RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 NECAB1Q8N987 351 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 OXER1Q8TDS5 423 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 ANKS1AQ92625 1134 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 KAT14Q9H8E8 782 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 SENP2Q9HC62 589 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 IL17RBQ9NRM6 502 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 MYH4Q9Y623 1939 aa9.99□□□□□ -0.81
KLHDC4-220ENST00000568338 IGKV6D-41A0A0C4DH26 115 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 CCDC196A0A1B0GTZ2 297 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 CYP2B6P20813 491 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 CCT2P78371 535 aaKnown RBP9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 SMAD3P84022 425 aaKnown RBP9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 PPP2R5BQ15173 497 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 ABCB5Q2M3G0 1257 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 TREML2Q5T2D2 321 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 RCSD1Q6JBY9 416 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 CPLX2Q6PUV4 134 aaKnown RBP9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 TMEM179Q6ZVK1 233 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 SOCS4Q8WXH5 440 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 CEP95Q96GE4 821 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 LLPHQ9BRT6 129 aaKnown RBP9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 SENP6Q9GZR1 1112 aaPredicted RBP9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 CABP5Q9NP86 173 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 MTMR4Q9NYA4 1195 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 GJD2Q9UKL4 321 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 STX8Q9UNK0 236 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 LHX6Q9UPM6 363 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 SMC3Q9UQE7 1217 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 DOCK1Q14185 1865 aa9.98□□□□□ -0.81
KLHDC4-220ENST00000568338 PHF20L1A8MW92 1017 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 CPLX1O14810 134 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 CDKL5O76039 1030 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 GDF11O95390 407 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 TTLL1O95922 423 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 TOP1P11387 765 aaKnown RBP9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 NOVP48745 357 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 HMGN5P82970 282 aaKnown RBP9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 MAP3K10Q02779 954 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 SHHQ15465 462 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 RTN1Q16799 776 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 ZNF687Q8N1G0 1237 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 PROCA1Q8NCQ7 364 aaPredicted RBP9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 PNMA1Q8ND90 353 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 NUP133Q8WUM0 1156 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 NUDT12Q9BQG2 462 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 MYL10Q9BUA6 226 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 TTYH1Q9H313 450 aaPredicted RBP9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 KANSL2Q9H9L4 492 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 NCOA5Q9HCD5 579 aaKnown RBP9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 RBM28Q9NW13 759 aaKnown RBP9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 KIF3AQ9Y496 699 aa9.97□□□□□ -0.81
KLHDC4-220ENST00000568338 PRUNE2Q8WUY3 3088 aa9.96□□□□□ -0.81
KLHDC4-220ENST00000568338 PTPDC1A2A3K4 754 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 CTNND1O60716 968 aaKnown RBP9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 GH2P01242 217 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 SLURP2P0DP57 97 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 XRCC5P13010 732 aaKnown RBP9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 RXRAP19793 462 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 GJB2P29033 226 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 KIF5BP33176 963 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 DDIT3P35638 169 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 ICA1Q05084 483 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 CACNB2Q08289 660 aaPredicted RBP9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 TROAPQ12815 778 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 RAB11FIP4Q86YS3 637 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 CCAR1Q8IX12 1150 aaKnown RBP9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 FANCBQ8NB91 859 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 NSUN7Q8NE18 718 aaKnown RBP9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 CTCFLQ8NI51 663 aaPredicted RBP9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 SMARCC2Q8TAQ2 1214 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 MAP3K14Q99558 947 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 TMEM47Q9BQJ4 181 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 GINM1Q9NU53 330 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 CHMP5Q9NZZ3 219 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 ZBTB21Q9ULJ3 1066 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 EYSQ5T1H1 3165 aa9.96□□□□□ -0.82
KLHDC4-220ENST00000568338 ASNSP08243 561 aa9.95□□□□□ -0.82
KLHDC4-220ENST00000568338 CCND3P30281 292 aaPredicted RBP9.95□□□□□ -0.82
KLHDC4-220ENST00000568338 CAP2P40123 477 aa9.95□□□□□ -0.82
KLHDC4-220ENST00000568338 SEPT2Q15019 361 aa9.95□□□□□ -0.82
KLHDC4-220ENST00000568338 C9orf50Q5SZB4 431 aa9.95□□□□□ -0.82
KLHDC4-220ENST00000568338 CCDC84Q86UT8 332 aaPredicted RBP9.95□□□□□ -0.82
KLHDC4-220ENST00000568338 CCDC144CPQ8IYA2 1237 aa9.95□□□□□ -0.82
KLHDC4-220ENST00000568338 PRDM5Q9NQX1 630 aaPredicted RBP9.95□□□□□ -0.82
KLHDC4-220ENST00000568338 NYAP2Q9P242 653 aa9.95□□□□□ -0.82
KLHDC4-220ENST00000568338 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.95□□□□□ -0.82
KLHDC4-220ENST00000568338 SYNPO2Q9UMS6 1093 aa9.95□□□□□ -0.82
KLHDC4-220ENST00000568338 ATP11BQ9Y2G3 1177 aa9.95□□□□□ -0.82
KLHDC4-220ENST00000568338 MYH6P13533 1939 aa9.95□□□□□ -0.82
KLHDC4-220ENST00000568338 STK36Q9NRP7 1315 aa9.94□□□□□ -0.82
KLHDC4-220ENST00000568338 JAK2O60674 1132 aa9.94□□□□□ -0.82
KLHDC4-220ENST00000568338 CTDNEP1O95476 244 aa9.94□□□□□ -0.82
KLHDC4-220ENST00000568338 PDIA4P13667 645 aaKnown RBP9.94□□□□□ -0.82
KLHDC4-220ENST00000568338 IFNAR1P17181 557 aa9.94□□□□□ -0.82
KLHDC4-220ENST00000568338 PDCP20941 246 aa9.94□□□□□ -0.82
KLHDC4-220ENST00000568338 CDC27P30260 824 aa9.94□□□□□ -0.82
KLHDC4-220ENST00000568338 GUCY1A2P33402 732 aa9.94□□□□□ -0.82
KLHDC4-220ENST00000568338 ADD1P35611 737 aaKnown RBP9.94□□□□□ -0.82
KLHDC4-220ENST00000568338 RGS2P41220 211 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms