RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 IRX5P78411 483 aaPredicted RBP18.69■□□□□ 0.58
HERPUD1-215ENST00000568676 TFAP4Q01664 338 aa18.69■□□□□ 0.58
HERPUD1-215ENST00000568676 ITGA7Q13683 1181 aa18.69■□□□□ 0.58
HERPUD1-215ENST00000568676 CXCL17Q6UXB2 119 aa18.69■□□□□ 0.58
HERPUD1-215ENST00000568676 RPUSD2Q8IZ73 545 aaKnown RBP18.69■□□□□ 0.58
HERPUD1-215ENST00000568676 TRERF1Q96PN7 1200 aa18.69■□□□□ 0.58
HERPUD1-215ENST00000568676 THEGQ9P2T0 379 aa18.69■□□□□ 0.58
HERPUD1-215ENST00000568676 ISY1Q9ULR0 285 aaKnown RBP18.69■□□□□ 0.58
HERPUD1-215ENST00000568676 ZNF536O15090 1300 aa18.69■□□□□ 0.58
HERPUD1-215ENST00000568676 LOC102724159A0A0B4J2E5 919 aa18.68■□□□□ 0.58
HERPUD1-215ENST00000568676 SOWAHBA6NEL2 793 aa18.68■□□□□ 0.58
HERPUD1-215ENST00000568676 ACRP10323 421 aa18.68■□□□□ 0.58
HERPUD1-215ENST00000568676 CYP2C18P33260 490 aa18.68■□□□□ 0.58
HERPUD1-215ENST00000568676 PBX2P40425 430 aa18.68■□□□□ 0.58
HERPUD1-215ENST00000568676 BEX3Q00994 111 aa18.68■□□□□ 0.58
HERPUD1-215ENST00000568676 PPARAQ07869 468 aa18.68■□□□□ 0.58
HERPUD1-215ENST00000568676 PWP2Q15269 919 aaKnown RBP18.68■□□□□ 0.58
HERPUD1-215ENST00000568676 AGBL1Q96MI9 1066 aa18.68■□□□□ 0.58
HERPUD1-215ENST00000568676 PRDM12Q9H4Q4 367 aa18.68■□□□□ 0.58
HERPUD1-215ENST00000568676 SLC28A3Q9HAS3 691 aa18.68■□□□□ 0.58
HERPUD1-215ENST00000568676 MCM3APO60318 1980 aa18.68■□□□□ 0.58
HERPUD1-215ENST00000568676 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.67■□□□□ 0.58
HERPUD1-215ENST00000568676 GRXCR1A8MXD5 290 aa18.67■□□□□ 0.58
HERPUD1-215ENST00000568676 PFKMP08237 780 aa18.67■□□□□ 0.58
HERPUD1-215ENST00000568676 RCSD1Q6JBY9 416 aa18.67■□□□□ 0.58
HERPUD1-215ENST00000568676 VTA1Q9NP79 307 aa18.67■□□□□ 0.58
HERPUD1-215ENST00000568676 ASTN1O14525 1302 aa18.67■□□□□ 0.58
HERPUD1-215ENST00000568676 TTC28Q96AY4 2481 aa18.66■□□□□ 0.58
HERPUD1-215ENST00000568676 DYNC1LI2O43237 492 aaPredicted RBP18.66■□□□□ 0.58
HERPUD1-215ENST00000568676 SUPT20HL2P0C7V6 817 aa18.66■□□□□ 0.58
HERPUD1-215ENST00000568676 ALAS1P13196 640 aa18.66■□□□□ 0.58
HERPUD1-215ENST00000568676 SMPD1P17405 629 aa18.66■□□□□ 0.58
HERPUD1-215ENST00000568676 MCCP23508 829 aa18.66■□□□□ 0.58
HERPUD1-215ENST00000568676 MRPS5P82675 430 aaKnown RBP18.66■□□□□ 0.58
HERPUD1-215ENST00000568676 MORC4Q8TE76 937 aa18.66■□□□□ 0.58
HERPUD1-215ENST00000568676 ASB2Q96Q27 587 aa18.66■□□□□ 0.58
HERPUD1-215ENST00000568676 TSPYL2Q9H2G4 693 aaPredicted RBP18.66■□□□□ 0.58
HERPUD1-215ENST00000568676 CYP39A1Q9NYL5 469 aa18.66■□□□□ 0.58
HERPUD1-215ENST00000568676 ADD3Q9UEY8 706 aaKnown RBP18.66■□□□□ 0.58
HERPUD1-215ENST00000568676 STX8Q9UNK0 236 aa18.66■□□□□ 0.58
HERPUD1-215ENST00000568676 TSPY2A6NKD2 308 aa18.65■□□□□ 0.58
HERPUD1-215ENST00000568676 DIEXFQ68CQ4 756 aaKnown RBP18.65■□□□□ 0.58
HERPUD1-215ENST00000568676 TAPT1Q6NXT6 567 aa18.65■□□□□ 0.58
HERPUD1-215ENST00000568676 NOC4LQ9BVI4 516 aaKnown RBP18.65■□□□□ 0.58
HERPUD1-215ENST00000568676 PNMA2Q9UL42 364 aa18.65■□□□□ 0.58
HERPUD1-215ENST00000568676 PRR12Q9ULL5 1215 aa18.65■□□□□ 0.58
HERPUD1-215ENST00000568676 ICAM1P05362 532 aa18.64■□□□□ 0.57
HERPUD1-215ENST00000568676 ZMYM1Q5SVZ6 1142 aa18.64■□□□□ 0.57
HERPUD1-215ENST00000568676 IL27Q8NEV9 243 aa18.64■□□□□ 0.57
HERPUD1-215ENST00000568676 FSD1Q9BTV5 496 aa18.64■□□□□ 0.57
HERPUD1-215ENST00000568676 POLR3EQ9NVU0 708 aa18.64■□□□□ 0.57
HERPUD1-215ENST00000568676 CXXC1Q9P0U4 656 aaPredicted RBP18.64■□□□□ 0.57
HERPUD1-215ENST00000568676 CCPG1Q9ULG6 757 aa18.64■□□□□ 0.57
HERPUD1-215ENST00000568676 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.64■□□□□ 0.57
HERPUD1-215ENST00000568676 SLC4A7Q9Y6M7 1214 aa18.64■□□□□ 0.57
HERPUD1-215ENST00000568676 LRRC37A2A6NM11 1700 aa18.63■□□□□ 0.57
HERPUD1-215ENST00000568676 MUC3AQ02505 3323 aa18.63■□□□□ 0.57
HERPUD1-215ENST00000568676 B4GALT4O60513 344 aa18.63■□□□□ 0.57
HERPUD1-215ENST00000568676 NOVP48745 357 aa18.63■□□□□ 0.57
HERPUD1-215ENST00000568676 DUSP28Q4G0W2 176 aa18.63■□□□□ 0.57
HERPUD1-215ENST00000568676 TSHZ3Q63HK5 1081 aa18.63■□□□□ 0.57
HERPUD1-215ENST00000568676 KIAA1211Q6ZU35 1233 aa18.63■□□□□ 0.57
HERPUD1-215ENST00000568676 KCTD1Q719H9 257 aa18.63■□□□□ 0.57
HERPUD1-215ENST00000568676 OTOP2Q7RTS6 562 aa18.63■□□□□ 0.57
HERPUD1-215ENST00000568676 DCAF4Q8WV16 495 aa18.63■□□□□ 0.57
HERPUD1-215ENST00000568676 PPM1EQ8WY54 764 aa18.63■□□□□ 0.57
HERPUD1-215ENST00000568676 NKX2-4Q9H2Z4 354 aa18.63■□□□□ 0.57
HERPUD1-215ENST00000568676 PCDHA11Q9Y5I1 949 aa18.63■□□□□ 0.57
HERPUD1-215ENST00000568676 GRIN2DO15399 1336 aa18.63■□□□□ 0.57
HERPUD1-215ENST00000568676 IGFBP4P22692 258 aa18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 CPT1AP50416 773 aa18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 CCL23P55773 120 aa18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 ADGRE1Q14246 886 aa18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 BRDTQ58F21 947 aaPredicted RBP18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 MUM1L1Q5H9M0 696 aa18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 C20orf194Q5TEA3 1177 aa18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 NSMFQ6X4W1 530 aa18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 FBXO16Q8IX29 292 aaPredicted RBP18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 PI4K2BQ8TCG2 481 aa18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 SEC62Q99442 399 aaKnown RBP18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 MPHOSPH6Q99547 160 aaKnown RBP18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 WNT8AQ9H1J5 351 aa18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 ALDH8A1Q9H2A2 487 aaPredicted RBP18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 PDGFCQ9NRA1 345 aa18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 ANAPC4Q9UJX5 808 aa18.62■□□□□ 0.57
HERPUD1-215ENST00000568676 UMODL1Q5DID0 1318 aa18.61■□□□□ 0.57
HERPUD1-215ENST00000568676 RAD50Q92878 1312 aa18.61■□□□□ 0.57
HERPUD1-215ENST00000568676 PPP2R2DQ66LE6 453 aa18.61■□□□□ 0.57
HERPUD1-215ENST00000568676 BTNL9Q6UXG8 535 aa18.61■□□□□ 0.57
HERPUD1-215ENST00000568676 TRPV6Q9H1D0 765 aa18.61■□□□□ 0.57
HERPUD1-215ENST00000568676 RANBP17Q9H2T7 1088 aaKnown RBP18.61■□□□□ 0.57
HERPUD1-215ENST00000568676 IL17RBQ9NRM6 502 aa18.61■□□□□ 0.57
HERPUD1-215ENST00000568676 YBX2Q9Y2T7 364 aaKnown RBP18.61■□□□□ 0.57
HERPUD1-215ENST00000568676 NKRFO15226 690 aaKnown RBP eCLIP18.6■□□□□ 0.57
HERPUD1-215ENST00000568676 ORC4O43929 436 aa18.6■□□□□ 0.57
HERPUD1-215ENST00000568676 KPNA6O60684 536 aa18.6■□□□□ 0.57
HERPUD1-215ENST00000568676 RFC2P35250 354 aa18.6■□□□□ 0.57
HERPUD1-215ENST00000568676 AAK1Q2M2I8 961 aa18.6■□□□□ 0.57
HERPUD1-215ENST00000568676 EEPD1Q7L9B9 569 aa18.6■□□□□ 0.57
HERPUD1-215ENST00000568676 ADAMTS19Q8TE59 1207 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms