RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 SH2B2O14492 632 aaPredicted RBP12.88□□□□□ -0.35
LINC01228-201ENST00000567966 PDHBP11177 359 aa12.88□□□□□ -0.35
LINC01228-201ENST00000567966 RPS6KB1P23443 525 aa12.88□□□□□ -0.35
LINC01228-201ENST00000567966 SMARCA1P28370 1054 aa12.88□□□□□ -0.35
LINC01228-201ENST00000567966 RBM25P49756 843 aaKnown RBP12.88□□□□□ -0.35
LINC01228-201ENST00000567966 TROAPQ12815 778 aa12.88□□□□□ -0.35
LINC01228-201ENST00000567966 ASPRV1Q53RT3 343 aa12.88□□□□□ -0.35
LINC01228-201ENST00000567966 OLFML2BQ68BL8 750 aa12.88□□□□□ -0.35
LINC01228-201ENST00000567966 SYNE3Q6ZMZ3 975 aa12.88□□□□□ -0.35
LINC01228-201ENST00000567966 RIOX2Q8IUF8 465 aa12.88□□□□□ -0.35
LINC01228-201ENST00000567966 MAML3Q96JK9 1138 aa12.88□□□□□ -0.35
LINC01228-201ENST00000567966 SLF1Q9BQI6 1058 aa12.88□□□□□ -0.35
LINC01228-201ENST00000567966 AGXT2Q9BYV1 514 aa12.88□□□□□ -0.35
LINC01228-201ENST00000567966 LY9Q9HBG7 655 aa12.88□□□□□ -0.35
LINC01228-201ENST00000567966 ZNF214Q9UL59 606 aaPredicted RBP12.88□□□□□ -0.35
LINC01228-201ENST00000567966 CEP290O15078 2479 aa12.88□□□□□ -0.35
LINC01228-201ENST00000567966 CCDC69A6NI79 296 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 ATP2A1O14983 1001 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 ZBED4O75132 1171 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 DDAH1O94760 285 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 SLC25A27O95847 323 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 PGK2P07205 417 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 FCER1AP12319 257 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 CASTP20810 708 aaKnown RBP12.87□□□□□ -0.35
LINC01228-201ENST00000567966 KIF5BP33176 963 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 STAT3P40763 770 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 MAGEA10P43363 369 aaPredicted RBP12.87□□□□□ -0.35
LINC01228-201ENST00000567966 GNAQP50148 359 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 STAT2P52630 851 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 OAZ1P54368 228 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 EVCP57679 992 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 FGD1P98174 961 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 ZNF543Q08ER8 600 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 GJC2Q5T442 439 aaPredicted RBP12.87□□□□□ -0.35
LINC01228-201ENST00000567966 CHST3Q7LGC8 479 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 ABRAQ8N0Z2 381 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 MMP19Q99542 508 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 LZTS2Q9BRK4 669 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 C22orf23Q9BZE7 217 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 SENP6Q9GZR1 1112 aaPredicted RBP12.87□□□□□ -0.35
LINC01228-201ENST00000567966 RIPK3Q9Y572 518 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 SLC12A7Q9Y666 1083 aa12.87□□□□□ -0.35
LINC01228-201ENST00000567966 TRIOBPQ9H2D6 2365 aa12.86□□□□□ -0.35
LINC01228-201ENST00000567966 PALM3A6NDB9 673 aaPredicted RBP12.86□□□□□ -0.35
LINC01228-201ENST00000567966 TMEM232C9JQI7 657 aa12.86□□□□□ -0.35
LINC01228-201ENST00000567966 PARP1P09874 1014 aaKnown RBP12.86□□□□□ -0.35
LINC01228-201ENST00000567966 COPB2P35606 906 aa12.86□□□□□ -0.35
LINC01228-201ENST00000567966 ATN1P54259 1190 aaPredicted RBP12.86□□□□□ -0.35
LINC01228-201ENST00000567966 ANKRD1Q15327 319 aa12.86□□□□□ -0.35
LINC01228-201ENST00000567966 NFXL1Q6ZNB6 911 aa12.86□□□□□ -0.35
LINC01228-201ENST00000567966 CHMP4CQ96CF2 233 aa12.86□□□□□ -0.35
LINC01228-201ENST00000567966 LRCH3Q96II8 777 aa12.86□□□□□ -0.35
LINC01228-201ENST00000567966 DNAH12Q6ZR08 3092 aa12.86□□□□□ -0.35
LINC01228-201ENST00000567966 SMCHD1A6NHR9 2005 aa12.86□□□□□ -0.35
LINC01228-201ENST00000567966 RANBP2P49792 3224 aaKnown RBP12.86□□□□□ -0.35
LINC01228-201ENST00000567966 CCDC196A0A1B0GTZ2 297 aa12.85□□□□□ -0.35
LINC01228-201ENST00000567966 SEPT4O43236 478 aa12.85□□□□□ -0.35
LINC01228-201ENST00000567966 MSCO60682 206 aa12.85□□□□□ -0.35
LINC01228-201ENST00000567966 TAL1P17542 331 aaPredicted RBP12.85□□□□□ -0.35
LINC01228-201ENST00000567966 BMP8BP34820 402 aa12.85□□□□□ -0.35
LINC01228-201ENST00000567966 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
LINC01228-201ENST00000567966 TRAF1Q13077 416 aa12.85□□□□□ -0.35
LINC01228-201ENST00000567966 ZNF792Q3KQV3 632 aa12.85□□□□□ -0.35
LINC01228-201ENST00000567966 ZNF654Q8IZM8 581 aa12.85□□□□□ -0.35
LINC01228-201ENST00000567966 FANCBQ8NB91 859 aa12.85□□□□□ -0.35
LINC01228-201ENST00000567966 SLC38A10Q9HBR0 1119 aa12.85□□□□□ -0.35
LINC01228-201ENST00000567966 PDRG1Q9NUG6 133 aa12.85□□□□□ -0.35
LINC01228-201ENST00000567966 A0A1W2PPC1 479 aa12.84□□□□□ -0.35
LINC01228-201ENST00000567966 DNM1LO00429 736 aa12.84□□□□□ -0.35
LINC01228-201ENST00000567966 BECN1Q14457 450 aa12.84□□□□□ -0.35
LINC01228-201ENST00000567966 GRM4Q14833 912 aa12.84□□□□□ -0.35
LINC01228-201ENST00000567966 CCDC96Q2M329 555 aa12.84□□□□□ -0.35
LINC01228-201ENST00000567966 SNRNP48Q6IEG0 339 aaKnown RBP12.84□□□□□ -0.35
LINC01228-201ENST00000567966 Q6ZUG5 572 aa12.84□□□□□ -0.35
LINC01228-201ENST00000567966 KCTD1Q719H9 257 aa12.84□□□□□ -0.35
LINC01228-201ENST00000567966 CPXCR1Q8N123 301 aa12.84□□□□□ -0.35
LINC01228-201ENST00000567966 CTCFLQ8NI51 663 aaPredicted RBP12.84□□□□□ -0.35
LINC01228-201ENST00000567966 KIFC2Q96AC6 838 aa12.84□□□□□ -0.35
LINC01228-201ENST00000567966 ZNF274Q96GC6 653 aaPredicted RBP12.84□□□□□ -0.35
LINC01228-201ENST00000567966 MAF1Q9H063 256 aa12.84□□□□□ -0.35
LINC01228-201ENST00000567966 RAVER2Q9HCJ3 691 aaKnown RBP12.84□□□□□ -0.35
LINC01228-201ENST00000567966 SLC5A4Q9NY91 659 aa12.84□□□□□ -0.35
LINC01228-201ENST00000567966 CTDP1Q9Y5B0 961 aaPredicted RBP12.84□□□□□ -0.35
LINC01228-201ENST00000567966 KLRF2D3W0D1 207 aa12.83□□□□□ -0.36
LINC01228-201ENST00000567966 RTP1P59025 263 aa12.83□□□□□ -0.36
LINC01228-201ENST00000567966 MDM2Q00987 491 aaPredicted RBP12.83□□□□□ -0.36
LINC01228-201ENST00000567966 IKQ13123 557 aaPredicted RBP12.83□□□□□ -0.36
LINC01228-201ENST00000567966 KCTD2Q14681 263 aa12.83□□□□□ -0.36
LINC01228-201ENST00000567966 LRRC41Q15345 812 aa12.83□□□□□ -0.36
LINC01228-201ENST00000567966 TKFCQ3LXA3 575 aa12.83□□□□□ -0.36
LINC01228-201ENST00000567966 SYDE2Q5VT97 1194 aa12.83□□□□□ -0.36
LINC01228-201ENST00000567966 APOA5Q6Q788 366 aa12.83□□□□□ -0.36
LINC01228-201ENST00000567966 RASGRP2Q7LDG7 609 aa12.83□□□□□ -0.36
LINC01228-201ENST00000567966 TINF2Q9BSI4 451 aa12.83□□□□□ -0.36
LINC01228-201ENST00000567966 TEX13BQ9BXU2 312 aa12.83□□□□□ -0.36
LINC01228-201ENST00000567966 SENP2Q9HC62 589 aa12.83□□□□□ -0.36
LINC01228-201ENST00000567966 GPCPD1Q9NPB8 672 aa12.83□□□□□ -0.36
LINC01228-201ENST00000567966 GPHNQ9NQX3 736 aaPredicted RBP12.83□□□□□ -0.36
LINC01228-201ENST00000567966 RBM28Q9NW13 759 aaKnown RBP12.83□□□□□ -0.36
LINC01228-201ENST00000567966 MAD2L2Q9UI95 211 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms