RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 BMP1P13497 986 aa14.07□□□□□ -0.16
GTF3C1-209ENST00000568569 ATP2A2P16615 1042 aaKnown RBP14.07□□□□□ -0.16
GTF3C1-209ENST00000568569 STAT2P52630 851 aa14.07□□□□□ -0.16
GTF3C1-209ENST00000568569 NECAB3Q96P71 396 aaPredicted RBP14.07□□□□□ -0.16
GTF3C1-209ENST00000568569 TRPV6Q9H1D0 765 aa14.07□□□□□ -0.16
GTF3C1-209ENST00000568569 RNF146Q9NTX7 359 aa14.07□□□□□ -0.16
GTF3C1-209ENST00000568569 COG6Q9Y2V7 657 aa14.07□□□□□ -0.16
GTF3C1-209ENST00000568569 SOWAHBA6NEL2 793 aa14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 ZBBXA8MT70 800 aa14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 DYNC1LI2O43237 492 aaPredicted RBP14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 PFKMP08237 780 aa14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 MYOGP15173 224 aa14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 SMPD1P17405 629 aa14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 TDO2P48775 406 aa14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 TFF2Q03403 129 aa14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 SKIV2LQ15477 1246 aaKnown RBP14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 TKFCQ3LXA3 575 aa14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 SLFN13Q68D06 897 aa14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 APPBP2Q92624 585 aa14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 ZBTB40Q9NUA8 1239 aa14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 ISY1Q9ULR0 285 aaKnown RBP14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 DDX19BQ9UMR2 479 aa14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 Q9Y3F1 56 aa14.06□□□□□ -0.16
GTF3C1-209ENST00000568569 TMEM232C9JQI7 657 aa14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 ERC2O15083 957 aa14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 GTPBP6O43824 516 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 PRDM1O75626 825 aa14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 GNAT2P19087 354 aa14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 PSMC6P62333 389 aa14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 HNRNPUQ00839 825 aaKnown RBP eCLIP14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 IKQ13123 557 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 IQSEC1Q6DN90 963 aa14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 FAM160B2Q86V87 743 aa14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 CHURC1Q8WUH1 139 aa14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 OSBP2Q969R2 916 aa14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 ALDH8A1Q9H2A2 487 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 EPB41L4AQ9HCS5 686 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 ZNF536O15090 1300 aa14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 PLIN4Q96Q06 1357 aa14.05□□□□□ -0.16
GTF3C1-209ENST00000568569 MCM3APO60318 1980 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 TRANK1O15050 2925 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 GPAA1O43292 621 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 SUPT20HL2P0C7V6 817 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 TSPY3P0CV98 308 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 TSPY8P0CW00 308 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 POU3F3P20264 500 aaPredicted RBP14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 PTGS1P23219 599 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 KCNQ1P51787 676 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 TMEM67Q5HYA8 995 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 EEPD1Q7L9B9 569 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 FBXO16Q8IX29 292 aaPredicted RBP14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 KBTBD3Q8NAB2 608 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 VWCEQ96DN2 955 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 SCLYQ96I15 445 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 GMCL1Q96IK5 515 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 AGBL1Q96MI9 1066 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 TRERF1Q96PN7 1200 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 LRRCC1Q9C099 1032 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 VTA1Q9NP79 307 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 PDGFCQ9NRA1 345 aa14.04□□□□□ -0.16
GTF3C1-209ENST00000568569 APPP05067 770 aa14.03□□□□□ -0.16
GTF3C1-209ENST00000568569 CA3P07451 260 aa14.03□□□□□ -0.16
GTF3C1-209ENST00000568569 ALAS1P13196 640 aa14.03□□□□□ -0.16
GTF3C1-209ENST00000568569 SLC1A4P43007 532 aa14.03□□□□□ -0.16
GTF3C1-209ENST00000568569 PDE4BQ07343 736 aa14.03□□□□□ -0.16
GTF3C1-209ENST00000568569 TTLL4Q14679 1199 aa14.03□□□□□ -0.16
GTF3C1-209ENST00000568569 TAPT1Q6NXT6 567 aa14.03□□□□□ -0.16
GTF3C1-209ENST00000568569 NEDD1Q8NHV4 660 aa14.03□□□□□ -0.16
GTF3C1-209ENST00000568569 STAG1Q8WVM7 1258 aa14.03□□□□□ -0.16
GTF3C1-209ENST00000568569 CHMP4BQ9H444 224 aaKnown RBP14.03□□□□□ -0.16
GTF3C1-209ENST00000568569 ECHDC1Q9NTX5 307 aa14.03□□□□□ -0.16
GTF3C1-209ENST00000568569 CYP39A1Q9NYL5 469 aa14.03□□□□□ -0.16
GTF3C1-209ENST00000568569 MTCH2Q9Y6C9 303 aa14.03□□□□□ -0.16
GTF3C1-209ENST00000568569 DDX49Q9Y6V7 483 aaKnown RBP14.03□□□□□ -0.16
GTF3C1-209ENST00000568569 PRRC2BQ5JSZ5 2229 aaKnown RBP14.02□□□□□ -0.16
GTF3C1-209ENST00000568569 TNKSO95271 1327 aa14.02□□□□□ -0.17
GTF3C1-209ENST00000568569 PLA2G6O60733 806 aa14.02□□□□□ -0.17
GTF3C1-209ENST00000568569 ZFYP08048 801 aaPredicted RBP14.02□□□□□ -0.17
GTF3C1-209ENST00000568569 CYP2C9P11712 490 aa14.02□□□□□ -0.17
GTF3C1-209ENST00000568569 ACTN1P12814 892 aa14.02□□□□□ -0.17
GTF3C1-209ENST00000568569 HOXD11P31277 338 aaPredicted RBP14.02□□□□□ -0.17
GTF3C1-209ENST00000568569 PPP4R3BQ5MIZ7 849 aa14.02□□□□□ -0.17
GTF3C1-209ENST00000568569 KIAA1211Q6ZU35 1233 aa14.02□□□□□ -0.17
GTF3C1-209ENST00000568569 SLC9A7Q96T83 725 aa14.02□□□□□ -0.17
GTF3C1-209ENST00000568569 TRMT13Q9NUP7 481 aaKnown RBP14.02□□□□□ -0.17
GTF3C1-209ENST00000568569 POLR3EQ9NVU0 708 aa14.02□□□□□ -0.17
GTF3C1-209ENST00000568569 COG5Q9UP83 839 aa14.02□□□□□ -0.17
GTF3C1-209ENST00000568569 HCN4Q9Y3Q4 1203 aa14.02□□□□□ -0.17
GTF3C1-209ENST00000568569 ARIH1Q9Y4X5 557 aaPredicted RBP14.02□□□□□ -0.17
GTF3C1-209ENST00000568569 RFXAPO00287 272 aa14.01□□□□□ -0.17
GTF3C1-209ENST00000568569 RNF113AO15541 343 aaKnown RBP14.01□□□□□ -0.17
GTF3C1-209ENST00000568569 SLC3A2P08195 630 aaKnown RBP14.01□□□□□ -0.17
GTF3C1-209ENST00000568569 MCCP23508 829 aa14.01□□□□□ -0.17
GTF3C1-209ENST00000568569 RFC2P35250 354 aa14.01□□□□□ -0.17
GTF3C1-209ENST00000568569 CPT1AP50416 773 aa14.01□□□□□ -0.17
GTF3C1-209ENST00000568569 PURAQ00577 322 aaKnown RBP14.01□□□□□ -0.17
GTF3C1-209ENST00000568569 TFAP4Q01664 338 aa14.01□□□□□ -0.17
GTF3C1-209ENST00000568569 DUSP28Q4G0W2 176 aa14.01□□□□□ -0.17
GTF3C1-209ENST00000568569 MUM1L1Q5H9M0 696 aa14.01□□□□□ -0.17
GTF3C1-209ENST00000568569 TMEM63BQ5T3F8 832 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms