RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 LENG1Q96BZ8 264 aaPredicted RBP10.53□□□□□ -0.72
GTF3C1-210ENST00000569394 NEK1Q96PY6 1258 aa10.53□□□□□ -0.72
GTF3C1-210ENST00000569394 RANBP17Q9H2T7 1088 aaKnown RBP10.53□□□□□ -0.72
GTF3C1-210ENST00000569394 ACAD9Q9H845 621 aa10.53□□□□□ -0.72
GTF3C1-210ENST00000569394 SLC5A4Q9NY91 659 aa10.53□□□□□ -0.72
GTF3C1-210ENST00000569394 MYH6P13533 1939 aa10.52□□□□□ -0.72
GTF3C1-210ENST00000569394 KLRF2D3W0D1 207 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 POTEB2H3BUK9 544 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 FARP2O94887 1054 aaPredicted RBP10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 ICAM1P05362 532 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 SNHG28P0DPA3 235 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 FGD1P98174 961 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 BAATQ14032 418 aaPredicted RBP10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 ZNF792Q3KQV3 632 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 GPATCH4Q5T3I0 446 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 BTNL9Q6UXG8 535 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 CATIPQ7Z7H3 387 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 TRMT44Q8IYL2 757 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 ZNF654Q8IZM8 581 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 CHST13Q8NET6 341 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 IGDCC4Q8TDY8 1250 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 TBC1D5Q92609 795 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 DPF3Q92784 378 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 PAWRQ96IZ0 340 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 JAKMIP1Q96N16 626 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 TINF2Q9BSI4 451 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 JMJD4Q9H9V9 463 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 LY9Q9HBG7 655 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 A1CFQ9NQ94 594 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 PAK6Q9NQU5 681 aaPredicted RBP10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 MAD2L2Q9UI95 211 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 ZHX1Q9UKY1 873 aaPredicted RBP10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 BAZ2BQ9UIF8 2168 aaKnown RBP10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 MCM3APO60318 1980 aa10.52□□□□□ -0.73
GTF3C1-210ENST00000569394 hCG_1642624A0A1W2PR95 340 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 SOWAHBA6NEL2 793 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 SH2B2O14492 632 aaPredicted RBP10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 ATP2A1O14983 1001 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 PLA2G6O60733 806 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 HOXC6P09630 235 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 PTGS1P23219 599 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 COPB2P35606 906 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 OAZ1P54368 228 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 QRICH1Q2TAL8 776 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 ASPRV1Q53RT3 343 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 GJC2Q5T442 439 aaPredicted RBP10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 MAP3K21Q5TCX8 1036 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 SLC30A10Q6XR72 485 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 MICU3Q86XE3 530 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 PIGSQ96S52 555 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 LARP6Q9BRS8 491 aaKnown RBP10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 FBXO40Q9UH90 709 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 SNX14Q9Y5W7 946 aa10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 RBBP6Q7Z6E9 1792 aaKnown RBP10.51□□□□□ -0.73
GTF3C1-210ENST00000569394 PPFIA3O75145 1194 aa10.5□□□□□ -0.73
GTF3C1-210ENST00000569394 PLEKHA8P1O95397 391 aa10.5□□□□□ -0.73
GTF3C1-210ENST00000569394 FDX1P10109 184 aa10.5□□□□□ -0.73
GTF3C1-210ENST00000569394 CYBAP13498 195 aa10.5□□□□□ -0.73
GTF3C1-210ENST00000569394 GRM4Q14833 912 aa10.5□□□□□ -0.73
GTF3C1-210ENST00000569394 OLFML2BQ68BL8 750 aa10.5□□□□□ -0.73
GTF3C1-210ENST00000569394 RNF207Q6ZRF8 634 aa10.5□□□□□ -0.73
GTF3C1-210ENST00000569394 NOL8Q76FK4 1167 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-210ENST00000569394 FBXO11Q86XK2 927 aa10.5□□□□□ -0.73
GTF3C1-210ENST00000569394 ABRAQ8N0Z2 381 aa10.5□□□□□ -0.73
GTF3C1-210ENST00000569394 DDX20Q9UHI6 824 aaKnown RBP10.5□□□□□ -0.73
GTF3C1-210ENST00000569394 CNPY2Q9Y2B0 182 aa10.5□□□□□ -0.73
GTF3C1-210ENST00000569394 SLC12A7Q9Y666 1083 aa10.5□□□□□ -0.73
GTF3C1-210ENST00000569394 STK24Q9Y6E0 443 aa10.5□□□□□ -0.73
GTF3C1-210ENST00000569394 ZNF236Q9UL36 1845 aa10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 PALM3A6NDB9 673 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 REC8O95072 547 aa10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 SNAI1O95863 264 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 PGK1P00558 417 aa10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 ATN1P54259 1190 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 IRX5P78411 483 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 TROAPQ12815 778 aa10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 SLC35G1Q2M3R5 365 aa10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 TKFCQ3LXA3 575 aa10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 LHX8Q68G74 356 aa10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 Q6ZUG5 572 aa10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 ARMCX2Q7L311 632 aa10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 CTCFLQ8NI51 663 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 CLEC4DQ8WXI8 215 aa10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 FERMT2Q96AC1 680 aa10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 FGD4Q96M96 766 aa10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 CYP39A1Q9NYL5 469 aa10.49□□□□□ -0.73
GTF3C1-210ENST00000569394 DNAJC25-GNG10A0A024R161 153 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 CYTH3O43739 400 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 PPP1R11O60927 126 aaPredicted RBP10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 CFBP00751 764 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 CASTP20810 708 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 HSPA4P34932 840 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 RPS6P62753 249 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 APOBRQ0VD83 1088 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 TMEM63BQ5T3F8 832 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 BLOC1S2Q6QNY1 142 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 SYNE3Q6ZMZ3 975 aa10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 DHX32Q7L7V1 743 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-210ENST00000569394 FBXO16Q8IX29 292 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms