RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 ATP2B2Q01814 1243 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 TAGLNQ01995 201 aaKnown RBP7.36□□□□□ -1.23
CAPN3-218ENST00000568153 GRM2Q14416 872 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 RABEP1Q15276 862 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 ALG1LQ6GMV1 187 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 DDX46Q7L014 1031 aaKnown RBP7.36□□□□□ -1.23
CAPN3-218ENST00000568153 CCNJLQ8IV13 435 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 NLGN1Q8N2Q7 840 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 DTWD1Q8N5C7 304 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 VGLL2Q8N8G2 317 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 KBTBD3Q8NAB2 608 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 ASAP3Q8TDY4 903 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 FBF1Q8TES7 1133 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 KIF2CQ99661 725 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 ADAM19Q9H013 955 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 SH2B1Q9NRF2 756 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-218ENST00000568153 PAG1Q9NWQ8 432 aa7.36□□□□□ -1.23
CAPN3-218ENST00000568153 N4BP2Q86UW6 1770 aaPredicted RBP7.36□□□□□ -1.23
CAPN3-218ENST00000568153 GOLIM4O00461 696 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 RNF113AO15541 343 aaKnown RBP7.35□□□□□ -1.23
CAPN3-218ENST00000568153 TAF5LO75529 589 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 SERPINB2P05120 415 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 EPHA1P21709 976 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 ADORA1P30542 326 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 GRIA4P48058 902 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 ANAPC15P60006 121 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 CHRNDQ07001 517 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 NMIQ13287 307 aaPredicted RBP7.35□□□□□ -1.23
CAPN3-218ENST00000568153 MCMDC2Q4G0Z9 681 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 HSCBQ8IWL3 235 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 CACTIN-AS1Q8N1I8 211 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 GLIS3Q8NEA6 775 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 EDC3Q96F86 508 aaKnown RBP7.35□□□□□ -1.23
CAPN3-218ENST00000568153 ANKRD2Q9GZV1 360 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 HELLSQ9NRZ9 838 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 RNF19AQ9NV58 838 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 MINPP1Q9UNW1 487 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 ARFGEF2Q9Y6D5 1785 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 TJP1Q07157 1748 aa7.35□□□□□ -1.23
CAPN3-218ENST00000568153 PRPF40AO75400 957 aaKnown RBP7.34□□□□□ -1.23
CAPN3-218ENST00000568153 ZFYP08048 801 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-218ENST00000568153 CDC27P30260 824 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 CDC25BP30305 580 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 HSPA4P34932 840 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 ST5P78524 1137 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 UBE4AQ14139 1066 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 TTF1Q15361 905 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-218ENST00000568153 SPRED3Q2MJR0 410 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 ZSCAN25Q6NSZ9 544 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 TXNDC11Q6PKC3 985 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 COL23A1Q86Y22 540 aaPredicted RBP7.34□□□□□ -1.23
CAPN3-218ENST00000568153 CNBD1Q8NA66 436 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 BSNDQ8WZ55 320 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 MAP4K1Q92918 833 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 RBM17Q96I25 401 aaKnown RBP7.34□□□□□ -1.23
CAPN3-218ENST00000568153 FAM227BQ96M60 508 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 NACC1Q96RE7 527 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 BCO2Q9BYV7 579 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 LSG1Q9H089 658 aaKnown RBP7.34□□□□□ -1.23
CAPN3-218ENST00000568153 MUC3BQ9H195 1237 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 ABCB6Q9NP58 842 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 GNL3LQ9NVN8 582 aaKnown RBP7.34□□□□□ -1.23
CAPN3-218ENST00000568153 SOX13Q9UN79 622 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 PPME1Q9Y570 386 aa7.34□□□□□ -1.23
CAPN3-218ENST00000568153 CARMIL3Q8ND23 1372 aa7.33□□□□□ -1.24
CAPN3-218ENST00000568153 RAD50Q92878 1312 aa7.33□□□□□ -1.24
CAPN3-218ENST00000568153 ZNF831Q5JPB2 1677 aa7.33□□□□□ -1.24
CAPN3-218ENST00000568153 LINC01387J3KSC0 135 aa7.33□□□□□ -1.24
CAPN3-218ENST00000568153 DEAF1O75398 565 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-218ENST00000568153 BBOX1O75936 387 aa7.33□□□□□ -1.24
CAPN3-218ENST00000568153 KCNJ4P48050 445 aa7.33□□□□□ -1.24
CAPN3-218ENST00000568153 NEK4P51957 841 aa7.33□□□□□ -1.24
CAPN3-218ENST00000568153 PTH1RQ03431 593 aa7.33□□□□□ -1.24
CAPN3-218ENST00000568153 CAVIN4Q5BKX8 364 aa7.33□□□□□ -1.24
CAPN3-218ENST00000568153 PRPF40BQ6NWY9 871 aaKnown RBP7.33□□□□□ -1.24
CAPN3-218ENST00000568153 NXPE4Q6UWF7 544 aa7.33□□□□□ -1.24
CAPN3-218ENST00000568153 SHISA2Q6UWI4 295 aa7.33□□□□□ -1.24
CAPN3-218ENST00000568153 VN1R5Q7Z5H4 357 aa7.33□□□□□ -1.24
CAPN3-218ENST00000568153 FBXO11Q86XK2 927 aa7.33□□□□□ -1.24
CAPN3-218ENST00000568153 CELF1Q92879 486 aaKnown RBP7.33□□□□□ -1.24
CAPN3-218ENST00000568153 LENG1Q96BZ8 264 aaPredicted RBP7.33□□□□□ -1.24
CAPN3-218ENST00000568153 IL17RAQ96F46 866 aa7.33□□□□□ -1.24
CAPN3-218ENST00000568153 CAMKK2Q96RR4 588 aa7.33□□□□□ -1.24
CAPN3-218ENST00000568153 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.33□□□□□ -1.24
CAPN3-218ENST00000568153 NUP188Q5SRE5 1749 aa7.32□□□□□ -1.24
CAPN3-218ENST00000568153 NHSQ6T4R5 1651 aa7.32□□□□□ -1.24
CAPN3-218ENST00000568153 A0A096LPE4 126 aa7.32□□□□□ -1.24
CAPN3-218ENST00000568153 A0A1W2PPZ6 126 aa7.32□□□□□ -1.24
CAPN3-218ENST00000568153 POLRMTO00411 1230 aaKnown RBP7.32□□□□□ -1.24
CAPN3-218ENST00000568153 ZKSCAN1P17029 563 aaPredicted RBP7.32□□□□□ -1.24
CAPN3-218ENST00000568153 GATA4P43694 442 aa7.32□□□□□ -1.24
CAPN3-218ENST00000568153 PHKA1P46020 1223 aa7.32□□□□□ -1.24
CAPN3-218ENST00000568153 MCM2P49736 904 aa7.32□□□□□ -1.24
CAPN3-218ENST00000568153 GRAPQ13588 217 aa7.32□□□□□ -1.24
CAPN3-218ENST00000568153 ADGRE1Q14246 886 aa7.32□□□□□ -1.24
CAPN3-218ENST00000568153 SUZ12Q15022 739 aaKnown RBP7.32□□□□□ -1.24
CAPN3-218ENST00000568153 SETDB1Q15047 1291 aa7.32□□□□□ -1.24
CAPN3-218ENST00000568153 NECTIN1Q15223 517 aa7.32□□□□□ -1.24
CAPN3-218ENST00000568153 ZNF827Q17R98 1081 aa7.32□□□□□ -1.24
CAPN3-218ENST00000568153 ZMYM1Q5SVZ6 1142 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms