RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 PLXNA1Q9UIW2 1896 aa17.57■□□□□ 0.4
CCNDBP1-213ENST00000568507 TRIM43BA6NCK2 446 aa17.57■□□□□ 0.4
CCNDBP1-213ENST00000568507 GJA9P57773 515 aa17.57■□□□□ 0.4
CCNDBP1-213ENST00000568507 TNFAIP2Q03169 654 aa17.57■□□□□ 0.4
CCNDBP1-213ENST00000568507 IMMTQ16891 758 aaKnown RBP17.57■□□□□ 0.4
CCNDBP1-213ENST00000568507 GNASQ5JWF2 1037 aa17.57■□□□□ 0.4
CCNDBP1-213ENST00000568507 SH3RF1Q7Z6J0 888 aa17.57■□□□□ 0.4
CCNDBP1-213ENST00000568507 TRIM43Q96BQ3 446 aaPredicted RBP17.57■□□□□ 0.4
CCNDBP1-213ENST00000568507 DSCC1Q9BVC3 393 aa17.57■□□□□ 0.4
CCNDBP1-213ENST00000568507 PNMA2Q9UL42 364 aa17.57■□□□□ 0.4
CCNDBP1-213ENST00000568507 NEDD4P46934 1319 aa17.57■□□□□ 0.4
CCNDBP1-213ENST00000568507 MYADML2A6NDP7 307 aa17.56■□□□□ 0.4
CCNDBP1-213ENST00000568507 DCDC2CA8MYV0 355 aa17.56■□□□□ 0.4
CCNDBP1-213ENST00000568507 CST5P28325 142 aaPredicted RBP17.56■□□□□ 0.4
CCNDBP1-213ENST00000568507 ZNF543Q08ER8 600 aa17.56■□□□□ 0.4
CCNDBP1-213ENST00000568507 CCSAPQ6IQ19 270 aaPredicted RBP17.56■□□□□ 0.4
CCNDBP1-213ENST00000568507 DGKHQ86XP1 1220 aa17.56■□□□□ 0.4
CCNDBP1-213ENST00000568507 DEFB123Q8N688 67 aa17.56■□□□□ 0.4
CCNDBP1-213ENST00000568507 KATNBL1Q9H079 304 aa17.56■□□□□ 0.4
CCNDBP1-213ENST00000568507 UPF3AQ9H1J1 476 aaKnown RBP17.56■□□□□ 0.4
CCNDBP1-213ENST00000568507 TMEM39AQ9NV64 488 aa17.56■□□□□ 0.4
CCNDBP1-213ENST00000568507 ADD3Q9UEY8 706 aaKnown RBP17.56■□□□□ 0.4
CCNDBP1-213ENST00000568507 ADCY6O43306 1168 aa17.55■□□□□ 0.4
CCNDBP1-213ENST00000568507 KDM4AO75164 1064 aa17.55■□□□□ 0.4
CCNDBP1-213ENST00000568507 ASGR1P07306 291 aa17.55■□□□□ 0.4
CCNDBP1-213ENST00000568507 RAG1P15918 1043 aa17.55■□□□□ 0.4
CCNDBP1-213ENST00000568507 BAATQ14032 418 aaPredicted RBP17.55■□□□□ 0.4
CCNDBP1-213ENST00000568507 GPATCH4Q5T3I0 446 aaKnown RBP17.55■□□□□ 0.4
CCNDBP1-213ENST00000568507 TOX2Q96NM4 488 aa17.55■□□□□ 0.4
CCNDBP1-213ENST00000568507 AP5M1Q9H0R1 490 aa17.55■□□□□ 0.4
CCNDBP1-213ENST00000568507 KAT14Q9H8E8 782 aa17.55■□□□□ 0.4
CCNDBP1-213ENST00000568507 ELP1O95163 1332 aa17.55■□□□□ 0.4
CCNDBP1-213ENST00000568507 SMCHD1A6NHR9 2005 aa17.54■□□□□ 0.4
CCNDBP1-213ENST00000568507 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.54■□□□□ 0.4
CCNDBP1-213ENST00000568507 PTPDC1A2A3K4 754 aa17.54■□□□□ 0.4
CCNDBP1-213ENST00000568507 SNHG28P0DPA3 235 aa17.54■□□□□ 0.4
CCNDBP1-213ENST00000568507 IRX5P78411 483 aaPredicted RBP17.54■□□□□ 0.4
CCNDBP1-213ENST00000568507 IRX6P78412 446 aaPredicted RBP17.54■□□□□ 0.4
CCNDBP1-213ENST00000568507 IQSEC1Q6DN90 963 aa17.54■□□□□ 0.4
CCNDBP1-213ENST00000568507 EEPD1Q7L9B9 569 aa17.54■□□□□ 0.4
CCNDBP1-213ENST00000568507 ANKRD33Q7Z3H0 272 aa17.54■□□□□ 0.4
CCNDBP1-213ENST00000568507 ZSCAN10Q96SZ4 725 aaPredicted RBP17.54■□□□□ 0.4
CCNDBP1-213ENST00000568507 MROH7Q68CQ1 1323 aa17.54■□□□□ 0.4
CCNDBP1-213ENST00000568507 B4E1Z4 1266 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 KIAA0355O15063 1070 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 Q7L0L9 218 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 PNMA1Q8ND90 353 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 PURBQ96QR8 312 aaKnown RBP17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 KRT23Q9C075 422 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 CNNM2Q9H8M5 875 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 A0A0U1RQG5 324 aaPredicted RBP17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 NFIBO00712 420 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 DYNC1LI2O43237 492 aaPredicted RBP17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 ZEB2O60315 1214 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 GOLGA8HP0CJ92 632 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 CALML3P27482 149 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 PDE4AP27815 886 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 BEX3Q00994 111 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 FAAP100Q0VG06 881 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 SHHQ15465 462 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 TTC22Q5TAA0 569 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 RNF207Q6ZRF8 634 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 KIAA1211Q6ZU35 1233 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 TLK2Q86UE8 772 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 FBXO16Q8IX29 292 aaPredicted RBP17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 MPHOSPH6Q99547 160 aaKnown RBP17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 VTA1Q9NP79 307 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 PDGFCQ9NRA1 345 aa17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 DDX49Q9Y6V7 483 aaKnown RBP17.53■□□□□ 0.4
CCNDBP1-213ENST00000568507 ASTN1O14525 1302 aa17.52■□□□□ 0.4
CCNDBP1-213ENST00000568507 SMPD1P17405 629 aa17.52■□□□□ 0.39
CCNDBP1-213ENST00000568507 ITGB8P26012 769 aa17.52■□□□□ 0.39
CCNDBP1-213ENST00000568507 ALDH5A1P51649 535 aaPredicted RBP17.52■□□□□ 0.39
CCNDBP1-213ENST00000568507 TAPT1Q6NXT6 567 aa17.52■□□□□ 0.39
CCNDBP1-213ENST00000568507 RUFY2Q8WXA3 655 aa17.52■□□□□ 0.39
CCNDBP1-213ENST00000568507 ANKS1AQ92625 1134 aa17.52■□□□□ 0.39
CCNDBP1-213ENST00000568507 UBAC1Q9BSL1 405 aa17.52■□□□□ 0.39
CCNDBP1-213ENST00000568507 UBA5Q9GZZ9 404 aa17.52■□□□□ 0.39
CCNDBP1-213ENST00000568507 ZSWIM5Q9P217 1185 aa17.52■□□□□ 0.39
CCNDBP1-213ENST00000568507 GNEQ9Y223 722 aaKnown RBP17.52■□□□□ 0.39
CCNDBP1-213ENST00000568507 LOC102724159A0A0B4J2E5 919 aa17.51■□□□□ 0.39
CCNDBP1-213ENST00000568507 ARVCFO00192 962 aa17.51■□□□□ 0.39
CCNDBP1-213ENST00000568507 TLR3O15455 904 aaKnown RBP17.51■□□□□ 0.39
CCNDBP1-213ENST00000568507 CABYRO75952 493 aa17.51■□□□□ 0.39
CCNDBP1-213ENST00000568507 CDK7P50613 346 aa17.51■□□□□ 0.39
CCNDBP1-213ENST00000568507 NKX3-2P78367 333 aa17.51■□□□□ 0.39
CCNDBP1-213ENST00000568507 FPGSQ05932 587 aa17.51■□□□□ 0.39
CCNDBP1-213ENST00000568507 PWP2Q15269 919 aaKnown RBP17.51■□□□□ 0.39
CCNDBP1-213ENST00000568507 FSCN1Q16658 493 aaKnown RBP17.51■□□□□ 0.39
CCNDBP1-213ENST00000568507 C9orf50Q5SZB4 431 aa17.51■□□□□ 0.39
CCNDBP1-213ENST00000568507 MORC4Q8TE76 937 aa17.51■□□□□ 0.39
CCNDBP1-213ENST00000568507 CLEC4DQ8WXI8 215 aa17.51■□□□□ 0.39
CCNDBP1-213ENST00000568507 Q9Y3F1 56 aa17.51■□□□□ 0.39
CCNDBP1-213ENST00000568507 WDR19Q8NEZ3 1342 aa17.51■□□□□ 0.39
CCNDBP1-213ENST00000568507 B4DLN1 442 aa17.5■□□□□ 0.39
CCNDBP1-213ENST00000568507 CTAGE5O15320 804 aa17.5■□□□□ 0.39
CCNDBP1-213ENST00000568507 DHX16O60231 1041 aaKnown RBP17.5■□□□□ 0.39
CCNDBP1-213ENST00000568507 TNKSO95271 1327 aa17.5■□□□□ 0.39
CCNDBP1-213ENST00000568507 GSPT1P15170 499 aaKnown RBP17.5■□□□□ 0.39
CCNDBP1-213ENST00000568507 MRPL12P52815 198 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms