RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 FAM184BQ9ULE4 1060 aa17.72■□□□□ 0.43
RAB40B-203ENST00000570676 ATP11BQ9Y2G3 1177 aa17.72■□□□□ 0.43
RAB40B-203ENST00000570676 A0A1W2PQ45 241 aaPredicted RBP17.71■□□□□ 0.43
RAB40B-203ENST00000570676 A0A1W2PQY0 241 aa17.71■□□□□ 0.43
RAB40B-203ENST00000570676 MYADML2A6NDP7 307 aa17.71■□□□□ 0.43
RAB40B-203ENST00000570676 B4E1Z4 1266 aa17.71■□□□□ 0.43
RAB40B-203ENST00000570676 SEC24BO95487 1268 aa17.71■□□□□ 0.43
RAB40B-203ENST00000570676 IMMTQ16891 758 aaKnown RBP17.71■□□□□ 0.43
RAB40B-203ENST00000570676 DGKHQ86XP1 1220 aa17.71■□□□□ 0.43
RAB40B-203ENST00000570676 KLHDC9Q8NEP7 349 aa17.71■□□□□ 0.43
RAB40B-203ENST00000570676 ANO2Q9NQ90 1003 aa17.71■□□□□ 0.43
RAB40B-203ENST00000570676 DUSP11O75319 330 aaKnown RBP17.7■□□□□ 0.42
RAB40B-203ENST00000570676 REC8O95072 547 aa17.7■□□□□ 0.42
RAB40B-203ENST00000570676 CST5P28325 142 aaPredicted RBP17.7■□□□□ 0.42
RAB40B-203ENST00000570676 IRX5P78411 483 aaPredicted RBP17.7■□□□□ 0.42
RAB40B-203ENST00000570676 MDM2Q00987 491 aaPredicted RBP17.7■□□□□ 0.42
RAB40B-203ENST00000570676 CCDC144BQ3MJ40 725 aa17.7■□□□□ 0.42
RAB40B-203ENST00000570676 CCSAPQ6IQ19 270 aaPredicted RBP17.7■□□□□ 0.42
RAB40B-203ENST00000570676 TDHQ8IZJ6 230 aa17.7■□□□□ 0.42
RAB40B-203ENST00000570676 UPF3AQ9H1J1 476 aaKnown RBP17.7■□□□□ 0.42
RAB40B-203ENST00000570676 PDLIM7Q9NR12 457 aa17.7■□□□□ 0.42
RAB40B-203ENST00000570676 DDX49Q9Y6V7 483 aaKnown RBP17.7■□□□□ 0.42
RAB40B-203ENST00000570676 WDR19Q8NEZ3 1342 aa17.7■□□□□ 0.42
RAB40B-203ENST00000570676 NFIBO00712 420 aa17.69■□□□□ 0.42
RAB40B-203ENST00000570676 NSMFQ6X4W1 530 aa17.69■□□□□ 0.42
RAB40B-203ENST00000570676 IQCA1Q86XH1 822 aa17.69■□□□□ 0.42
RAB40B-203ENST00000570676 ENAHQ8N8S7 591 aaPredicted RBP17.69■□□□□ 0.42
RAB40B-203ENST00000570676 PNMA1Q8ND90 353 aa17.69■□□□□ 0.42
RAB40B-203ENST00000570676 ANKS1AQ92625 1134 aa17.69■□□□□ 0.42
RAB40B-203ENST00000570676 LRCH3Q96II8 777 aa17.69■□□□□ 0.42
RAB40B-203ENST00000570676 ZSCAN10Q96SZ4 725 aaPredicted RBP17.69■□□□□ 0.42
RAB40B-203ENST00000570676 TSEN34Q9BSV6 310 aaKnown RBP17.69■□□□□ 0.42
RAB40B-203ENST00000570676 UBE2OQ9C0C9 1292 aaKnown RBP17.69■□□□□ 0.42
RAB40B-203ENST00000570676 CTNNA3Q9UI47 895 aa17.69■□□□□ 0.42
RAB40B-203ENST00000570676 TNKSO95271 1327 aa17.69■□□□□ 0.42
RAB40B-203ENST00000570676 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.68■□□□□ 0.42
RAB40B-203ENST00000570676 ASB14A6NK59 587 aa17.68■□□□□ 0.42
RAB40B-203ENST00000570676 CTAGE5O15320 804 aa17.68■□□□□ 0.42
RAB40B-203ENST00000570676 GOLGA8HP0CJ92 632 aa17.68■□□□□ 0.42
RAB40B-203ENST00000570676 ACLYP53396 1101 aa17.68■□□□□ 0.42
RAB40B-203ENST00000570676 CCDC178Q5BJE1 867 aa17.68■□□□□ 0.42
RAB40B-203ENST00000570676 GPATCH4Q5T3I0 446 aaKnown RBP17.68■□□□□ 0.42
RAB40B-203ENST00000570676 MORC4Q8TE76 937 aa17.68■□□□□ 0.42
RAB40B-203ENST00000570676 CLEC4DQ8WXI8 215 aa17.68■□□□□ 0.42
RAB40B-203ENST00000570676 PURBQ96QR8 312 aaKnown RBP17.68■□□□□ 0.42
RAB40B-203ENST00000570676 ZSWIM5Q9P217 1185 aa17.68■□□□□ 0.42
RAB40B-203ENST00000570676 MOXD2PA6NHM9 499 aa17.67■□□□□ 0.42
RAB40B-203ENST00000570676 GJA9P57773 515 aa17.67■□□□□ 0.42
RAB40B-203ENST00000570676 PTH1RQ03431 593 aa17.67■□□□□ 0.42
RAB40B-203ENST00000570676 LRIT3Q3SXY7 679 aa17.67■□□□□ 0.42
RAB40B-203ENST00000570676 SLC30A10Q6XR72 485 aa17.67■□□□□ 0.42
RAB40B-203ENST00000570676 SH3RF1Q7Z6J0 888 aa17.67■□□□□ 0.42
RAB40B-203ENST00000570676 KRT23Q9C075 422 aa17.67■□□□□ 0.42
RAB40B-203ENST00000570676 LSG1Q9H089 658 aaKnown RBP17.67■□□□□ 0.42
RAB40B-203ENST00000570676 CPVLQ9H3G5 476 aa17.67■□□□□ 0.42
RAB40B-203ENST00000570676 SZT2Q5T011 3432 aa17.66■□□□□ 0.42
RAB40B-203ENST00000570676 C6orf222P0C671 652 aaPredicted RBP17.66■□□□□ 0.42
RAB40B-203ENST00000570676 NKX3-2P78367 333 aa17.66■□□□□ 0.42
RAB40B-203ENST00000570676 TLE2Q04725 743 aa17.66■□□□□ 0.42
RAB40B-203ENST00000570676 KCNA10Q16322 511 aa17.66■□□□□ 0.42
RAB40B-203ENST00000570676 FBXO16Q8IX29 292 aaPredicted RBP17.66■□□□□ 0.42
RAB40B-203ENST00000570676 KAT14Q9H8E8 782 aa17.66■□□□□ 0.42
RAB40B-203ENST00000570676 CNNM2Q9H8M5 875 aa17.66■□□□□ 0.42
RAB40B-203ENST00000570676 UPF2Q9HAU5 1272 aaKnown RBP17.66■□□□□ 0.42
RAB40B-203ENST00000570676 PRDM5Q9NQX1 630 aaPredicted RBP17.66■□□□□ 0.42
RAB40B-203ENST00000570676 PRKAG2Q9UGJ0 569 aa17.66■□□□□ 0.42
RAB40B-203ENST00000570676 GNEQ9Y223 722 aaKnown RBP17.66■□□□□ 0.42
RAB40B-203ENST00000570676 TRIM43BA6NCK2 446 aa17.65■□□□□ 0.42
RAB40B-203ENST00000570676 CYP21A2P08686 494 aa17.65■□□□□ 0.42
RAB40B-203ENST00000570676 PTGS1P23219 599 aa17.65■□□□□ 0.42
RAB40B-203ENST00000570676 ALDH5A1P51649 535 aaPredicted RBP17.65■□□□□ 0.42
RAB40B-203ENST00000570676 BAATQ14032 418 aaPredicted RBP17.65■□□□□ 0.42
RAB40B-203ENST00000570676 SEC23AQ15436 765 aa17.65■□□□□ 0.42
RAB40B-203ENST00000570676 CYB5R4Q7L1T6 521 aa17.65■□□□□ 0.42
RAB40B-203ENST00000570676 TRIM43Q96BQ3 446 aaPredicted RBP17.65■□□□□ 0.42
RAB40B-203ENST00000570676 USP26Q9BXU7 913 aa17.65■□□□□ 0.42
RAB40B-203ENST00000570676 STARD7Q9NQZ5 370 aa17.65■□□□□ 0.42
RAB40B-203ENST00000570676 PNMA2Q9UL42 364 aa17.65■□□□□ 0.42
RAB40B-203ENST00000570676 LAMA3Q16787 3333 aa17.64■□□□□ 0.41
RAB40B-203ENST00000570676 ASGR1P07306 291 aa17.64■□□□□ 0.41
RAB40B-203ENST00000570676 TNFAIP2Q03169 654 aa17.64■□□□□ 0.41
RAB40B-203ENST00000570676 CDC37Q16543 378 aaPredicted RBP17.64■□□□□ 0.41
RAB40B-203ENST00000570676 ASPRV1Q53RT3 343 aa17.64■□□□□ 0.41
RAB40B-203ENST00000570676 TAPT1Q6NXT6 567 aa17.64■□□□□ 0.41
RAB40B-203ENST00000570676 MAP4K1Q92918 833 aa17.64■□□□□ 0.41
RAB40B-203ENST00000570676 LBHD1Q9BQE6 289 aaPredicted RBP17.64■□□□□ 0.41
RAB40B-203ENST00000570676 UBA5Q9GZZ9 404 aa17.64■□□□□ 0.41
RAB40B-203ENST00000570676 PDGFCQ9NRA1 345 aa17.64■□□□□ 0.41
RAB40B-203ENST00000570676 TAF6LQ9Y6J9 622 aa17.64■□□□□ 0.41
RAB40B-203ENST00000570676 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
RAB40B-203ENST00000570676 KIAA1217Q5T5P2 1943 aa17.64■□□□□ 0.41
RAB40B-203ENST00000570676 LOC102724159A0A0B4J2E5 919 aa17.63■□□□□ 0.41
RAB40B-203ENST00000570676 PTPDC1A2A3K4 754 aa17.63■□□□□ 0.41
RAB40B-203ENST00000570676 EPB41L2O43491 1005 aaKnown RBP17.63■□□□□ 0.41
RAB40B-203ENST00000570676 PQBP1O60828 265 aaKnown RBP17.63■□□□□ 0.41
RAB40B-203ENST00000570676 CLTBP09497 229 aa17.63■□□□□ 0.41
RAB40B-203ENST00000570676 SMPD1P17405 629 aa17.63■□□□□ 0.41
RAB40B-203ENST00000570676 ITGB8P26012 769 aa17.63■□□□□ 0.41
RAB40B-203ENST00000570676 RPS6P62753 249 aaKnown RBP17.63■□□□□ 0.41
RAB40B-203ENST00000570676 PWP2Q15269 919 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms