RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 PTF1AQ7RTS3 328 aa8.85□□□□□ -0.99
LINC00559-201ENST00000569476 AMIGO3Q86WK7 504 aa8.85□□□□□ -0.99
LINC00559-201ENST00000569476 STAG2Q8N3U4 1231 aa8.85□□□□□ -0.99
LINC00559-201ENST00000569476 ZC3H12CQ9C0D7 883 aaKnown RBP8.85□□□□□ -0.99
LINC00559-201ENST00000569476 NT5C3AQ9H0P0 336 aa8.85□□□□□ -0.99
LINC00559-201ENST00000569476 SERPINA10Q9UK55 444 aa8.85□□□□□ -0.99
LINC00559-201ENST00000569476 TXNRD1Q16881 649 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 CCDC82Q8N4S0 544 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 RUBCNQ92622 972 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 ERCC4Q92889 916 aaPredicted RBP8.84□□□□□ -0.99
LINC00559-201ENST00000569476 SERPINB13Q9UIV8 391 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 CTNND2Q9UQB3 1225 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 ATAD5Q96QE3 1844 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 USP17L3A6NCW0 530 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 USP17L4A6NCW7 530 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 KCNJ18B7U540 433 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 FOSP01100 380 aaPredicted RBP8.84□□□□□ -0.99
LINC00559-201ENST00000569476 CD44P16070 742 aaKnown RBP8.84□□□□□ -0.99
LINC00559-201ENST00000569476 CASQ1P31415 396 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 LRRC63Q05C16 580 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 KCNJ12Q14500 433 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 DIXDC1Q155Q3 683 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 SLC35G1Q2M3R5 365 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 UNC13DQ70J99 1090 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 USP17L1Q7RTZ2 530 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 CUL5Q93034 780 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 MED15Q96RN5 788 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 FAM53CQ9NYF3 392 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 PARP3Q9Y6F1 533 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 KRT31Q15323 416 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 NAALADL2Q58DX5 795 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 USP49Q70CQ1 688 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 ZSCAN29Q8IWY8 852 aaPredicted RBP8.84□□□□□ -0.99
LINC00559-201ENST00000569476 CEP95Q96GE4 821 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 DNAJC7Q99615 494 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 MAF1Q9H063 256 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 QTRT2Q9H974 415 aaKnown RBP8.84□□□□□ -0.99
LINC00559-201ENST00000569476 GINM1Q9NU53 330 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 EXOC1Q9NV70 894 aa8.84□□□□□ -0.99
LINC00559-201ENST00000569476 MYH4Q9Y623 1939 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 WTIPA6NIX2 430 aaPredicted RBP8.83□□□□□ -1
LINC00559-201ENST00000569476 USP27XA6NNY8 438 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 PLA2G6O60733 806 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 GNA14O95837 355 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 DPP8Q6V1X1 898 aaPredicted RBP8.83□□□□□ -1
LINC00559-201ENST00000569476 SV2BQ7L1I2 683 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 CCDC170Q8IYT3 715 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 CEP112Q8N8E3 955 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 GMCL1Q96IK5 515 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 NUCKS1Q9H1E3 243 aaKnown RBP8.83□□□□□ -1
LINC00559-201ENST00000569476 ATF5Q9Y2D1 282 aaPredicted RBP8.83□□□□□ -1
LINC00559-201ENST00000569476 KIF13BQ9NQT8 1826 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 AFMP43652 599 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 SPECC1Q5M775 1068 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 SLFN12Q8IYM2 578 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 GUF1Q8N442 669 aaKnown RBP8.83□□□□□ -1
LINC00559-201ENST00000569476 SAMD3Q8N6K7 520 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 PDILTQ8N807 584 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 P2RX5Q93086 422 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 CNKSR1Q969H4 720 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 ERGIC2Q96RQ1 377 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 KANSL2Q9H9L4 492 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 SAMSN1Q9NSI8 373 aaKnown RBP8.83□□□□□ -1
LINC00559-201ENST00000569476 CAPN11Q9UMQ6 739 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 C6orf229H3BNL8 230 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 ZBTB5O15062 677 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 MAP3K9P80192 1104 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 KMT5BQ4FZB7 885 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 TATDN1Q6P1N9 297 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 BTNL9Q6UXG8 535 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 PPP4R3CPQ6ZMV5 832 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 HOMER1Q86YM7 354 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 ZNF507Q8TCN5 953 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 FBXO41Q8TF61 875 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 PNMA2Q9UL42 364 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 STX8Q9UNK0 236 aa8.83□□□□□ -1
LINC00559-201ENST00000569476 TMEM232C9JQI7 657 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 PPP2R3AQ06190 1150 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 GABPB1Q06547 395 aaPredicted RBP8.82□□□□□ -1
LINC00559-201ENST00000569476 MEA1Q16626 185 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 INF2Q27J81 1249 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 GPKOWQ92917 476 aaPredicted RBP eCLIP8.82□□□□□ -1
LINC00559-201ENST00000569476 RPGRIP1Q96KN7 1286 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 TSGA10Q9BZW7 698 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 TRIM9Q9C026 710 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 RABGAP1Q9Y3P9 1069 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 LOXHD1Q8IVV2 1947 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 KIF5CO60282 957 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 H2AFXP16104 143 aaPredicted RBP8.82□□□□□ -1
LINC00559-201ENST00000569476 ATP2B1P20020 1258 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 HNRNPH3P31942 346 aaKnown RBP8.82□□□□□ -1
LINC00559-201ENST00000569476 SHMT1P34896 483 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 KRT83P78385 493 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 CALCRLQ16602 461 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 WHAMMP3Q1A5X7 153 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 FKBP1CQ5VVH2 108 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 TYW1BQ6NUM6 668 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 TTI2Q6NXR4 508 aa8.82□□□□□ -1
LINC00559-201ENST00000569476 ZC3H3Q8IXZ2 948 aaKnown RBP8.82□□□□□ -1
LINC00559-201ENST00000569476 GPR161Q8N6U8 529 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms