RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 OPLAHO14841 1288 aa20.82■□□□□ 0.92
COMMD4-222ENST00000568034 PRPF3O43395 683 aaKnown RBP20.82■□□□□ 0.92
COMMD4-222ENST00000568034 FMNL1O95466 1100 aaPredicted RBP20.82■□□□□ 0.92
COMMD4-222ENST00000568034 PTPREP23469 700 aa20.82■□□□□ 0.92
COMMD4-222ENST00000568034 MCM2P49736 904 aa20.82■□□□□ 0.92
COMMD4-222ENST00000568034 KIF22Q14807 665 aa20.82■□□□□ 0.92
COMMD4-222ENST00000568034 MORN1Q5T089 497 aa20.82■□□□□ 0.92
COMMD4-222ENST00000568034 OTOP1Q7RTM1 612 aa20.82■□□□□ 0.92
COMMD4-222ENST00000568034 USP6NLQ92738 828 aa20.82■□□□□ 0.92
COMMD4-222ENST00000568034 TMX3Q96JJ7 454 aa20.82■□□□□ 0.92
COMMD4-222ENST00000568034 ACAD9Q9H845 621 aa20.82■□□□□ 0.92
COMMD4-222ENST00000568034 PRDM10Q9NQV6 1147 aa20.82■□□□□ 0.92
COMMD4-222ENST00000568034 SH2B1Q9NRF2 756 aaPredicted RBP20.82■□□□□ 0.92
COMMD4-222ENST00000568034 GABRQQ9UN88 632 aa20.82■□□□□ 0.92
COMMD4-222ENST00000568034 ABCB11O95342 1321 aa20.81■□□□□ 0.92
COMMD4-222ENST00000568034 CPLX1O14810 134 aa20.81■□□□□ 0.92
COMMD4-222ENST00000568034 WDR78Q5VTH9 848 aa20.81■□□□□ 0.92
COMMD4-222ENST00000568034 WWC2Q6AWC2 1192 aa20.81■□□□□ 0.92
COMMD4-222ENST00000568034 TYW1BQ6NUM6 668 aa20.81■□□□□ 0.92
COMMD4-222ENST00000568034 CCDC83Q8IWF9 413 aa20.81■□□□□ 0.92
COMMD4-222ENST00000568034 CCAR1Q8IX12 1150 aaKnown RBP20.81■□□□□ 0.92
COMMD4-222ENST00000568034 NSUN7Q8NE18 718 aaKnown RBP20.81■□□□□ 0.92
COMMD4-222ENST00000568034 COA7Q96BR5 231 aa20.81■□□□□ 0.92
COMMD4-222ENST00000568034 SLC26A6Q9BXS9 759 aa20.81■□□□□ 0.92
COMMD4-222ENST00000568034 SEC63Q9UGP8 760 aaKnown RBP20.81■□□□□ 0.92
COMMD4-222ENST00000568034 PCDHA1Q9Y5I3 950 aa20.81■□□□□ 0.92
COMMD4-222ENST00000568034 RBBP6Q7Z6E9 1792 aaKnown RBP20.8■□□□□ 0.92
COMMD4-222ENST00000568034 PRKCZQ05513 592 aa20.8■□□□□ 0.92
COMMD4-222ENST00000568034 PFKFB3Q16875 520 aaPredicted RBP20.8■□□□□ 0.92
COMMD4-222ENST00000568034 ABRAQ8N0Z2 381 aa20.8■□□□□ 0.92
COMMD4-222ENST00000568034 GPKOWQ92917 476 aaPredicted RBP eCLIP20.8■□□□□ 0.92
COMMD4-222ENST00000568034 SHISA4Q96DD7 197 aa20.8■□□□□ 0.92
COMMD4-222ENST00000568034 A1CFQ9NQ94 594 aaKnown RBP20.8■□□□□ 0.92
COMMD4-222ENST00000568034 SRRDQ9UH36 339 aa20.8■□□□□ 0.92
COMMD4-222ENST00000568034 FBXO40Q9UH90 709 aa20.8■□□□□ 0.92
COMMD4-222ENST00000568034 LCTP09848 1927 aa20.8■□□□□ 0.92
COMMD4-222ENST00000568034 STK36Q9NRP7 1315 aa20.79■□□□□ 0.92
COMMD4-222ENST00000568034 SLC15A5A6NIM6 579 aa20.79■□□□□ 0.92
COMMD4-222ENST00000568034 JAK2O60674 1132 aa20.79■□□□□ 0.92
COMMD4-222ENST00000568034 GNRH1P01148 92 aa20.79■□□□□ 0.92
COMMD4-222ENST00000568034 SCG2P13521 617 aa20.79■□□□□ 0.92
COMMD4-222ENST00000568034 ADORA2AP29274 412 aa20.79■□□□□ 0.92
COMMD4-222ENST00000568034 CPLX2Q6PUV4 134 aaKnown RBP20.79■□□□□ 0.92
COMMD4-222ENST00000568034 SNX21Q969T3 373 aa20.79■□□□□ 0.92
COMMD4-222ENST00000568034 MMP19Q99542 508 aa20.79■□□□□ 0.92
COMMD4-222ENST00000568034 RBM27Q9P2N5 1060 aaKnown RBP20.79■□□□□ 0.92
COMMD4-222ENST00000568034 TRIM17Q9Y577 477 aa20.79■□□□□ 0.92
COMMD4-222ENST00000568034 DNAJC25-GNG10A0A024R161 153 aa20.78■□□□□ 0.92
COMMD4-222ENST00000568034 PTPDC1A2A3K4 754 aa20.78■□□□□ 0.92
COMMD4-222ENST00000568034 STXBP3O00186 592 aa20.78■□□□□ 0.92
COMMD4-222ENST00000568034 STRNO43815 780 aa20.78■□□□□ 0.92
COMMD4-222ENST00000568034 COBLO75128 1261 aa20.78■□□□□ 0.92
COMMD4-222ENST00000568034 CDKL5O76039 1030 aa20.78■□□□□ 0.92
COMMD4-222ENST00000568034 FCER1AP12319 257 aa20.78■□□□□ 0.92
COMMD4-222ENST00000568034 FDPSP14324 419 aaKnown RBP20.78■□□□□ 0.92
COMMD4-222ENST00000568034 GHRHRQ02643 423 aa20.78■□□□□ 0.92
COMMD4-222ENST00000568034 SSRP1Q08945 709 aaKnown RBP20.78■□□□□ 0.92
COMMD4-222ENST00000568034 HEATR3Q7Z4Q2 680 aa20.78■□□□□ 0.92
COMMD4-222ENST00000568034 SMARCC2Q8TAQ2 1214 aa20.78■□□□□ 0.92
COMMD4-222ENST00000568034 SOCS4Q8WXH5 440 aa20.78■□□□□ 0.92
COMMD4-222ENST00000568034 TBC1D5Q92609 795 aa20.78■□□□□ 0.92
COMMD4-222ENST00000568034 CYP39A1Q9NYL5 469 aa20.78■□□□□ 0.92
COMMD4-222ENST00000568034 MRPL11Q9Y3B7 192 aaKnown RBP20.78■□□□□ 0.92
COMMD4-222ENST00000568034 IVNS1ABPQ9Y6Y0 642 aa20.78■□□□□ 0.92
COMMD4-222ENST00000568034 ZNFX1Q9P2E3 1918 aaKnown RBP20.78■□□□□ 0.92
COMMD4-222ENST00000568034 FLT3LGP49771 235 aa20.77■□□□□ 0.92
COMMD4-222ENST00000568034 MAP2K5Q13163 448 aa20.77■□□□□ 0.92
COMMD4-222ENST00000568034 KCTD2Q14681 263 aa20.77■□□□□ 0.92
COMMD4-222ENST00000568034 SLC30A10Q6XR72 485 aa20.77■□□□□ 0.92
COMMD4-222ENST00000568034 CTU1Q7Z7A3 348 aaKnown RBP20.77■□□□□ 0.92
COMMD4-222ENST00000568034 TRIM22Q8IYM9 498 aa20.77■□□□□ 0.92
COMMD4-222ENST00000568034 FGD4Q96M96 766 aa20.77■□□□□ 0.92
COMMD4-222ENST00000568034 NUDT12Q9BQG2 462 aa20.77■□□□□ 0.92
COMMD4-222ENST00000568034 CWC22Q9HCG8 908 aaKnown RBP20.77■□□□□ 0.92
COMMD4-222ENST00000568034 BARHL2Q9NY43 387 aa20.77■□□□□ 0.92
COMMD4-222ENST00000568034 hCG_1984214I3L0E3 225 aa20.76■□□□□ 0.91
COMMD4-222ENST00000568034 DEXIO95424 95 aa20.76■□□□□ 0.91
COMMD4-222ENST00000568034 PGK2P07205 417 aa20.76■□□□□ 0.91
COMMD4-222ENST00000568034 HOXC6P09630 235 aa20.76■□□□□ 0.91
COMMD4-222ENST00000568034 TRAF1Q13077 416 aa20.76■□□□□ 0.91
COMMD4-222ENST00000568034 ARHGEF6Q15052 776 aa20.76■□□□□ 0.91
COMMD4-222ENST00000568034 ANKRD35Q8N283 1001 aa20.76■□□□□ 0.91
COMMD4-222ENST00000568034 ZNF713Q8N859 430 aaPredicted RBP20.76■□□□□ 0.91
COMMD4-222ENST00000568034 RGS22Q8NE09 1264 aa20.76■□□□□ 0.91
COMMD4-222ENST00000568034 NPLOC4Q8TAT6 608 aa20.76■□□□□ 0.91
COMMD4-222ENST00000568034 AIFM3Q96NN9 605 aa20.76■□□□□ 0.91
COMMD4-222ENST00000568034 HOXD10P28358 340 aa20.75■□□□□ 0.91
COMMD4-222ENST00000568034 PRMT2P55345 433 aa20.75■□□□□ 0.91
COMMD4-222ENST00000568034 RPS6P62753 249 aaKnown RBP20.75■□□□□ 0.91
COMMD4-222ENST00000568034 AKAP17AQ02040 695 aaKnown RBP20.75■□□□□ 0.91
COMMD4-222ENST00000568034 IRF5Q13568 498 aa20.75■□□□□ 0.91
COMMD4-222ENST00000568034 CUL4AQ13619 759 aa20.75■□□□□ 0.91
COMMD4-222ENST00000568034 BAATQ14032 418 aaPredicted RBP20.75■□□□□ 0.91
COMMD4-222ENST00000568034 ZNF792Q3KQV3 632 aa20.75■□□□□ 0.91
COMMD4-222ENST00000568034 PPP1R18Q6NYC8 613 aa20.75■□□□□ 0.91
COMMD4-222ENST00000568034 NSMFQ6X4W1 530 aa20.75■□□□□ 0.91
COMMD4-222ENST00000568034 FAM133AQ8N9E0 248 aa20.75■□□□□ 0.91
COMMD4-222ENST00000568034 LLPHQ9BRT6 129 aaKnown RBP20.75■□□□□ 0.91
COMMD4-222ENST00000568034 ORC3Q9UBD5 711 aaPredicted RBP20.75■□□□□ 0.91
COMMD4-222ENST00000568034 ASTN1O14525 1302 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms