RNA–Protein interactions for RNA: ENST00000568413.1

RPAP1-211, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-211ENST00000568413 CCDC82Q8N4S0 544 aa10.3□□□□□ -0.76
RPAP1-211ENST00000568413 ZSCAN31Q96LW9 406 aaPredicted RBP10.3□□□□□ -0.76
RPAP1-211ENST00000568413 TRERF1Q96PN7 1200 aa10.3□□□□□ -0.76
RPAP1-211ENST00000568413 PIGSQ96S52 555 aa10.3□□□□□ -0.76
RPAP1-211ENST00000568413 AMNQ9BXJ7 453 aa10.3□□□□□ -0.76
RPAP1-211ENST00000568413 SLKQ9H2G2 1235 aaPredicted RBP10.3□□□□□ -0.76
RPAP1-211ENST00000568413 SEC63Q9UGP8 760 aaKnown RBP10.3□□□□□ -0.76
RPAP1-211ENST00000568413 TPCN1Q9ULQ1 816 aa10.3□□□□□ -0.76
RPAP1-211ENST00000568413 LIMCH1Q9UPQ0 1083 aa10.3□□□□□ -0.76
RPAP1-211ENST00000568413 RIPK3Q9Y572 518 aa10.3□□□□□ -0.76
RPAP1-211ENST00000568413 COL11A1P12107 1806 aaPredicted RBP10.3□□□□□ -0.76
RPAP1-211ENST00000568413 CPLX1O14810 134 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 PFKFB2O60825 505 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 IFNAR1P17181 557 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 MCM2P49736 904 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 AKAP17AQ02040 695 aaKnown RBP10.29□□□□□ -0.76
RPAP1-211ENST00000568413 STK3Q13188 491 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 SLC35G1Q2M3R5 365 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.29□□□□□ -0.76
RPAP1-211ENST00000568413 HOMER1Q86YM7 354 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 CMTR1Q8N1G2 835 aaKnown RBP10.29□□□□□ -0.76
RPAP1-211ENST00000568413 SHISA4Q96DD7 197 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 NUDT12Q9BQG2 462 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 MAF1Q9H063 256 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 ACAD9Q9H845 621 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 RNF146Q9NTX7 359 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 SLC5A4Q9NY91 659 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 RBM27Q9P2N5 1060 aaKnown RBP10.29□□□□□ -0.76
RPAP1-211ENST00000568413 SRRDQ9UH36 339 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 GJD2Q9UKL4 321 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 GABRQQ9UN88 632 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 MRPL11Q9Y3B7 192 aaKnown RBP10.29□□□□□ -0.76
RPAP1-211ENST00000568413 PCDHA1Q9Y5I3 950 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 A0A0G2JMZ2 1700 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 CEP290O15078 2479 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 ABCB11O95342 1321 aa10.29□□□□□ -0.76
RPAP1-211ENST00000568413 BAZ2BQ9UIF8 2168 aaKnown RBP10.28□□□□□ -0.76
RPAP1-211ENST00000568413 PRPF3O43395 683 aaKnown RBP10.28□□□□□ -0.76
RPAP1-211ENST00000568413 CDKL5O76039 1030 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 PRKCZQ05513 592 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 FUT2Q10981 343 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 KCTD2Q14681 263 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 NTRK3Q16288 839 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 ME3Q16798 604 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 USH1GQ495M9 461 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 MORN1Q5T089 497 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 NOL8Q76FK4 1167 aaKnown RBP10.28□□□□□ -0.76
RPAP1-211ENST00000568413 DPP9Q86TI2 863 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 ANKRD35Q8N283 1001 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 RGS22Q8NE09 1264 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 SOCS4Q8WXH5 440 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 PIBF1Q8WXW3 757 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 DDX11Q96FC9 970 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 MMP19Q99542 508 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 NCOA5Q9HCD5 579 aaKnown RBP10.28□□□□□ -0.76
RPAP1-211ENST00000568413 SH2B1Q9NRF2 756 aaPredicted RBP10.28□□□□□ -0.76
RPAP1-211ENST00000568413 HOMER2Q9NSB8 354 aa10.28□□□□□ -0.76
RPAP1-211ENST00000568413 V9GY48 417 aaPredicted RBP10.28□□□□□ -0.76
RPAP1-211ENST00000568413 XRCC5P13010 732 aaKnown RBP10.27□□□□□ -0.77
RPAP1-211ENST00000568413 ADORA2AP29274 412 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 GRK4P32298 578 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 RGS2P41220 211 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 FLT3LGP49771 235 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 SSRP1Q08945 709 aaKnown RBP10.27□□□□□ -0.77
RPAP1-211ENST00000568413 SCRN1Q12765 414 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 MAP2K5Q13163 448 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 IRF5Q13568 498 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 GRB14Q14449 540 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 MUM1L1Q5H9M0 696 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 HABP4Q5JVS0 413 aaKnown RBP10.27□□□□□ -0.77
RPAP1-211ENST00000568413 MCF2L2Q86YR7 1114 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 TRIM22Q8IYM9 498 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 SAMD3Q8N6K7 520 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 RAET1EQ8TD07 263 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 USP6NLQ92738 828 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 RNF26Q9BY78 433 aaPredicted RBP10.27□□□□□ -0.77
RPAP1-211ENST00000568413 PFASO15067 1338 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 CNTNAP5Q8WYK1 1306 aa10.27□□□□□ -0.77
RPAP1-211ENST00000568413 hCG_1984214I3L0E3 225 aa10.26□□□□□ -0.77
RPAP1-211ENST00000568413 PPP1R11O60927 126 aaPredicted RBP10.26□□□□□ -0.77
RPAP1-211ENST00000568413 HOXC6P09630 235 aa10.26□□□□□ -0.77
RPAP1-211ENST00000568413 CCL5P13501 91 aa10.26□□□□□ -0.77
RPAP1-211ENST00000568413 ELNP15502 786 aa10.26□□□□□ -0.77
RPAP1-211ENST00000568413 CYP2B6P20813 491 aa10.26□□□□□ -0.77
RPAP1-211ENST00000568413 NSMFQ6X4W1 530 aa10.26□□□□□ -0.77
RPAP1-211ENST00000568413 TRMT44Q8IYL2 757 aaKnown RBP10.26□□□□□ -0.77
RPAP1-211ENST00000568413 ZNF713Q8N859 430 aaPredicted RBP10.26□□□□□ -0.77
RPAP1-211ENST00000568413 NECAB1Q8N987 351 aa10.26□□□□□ -0.77
RPAP1-211ENST00000568413 CLEC4DQ8WXI8 215 aa10.26□□□□□ -0.77
RPAP1-211ENST00000568413 PHKBQ93100 1093 aa10.26□□□□□ -0.77
RPAP1-211ENST00000568413 GTF3C6Q969F1 213 aa10.26□□□□□ -0.77
RPAP1-211ENST00000568413 SLC26A6Q9BXS9 759 aa10.26□□□□□ -0.77
RPAP1-211ENST00000568413 MAP3K20Q9NYL2 800 aaKnown RBP10.26□□□□□ -0.77
RPAP1-211ENST00000568413 BIN2Q9UBW5 565 aaPredicted RBP10.26□□□□□ -0.77
RPAP1-211ENST00000568413 DIS3Q9Y2L1 958 aaKnown RBP10.26□□□□□ -0.77
RPAP1-211ENST00000568413 MYH6P13533 1939 aa10.26□□□□□ -0.77
RPAP1-211ENST00000568413 SMCHD1A6NHR9 2005 aa10.26□□□□□ -0.77
RPAP1-211ENST00000568413 TRIOBPQ9H2D6 2365 aa10.25□□□□□ -0.77
RPAP1-211ENST00000568413 ZNFX1Q9P2E3 1918 aaKnown RBP10.25□□□□□ -0.77
RPAP1-211ENST00000568413 hCG_1642624A0A1W2PR95 340 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms