP2Q9BSJ2 902 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 SH2D4AQ9H788 454 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 RBM28Q9NW13 759 aaKnown RBP17.16■□□□□ 0.34
SMG6-207ENST00000570756 LRWD1Q9UFC0 647 aa17.16■□□□□ 0.34
SMG6-207ENST00000570756 A0A1W2PQJ5 194 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 ANKRD18BA2A2Z9 1011 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 PDE8BO95263 885 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 ITGA6P23229 1130 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 LONP1P36776 959 aaKnown RBP17.15■□□□□ 0.34
SMG6-207ENST00000570756 MATR3P43243 847 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMG6-207ENST00000570756 SLC7A5Q01650 507 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 TBC1D8BQ0IIM8 1120 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 NEDD9Q14511 834 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 FIGNQ5HY92 759 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 CFAP58Q5T655 872 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 FAM114A1Q8IWE2 563 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 CCDC155Q8N6L0 562 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 IFIH1Q9BYX4 1025 aaKnown RBP17.15■□□□□ 0.34
SMG6-207ENST00000570756 COL18A1P39060 1754 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 TNKSO95271 1327 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 SRRM3A6NNA2 597 aaPredicted RBP17.15■□□□□ 0.34
SMG6-207ENST00000570756 CLGNO14967 610 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 PRDM1O75626 825 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 MYL1P05976 194 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 ATP1A2P50993 1020 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 DRP2Q13474 957 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 ARL6IP4Q66PJ3 421 aaKnown RBP17.15■□□□□ 0.34
SMG6-207ENST00000570756 VGLL2Q8N8G2 317 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 ESR2Q92731 530 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 SLC4A4Q9Y6R1 1079 aa17.15■□□□□ 0.34
SMG6-207ENST00000570756 V9GY48 417 aaPredicted RBP17.15■□□□□ 0.34
SMG6-207ENST00000570756 COL22A1Q8NFW1 1626 aaPredicted RBP17.14■□□□□ 0.34
SMG6-207ENST00000570756 PNPLA7Q6ZV29 1317 aa17.14■□□□□ 0.33
SMG6-207ENST00000570756 PPP1R37O75864 691 aa17.14■□□□□ 0.33
SMG6-207ENST00000570756 SMTNP53814 917 aa17.14■□□□□ 0.33
SMG6-207ENST00000570756 PPARAQ07869 468 aa17.14■□□□□ 0.33
SMG6-207ENST00000570756 VCPKMTQ9H867 229 aa17.14■□□□□ 0.33
SMG6-207ENST00000570756 BTG4Q9NY30 223 aa17.14■□□□□ 0.33
SMG6-207ENST00000570756 CAPN6Q9Y6Q1 641 aa17.14■□□□□ 0.33
SMG6-207ENST00000570756 C21orf2O43822 256 aa17.13■□□□□ 0.33
SMG6-207ENST00000570756 PAK2Q13177 524 aa17.13■□□□□ 0.33
SMG6-207ENST00000570756 SEC23AQ15436 765 aa17.13■□□□□ 0.33
SMG6-207ENST00000570756 CATIPQ7Z7H3 387 aa17.13■□□□□ 0.33
SMG6-207ENST00000570756 SPATA5Q8NB90 893 aa17.13■□□□□ 0.33
SMG6-207ENST00000570756 C1orf131Q8NDD1 294 aaKnown RBP17.13■□□□□ 0.33
SMG6-207ENST00000570756 ZNF473Q8WTR7 871 aaKnown RBP17.13■□□□□ 0.33
SMG6-207ENST00000570756 SUFUQ9UMX1 484 aa17.13■□□□□ 0.33
SMG6-207ENST00000570756 UBR2Q8IWV8 1755 aa17.13■□□□□ 0.33
SMG6-207ENST00000570756 NR1D1P20393 614 aa17.13■□□□□ 0.33
SMG6-207ENST00000570756 CDR1P51861 262 aa17.13■□□□□ 0.33
SMG6-207ENST00000570756 PMS1P54277 932 aaKnown RBP17.13■□□□□ 0.33
SMG6-207ENST00000570756 ACTN3Q08043 901 aaPredicted RBP17.13■□□□□ 0.33
SMG6-207ENST00000570756 FUT2Q10981 343 aa17.13■□□□□ 0.33
SMG6-207ENST00000570756 RNF187Q5TA31 235 aaPredicted RBP17.13■□□□□ 0.33
SMG6-207ENST00000570756 KCTD16Q68DU8 428 aa17.13■□□□□ 0.33
SMG6-207ENST00000570756 CD302Q8IX05 232 aa17.13■□□□□ 0.33
SMG6-207ENST00000570756 SH2D3CQ8N5H7 860 aa17.13■□□□□ 0.33
SMG6-207ENST00000570756 CSGALNACT2Q8N6G5 542 aa17.13■□□□□ 0.33
SMG6-207ENST00000570756 DHTKD1Q96HY7 919 aaPredicted RBP17.13■□□□□ 0.33
SMG6-207ENST00000570756 RNPC3Q96LT9 517 aaKnown RBP17.13■□□□□ 0.33
SMG6-207ENST00000570756 PCDHA13Q9Y5I0 950 aa17.13■□□□□ 0.33
SMG6-207ENST00000570756 BICDL2A1A5D9 508 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 KRT14P02533 472 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 CALM1P0DP23 149 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 CALM2P0DP24 149 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 CALM3P0DP25 149 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 PTGISQ16647 500 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 FKBP15Q5T1M5 1219 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 IQCKQ8N0W5 287 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 C8orf37Q96NL8 207 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 KLC4Q9NSK0 619 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 RNF14Q9UBS8 474 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 TSKSQ9UJT2 592 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 PRKAB2O43741 272 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 MCM7P33993 719 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 PUM3Q15397 648 aaKnown RBP17.12■□□□□ 0.33
SMG6-207ENST00000570756 CCDC40Q4G0X9 1142 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 TTI2Q6NXR4 508 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 NFRKBQ6P4R8 1299 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 MREGQ8N565 214 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 ZKSCAN4Q969J2 545 aaPredicted RBP17.12■□□□□ 0.33
SMG6-207ENST00000570756 CCDC43Q96MW1 224 aaKnown RBP17.12■□□□□ 0.33
SMG6-207ENST00000570756 GREM2Q9H772 168 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 DISC1Q9NRI5 854 aa17.12■□□□□ 0.33
SMG6-207ENST00000570756 hCG_1642624A0A1W2PR95 340 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 HMGB1P1B2RPK0 211 aaPredicted RBP17.11■□□□□ 0.33
SMG6-207ENST00000570756 MOCS3O95396 460 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 HNRNPH3P31942 346 aaKnown RBP17.11■□□□□ 0.33
SMG6-207ENST00000570756 GUCY1A3Q02108 690 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 NPY5RQ15761 445 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 KIF6Q6ZMV9 814 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 NLRP14Q86W24 1093 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 GIMAP8Q8ND71 665 aaPredicted RBP17.11■□□□□ 0.33
SMG6-207ENST00000570756 SMCR8Q8TEV9 937 aaPredicted RBP17.11■□□□□ 0.33
SMG6-207ENST00000570756 LPIN2Q92539 896 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 ERGIC2Q96RQ1 377 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 DOCK2Q92608 1830 aa17.11■□□□□ 0.33
SMG6-207ENST00000570756 GOLGA6L7A0A1B0GV03 622 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms