RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	STARD7	Q9NQZ5	370 aa		10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	ZNF214	Q9UL59	606 aa	Predicted RBP	10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	ADAMTS5	Q9UNA0	930 aa		10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	TACC3	Q9Y6A5	838 aa		10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	MKI67	P46013	3256 aa	Known RBP	10.1	□□□□□ -0.79
SCAPER-223	ENST00000569784	CLTB	P09497	229 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	ALAS1	P13196	640 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	MCC	P23508	829 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	MFAP1	P55081	439 aa	Known RBP	10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	CTDSPL2	Q05D32	466 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	CCDC174	Q6PII3	467 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	CCDC129	Q6ZRS4	1044 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784		Q7L0L9	218 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	PCSK9	Q8NBP7	692 aa	Known RBP	10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	GMCL1P1	Q8NEA9	526 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	NEDD1	Q8NHV4	660 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	BAD	Q92934	168 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	GLT1D1	Q96MS3	346 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	FAM161B	Q96MY7	647 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	CRBN	Q96SW2	442 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	ACAD9	Q9H845	621 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	TMEM39A	Q9NV64	488 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	SYNPO2	Q9UMS6	1093 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	PCDHB15	Q9Y5E8	787 aa		10.09	□□□□□ -0.79
SCAPER-223	ENST00000569784	SYNGAP1	Q96PV0	1343 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	GREB1L	Q9C091	1923 aa	Predicted RBP	10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784		A0A1W2PQ45	241 aa	Predicted RBP	10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784		A0A1W2PQY0	241 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	TLR3	O15455	904 aa	Known RBP	10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	TAL1	P17542	331 aa	Predicted RBP	10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	OAZ1	P54368	228 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	TLE2	Q04725	743 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	ACVR2B	Q13705	512 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	ZMYM1	Q5SVZ6	1142 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	KCTD1	Q719H9	257 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	PI4K2B	Q8TCG2	481 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	OTUD7A	Q8TE49	926 aa	Predicted RBP	10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	STAG1	Q8WVM7	1258 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	MKL1	Q969V6	931 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	ABHD16B	Q9H3Z7	469 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	RWDD1	Q9H446	243 aa	Predicted RBP	10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	SLC38A10	Q9HBR0	1119 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	RNF146	Q9NTX7	359 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	PHF24	Q9UPV7	400 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	RIPK3	Q9Y572	518 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	TRIOBP	Q9H2D6	2365 aa		10.08	□□□□□ -0.8
SCAPER-223	ENST00000569784	MROH7	Q68CQ1	1323 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	CEP290	O15078	2479 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	MOXD2P	A6NHM9	499 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	ASB14	A6NK59	587 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	ATP2A1	O14983	1001 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	ZEB2	O60315	1214 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	ACLY	P53396	1101 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	TKFC	Q3LXA3	575 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	MCMDC2	Q4G0Z9	681 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	SMYD5	Q6GMV2	418 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	B4GALNT3	Q6L9W6	998 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	NSMF	Q6X4W1	530 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	REPS2	Q8NFH8	660 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	LENG1	Q96BZ8	264 aa	Predicted RBP	10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	RNPC3	Q96LT9	517 aa	Known RBP	10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	TRERF1	Q96PN7	1200 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	MPHOSPH6	Q99547	160 aa	Known RBP	10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	TSEN34	Q9BSV6	310 aa	Known RBP	10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	AP5M1	Q9H0R1	490 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	HELLS	Q9NRZ9	838 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	CCPG1	Q9ULG6	757 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	SMCHD1	A6NHR9	2005 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	SYNRG	Q9UMZ2	1314 aa		10.07	□□□□□ -0.8
SCAPER-223	ENST00000569784	IGKV6D-41	A0A0C4DH26	115 aa		10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	DLL1	O00548	723 aa		10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	DUSP11	O75319	330 aa	Known RBP	10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	ZNF865	P0CJ78	1059 aa	Predicted RBP	10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	FPGS	Q05932	587 aa		10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	SHH	Q15465	462 aa		10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	KCNA10	Q16322	511 aa		10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	CCDC144B	Q3MJ40	725 aa		10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	GNAS	Q5JWF2	1037 aa		10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	RCSD1	Q6JBY9	416 aa		10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	ARMCX2	Q7L311	632 aa		10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	GMCL1	Q96IK5	515 aa		10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	AGBL1	Q96MI9	1066 aa		10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	LNPK	Q9C0E8	428 aa		10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	PDLIM7	Q9NR12	457 aa		10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	STXBP5L	Q9Y2K9	1186 aa		10.06	□□□□□ -0.8
SCAPER-223	ENST00000569784	LTBP2	Q14767	1821 aa		10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	PLIN4	Q96Q06	1357 aa		10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	PTPDC1	A2A3K4	754 aa		10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	SNAI1	O95863	264 aa	Predicted RBP	10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	ASGR1	P07306	291 aa		10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	PBX2	P40425	430 aa		10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	PDE1A	P54750	535 aa		10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	SNAP25	P60880	206 aa		10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	TNFAIP2	Q03169	654 aa		10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	MAMDC4	Q6UXC1	1216 aa		10.05	□□□□□ -0.8
SCAPER-223	ENST00000569784	MFSD6	Q6ZSS7	791 aa		10.05	□□□□□ -0.8

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