RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 TDHQ8IZJ6 230 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 CHURC1Q8WUH1 139 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 PTCD2Q8WV60 388 aaKnown RBP5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 OSBP2Q969R2 916 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 UCN2Q96RP3 112 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 FLRT1Q9NZU1 646 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 FBXO40Q9UH90 709 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 NRBP1Q9UHY1 535 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 FEM1BQ9UK73 627 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 PPP1R9AQ9ULJ8 1098 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 ADAMTS5Q9UNA0 930 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 CNPY2Q9Y2B0 182 aa5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 DIS3Q9Y2L1 958 aaKnown RBP5.53□□□□□ -1.52
HERPUD1-213ENST00000568358 PFASO15067 1338 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 TSPY2A6NKD2 308 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 M0R2C6 588 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 PRDM1O75626 825 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 CHGBP05060 677 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 COL6A1P12109 1028 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 CYBAP13498 195 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 RASA1P20936 1047 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 RFX1P22670 979 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 MAGEA10P43363 369 aaPredicted RBP5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 TFAP4Q01664 338 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 PPARAQ07869 468 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 AAMPQ13685 434 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 LRRC26Q2I0M4 334 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 PRAMEF19Q5SWL8 479 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 ANO1Q5XXA6 986 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 TSHZ3Q63HK5 1081 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 SNRNP48Q6IEG0 339 aaKnown RBP5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 SLC39A5Q6ZMH5 540 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 CLEC10AQ8IUN9 316 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 CPXCR1Q8N123 301 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 ANKRD35Q8N283 1001 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 MSL3Q8N5Y2 521 aaKnown RBP5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 MKL1Q969V6 931 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 KIFC2Q96AC6 838 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 VTI1AQ96AJ9 217 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 EVI5LQ96CN4 794 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 MAML3Q96JK9 1138 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 GDF15Q99988 308 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 TINF2Q9BSI4 451 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 TEX13BQ9BXU2 312 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 PRO3102Q9H379 93 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 RWDD1Q9H446 243 aaPredicted RBP5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 SPC25Q9HBM1 224 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 TOMM22Q9NS69 142 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 FBXO28Q9NVF7 368 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 MTMR4Q9NYA4 1195 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 SYNPO2Q9UMS6 1093 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 ATP11BQ9Y2G3 1177 aa5.52□□□□□ -1.53
HERPUD1-213ENST00000568358 MCM3APO60318 1980 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 ZNF236Q9UL36 1845 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 TRIM6-TRIM34B2RNG4 842 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 TMEM232C9JQI7 657 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 ARHGAP33O14559 1287 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 RANBP6O60518 1105 aaKnown RBP5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 NDUFB10O96000 172 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 PGK2P07205 417 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 BMP3P12645 472 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 AKR1A1P14550 325 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 ADCYAP1R1P41586 468 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 SLC1A4P43007 532 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 STAT2P52630 851 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 OAZ1P54368 228 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 RRP1P56182 461 aaKnown RBP5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 RTP1P59025 263 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 ZNF792Q3KQV3 632 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 ZMYM1Q5SVZ6 1142 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 SLFN13Q68D06 897 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 NOL8Q76FK4 1167 aaKnown RBP5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 FAM160B2Q86V87 743 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 TICAM2Q86XR7 235 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 NPAS4Q8IUM7 802 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 PLPP6Q8IY26 295 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 DEFB123Q8N688 67 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 SLC17A8Q8NDX2 589 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 GMCL1P1Q8NEA9 526 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 TRPV1Q8NER1 839 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 CHST13Q8NET6 341 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 NEDD1Q8NHV4 660 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 NUP133Q8WUM0 1156 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 FERMT2Q96AC1 680 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 CEP95Q96GE4 821 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 NUP88Q99567 741 aaPredicted RBP5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 XPNPEP3Q9NQH7 507 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 PRDM5Q9NQX1 630 aaPredicted RBP5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 HELLSQ9NRZ9 838 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 FAM184BQ9ULE4 1060 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 STX8Q9UNK0 236 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 PCDHB15Q9Y5E8 787 aa5.51□□□□□ -1.53
HERPUD1-213ENST00000568358 SYNGAP1Q96PV0 1343 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 DCDC2CA8MYV0 355 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 SMIM22K7EJ46 135 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 ATP2A1O14983 1001 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 ZEB2O60315 1214 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 LILRB3O75022 631 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 MCCP23508 829 aa5.5□□□□□ -1.53
HERPUD1-213ENST00000568358 HDAC1Q13547 482 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms