RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 MCTP2Q6DN12 878 aa27.04■■□□□ 1.92
RAB40C-212ENST00000569575 CWC22Q9HCG8 908 aaKnown RBP27.04■■□□□ 1.92
RAB40C-212ENST00000569575 TXNRD2Q9NNW7 524 aa27.04■■□□□ 1.92
RAB40C-212ENST00000569575 DAXXQ9UER7 740 aaPredicted RBP27.04■■□□□ 1.92
RAB40C-212ENST00000569575 FDPSP14324 419 aaKnown RBP27.03■■□□□ 1.92
RAB40C-212ENST00000569575 ARHGEF6Q15052 776 aa27.03■■□□□ 1.92
RAB40C-212ENST00000569575 CCAR1Q8IX12 1150 aaKnown RBP27.03■■□□□ 1.92
RAB40C-212ENST00000569575 MOV10L1Q9BXT6 1211 aaKnown RBP27.03■■□□□ 1.92
RAB40C-212ENST00000569575 CALML3P27482 149 aa27.02■■□□□ 1.92
RAB40C-212ENST00000569575 GNA11P29992 359 aa27.02■■□□□ 1.92
RAB40C-212ENST00000569575 HEATR3Q7Z4Q2 680 aa27.02■■□□□ 1.92
RAB40C-212ENST00000569575 ABRAQ8N0Z2 381 aa27.02■■□□□ 1.92
RAB40C-212ENST00000569575 AGBL1Q96MI9 1066 aa27.02■■□□□ 1.92
RAB40C-212ENST00000569575 TRERF1Q96PN7 1200 aa27.02■■□□□ 1.92
RAB40C-212ENST00000569575 ACAD9Q9H845 621 aa27.02■■□□□ 1.92
RAB40C-212ENST00000569575 CPA4Q9UI42 421 aa27.02■■□□□ 1.92
RAB40C-212ENST00000569575 JAK2O60674 1132 aa27.01■■□□□ 1.91
RAB40C-212ENST00000569575 PPP1R11O60927 126 aaPredicted RBP27.01■■□□□ 1.91
RAB40C-212ENST00000569575 GHRHRQ02643 423 aa27.01■■□□□ 1.91
RAB40C-212ENST00000569575 TRIM29Q14134 588 aa27.01■■□□□ 1.91
RAB40C-212ENST00000569575 Q3C1V9 767 aa27.01■■□□□ 1.91
RAB40C-212ENST00000569575 BICD2Q8TD16 824 aa27.01■■□□□ 1.91
RAB40C-212ENST00000569575 ALG1Q9BT22 464 aa27.01■■□□□ 1.91
RAB40C-212ENST00000569575 GNRH1P01148 92 aa27■■□□□ 1.91
RAB40C-212ENST00000569575 ALAS1P13196 640 aa27■■□□□ 1.91
RAB40C-212ENST00000569575 MRPL12P52815 198 aaKnown RBP27■■□□□ 1.91
RAB40C-212ENST00000569575 NAPAP54920 295 aa27■■□□□ 1.91
RAB40C-212ENST00000569575 SNAP25P60880 206 aa27■■□□□ 1.91
RAB40C-212ENST00000569575 SP3Q02447 781 aa27■■□□□ 1.91
RAB40C-212ENST00000569575 KIF22Q14807 665 aa27■■□□□ 1.91
RAB40C-212ENST00000569575 WWC2Q6AWC2 1192 aa27■■□□□ 1.91
RAB40C-212ENST00000569575 PIBF1Q8WXW3 757 aa27■■□□□ 1.91
RAB40C-212ENST00000569575 DDX11Q96FC9 970 aa27■■□□□ 1.91
RAB40C-212ENST00000569575 ZMYND12Q9H0C1 365 aa27■■□□□ 1.91
RAB40C-212ENST00000569575 C6orf50Q9HD87 102 aa27■■□□□ 1.91
RAB40C-212ENST00000569575 PFASO15067 1338 aa26.99■■□□□ 1.91
RAB40C-212ENST00000569575 STXBP3O00186 592 aa26.99■■□□□ 1.91
RAB40C-212ENST00000569575 TBC1D8O95759 1140 aa26.99■■□□□ 1.91
RAB40C-212ENST00000569575 ERCC3P19447 782 aa26.99■■□□□ 1.91
RAB40C-212ENST00000569575 GJB2P29033 226 aa26.99■■□□□ 1.91
RAB40C-212ENST00000569575 USH1GQ495M9 461 aa26.99■■□□□ 1.91
RAB40C-212ENST00000569575 RNF146Q9NTX7 359 aa26.99■■□□□ 1.91
RAB40C-212ENST00000569575 PIK3CDO00329 1044 aa26.98■■□□□ 1.91
RAB40C-212ENST00000569575 NCAPG2Q86XI2 1143 aa26.98■■□□□ 1.91
RAB40C-212ENST00000569575 IVNS1ABPQ9Y6Y0 642 aa26.98■■□□□ 1.91
RAB40C-212ENST00000569575 hCG_1642624A0A1W2PR95 340 aa26.97■■□□□ 1.91
RAB40C-212ENST00000569575 GPR25O00155 361 aa26.97■■□□□ 1.91
RAB40C-212ENST00000569575 FCER1AP12319 257 aa26.97■■□□□ 1.91
RAB40C-212ENST00000569575 CUL5Q93034 780 aa26.97■■□□□ 1.91
RAB40C-212ENST00000569575 COA7Q96BR5 231 aa26.97■■□□□ 1.91
RAB40C-212ENST00000569575 C8orf76Q96K31 380 aa26.97■■□□□ 1.91
RAB40C-212ENST00000569575 PSTPIP2Q9H939 334 aa26.97■■□□□ 1.91
RAB40C-212ENST00000569575 RIC8AQ9NPQ8 531 aa26.97■■□□□ 1.91
RAB40C-212ENST00000569575 RIPK3Q9Y572 518 aa26.97■■□□□ 1.91
RAB40C-212ENST00000569575 FCGRTP55899 365 aa26.96■■□□□ 1.91
RAB40C-212ENST00000569575 LACTBP83111 547 aaPredicted RBP26.96■■□□□ 1.91
RAB40C-212ENST00000569575 KCTD2Q14681 263 aa26.96■■□□□ 1.91
RAB40C-212ENST00000569575 DAGLBQ8NCG7 672 aa26.96■■□□□ 1.91
RAB40C-212ENST00000569575 FBXO18Q8NFZ0 1043 aa26.96■■□□□ 1.91
RAB40C-212ENST00000569575 CLEC4DQ8WXI8 215 aa26.96■■□□□ 1.91
RAB40C-212ENST00000569575 GPKOWQ92917 476 aaPredicted RBP eCLIP26.96■■□□□ 1.91
RAB40C-212ENST00000569575 ERO1AQ96HE7 468 aa26.96■■□□□ 1.91
RAB40C-212ENST00000569575 BRMS1Q9HCU9 246 aa26.96■■□□□ 1.91
RAB40C-212ENST00000569575 SMCO2A6NFE2 343 aa26.95■■□□□ 1.9
RAB40C-212ENST00000569575 NLRP5P59047 1200 aa26.95■■□□□ 1.9
RAB40C-212ENST00000569575 LARP1BQ659C4 914 aaKnown RBP26.95■■□□□ 1.9
RAB40C-212ENST00000569575 PLEKHH3Q7Z736 793 aa26.95■■□□□ 1.9
RAB40C-212ENST00000569575 PHF20Q9BVI0 1012 aa26.95■■□□□ 1.9
RAB40C-212ENST00000569575 SLC5A4Q9NY91 659 aa26.95■■□□□ 1.9
RAB40C-212ENST00000569575 LOC102724159A0A0B4J2E5 919 aa26.94■■□□□ 1.9
RAB40C-212ENST00000569575 SLC15A5A6NIM6 579 aa26.94■■□□□ 1.9
RAB40C-212ENST00000569575 GCOM1H8Y6P7 765 aaPredicted RBP26.94■■□□□ 1.9
RAB40C-212ENST00000569575 FKTNO75072 461 aa26.94■■□□□ 1.9
RAB40C-212ENST00000569575 FOSP01100 380 aaPredicted RBP26.94■■□□□ 1.9
RAB40C-212ENST00000569575 POLR2MP0CAP2 368 aa26.94■■□□□ 1.9
RAB40C-212ENST00000569575 ADCY7P51828 1080 aa26.94■■□□□ 1.9
RAB40C-212ENST00000569575 PWP2Q15269 919 aaKnown RBP26.94■■□□□ 1.9
RAB40C-212ENST00000569575 SAFBQ15424 915 aaKnown RBP eCLIP26.94■■□□□ 1.9
RAB40C-212ENST00000569575 PORCNQ9H237 461 aa26.94■■□□□ 1.9
RAB40C-212ENST00000569575 VPS54Q9P1Q0 977 aa26.94■■□□□ 1.9
RAB40C-212ENST00000569575 HOXD10P28358 340 aa26.93■■□□□ 1.9
RAB40C-212ENST00000569575 HSD17B4P51659 736 aa26.93■■□□□ 1.9
RAB40C-212ENST00000569575 RNF207Q6ZRF8 634 aa26.93■■□□□ 1.9
RAB40C-212ENST00000569575 GPR142Q7Z601 462 aa26.93■■□□□ 1.9
RAB40C-212ENST00000569575 ANKRD35Q8N283 1001 aa26.93■■□□□ 1.9
RAB40C-212ENST00000569575 SOCS4Q8WXH5 440 aa26.93■■□□□ 1.9
RAB40C-212ENST00000569575 R3HDMLQ9H3Y0 253 aa26.93■■□□□ 1.9
RAB40C-212ENST00000569575 PCDHA4Q9UN74 947 aa26.93■■□□□ 1.9
RAB40C-212ENST00000569575 SMCHD1A6NHR9 2005 aa26.92■■□□□ 1.9
RAB40C-212ENST00000569575 PPFIA3O75145 1194 aa26.92■■□□□ 1.9
RAB40C-212ENST00000569575 PTPREP23469 700 aa26.92■■□□□ 1.9
RAB40C-212ENST00000569575 SLC4A3P48751 1232 aa26.92■■□□□ 1.9
RAB40C-212ENST00000569575 AP3B2Q13367 1082 aa26.92■■□□□ 1.9
RAB40C-212ENST00000569575 MMP19Q99542 508 aa26.92■■□□□ 1.9
RAB40C-212ENST00000569575 EFCC1Q9HA90 598 aa26.92■■□□□ 1.9
RAB40C-212ENST00000569575 HOMER2Q9NSB8 354 aa26.92■■□□□ 1.9
RAB40C-212ENST00000569575 DIS3Q9Y2L1 958 aaKnown RBP26.92■■□□□ 1.9
RAB40C-212ENST00000569575 MMP1P03956 469 aa26.91■■□□□ 1.9
RAB40C-212ENST00000569575 PRMT2P55345 433 aa26.91■■□□□ 1.9
RAB40C-212ENST00000569575 MUM1L1Q5H9M0 696 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms