RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 TOB1P50616 345 aaPredicted RBP16.69■□□□□ 0.26
COMMD4-221ENST00000567935 CACNB3P54284 484 aa16.69■□□□□ 0.26
COMMD4-221ENST00000567935 ZNF543Q08ER8 600 aa16.69■□□□□ 0.26
COMMD4-221ENST00000567935 SNW1Q13573 536 aaKnown RBP16.69■□□□□ 0.26
COMMD4-221ENST00000567935 TPRNQ4KMQ1 711 aa16.69■□□□□ 0.26
COMMD4-221ENST00000567935 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.69■□□□□ 0.26
COMMD4-221ENST00000567935 BLIDQ8IZY5 108 aa16.69■□□□□ 0.26
COMMD4-221ENST00000567935 OXER1Q8TDS5 423 aa16.69■□□□□ 0.26
COMMD4-221ENST00000567935 CABP5Q9NP86 173 aa16.69■□□□□ 0.26
COMMD4-221ENST00000567935 hCG_1642624A0A1W2PR95 340 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 STXBP3O00186 592 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 GNA11P29992 359 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 GJA8P48165 433 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 TNNI2P48788 182 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 CCDC173Q0VFZ6 552 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 ABCB5Q2M3G0 1257 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 GPR153Q6NV75 609 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 PPP1R18Q6NYC8 613 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 USP17L2Q6R6M4 530 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 SASS6Q6UVJ0 657 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 BRI3BPQ8WY22 251 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 FERMT2Q96AC1 680 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 MS4A4AQ96JQ5 239 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 GOLPH3LQ9H4A5 285 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 ZFYVE28Q9HCC9 887 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 MTMR10Q9NXD2 777 aa16.68■□□□□ 0.26
COMMD4-221ENST00000567935 USP17L5A8MUK1 530 aa16.67■□□□□ 0.26
COMMD4-221ENST00000567935 TNFAIP1Q13829 316 aa16.67■□□□□ 0.26
COMMD4-221ENST00000567935 RESP18Q5W5W9 173 aa16.67■□□□□ 0.26
COMMD4-221ENST00000567935 WWC2Q6AWC2 1192 aa16.67■□□□□ 0.26
COMMD4-221ENST00000567935 HEATR3Q7Z4Q2 680 aa16.67■□□□□ 0.26
COMMD4-221ENST00000567935 ELOA2Q8IYF1 753 aaPredicted RBP16.67■□□□□ 0.26
COMMD4-221ENST00000567935 LRRC47Q8N1G4 583 aaKnown RBP16.67■□□□□ 0.26
COMMD4-221ENST00000567935 ZMYND12Q9H0C1 365 aa16.67■□□□□ 0.26
COMMD4-221ENST00000567935 C6orf50Q9HD87 102 aa16.67■□□□□ 0.26
COMMD4-221ENST00000567935 PRDM6Q9NQX0 595 aa16.67■□□□□ 0.26
COMMD4-221ENST00000567935 FAM13BQ9NYF5 915 aa16.67■□□□□ 0.26
COMMD4-221ENST00000567935 HPSEQ9Y251 543 aa16.67■□□□□ 0.26
COMMD4-221ENST00000567935 SRPRBQ9Y5M8 271 aaKnown RBP16.67■□□□□ 0.26
COMMD4-221ENST00000567935 SPTBN5Q9NRC6 3674 aaKnown RBP16.66■□□□□ 0.26
COMMD4-221ENST00000567935 UNCXA6NJT0 531 aa16.66■□□□□ 0.26
COMMD4-221ENST00000567935 USP2O75604 605 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-221ENST00000567935 ECM2O94769 699 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-221ENST00000567935 MARCKSP29966 332 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-221ENST00000567935 ICA1Q05084 483 aa16.66■□□□□ 0.26
COMMD4-221ENST00000567935 TYRO3Q06418 890 aa16.66■□□□□ 0.26
COMMD4-221ENST00000567935 ORC2Q13416 577 aaPredicted RBP16.66■□□□□ 0.26
COMMD4-221ENST00000567935 SLC35G1Q2M3R5 365 aa16.66■□□□□ 0.26
COMMD4-221ENST00000567935 TTC38Q5R3I4 469 aa16.66■□□□□ 0.26
COMMD4-221ENST00000567935 KRT25Q7Z3Z0 450 aa16.66■□□□□ 0.26
COMMD4-221ENST00000567935 FAM43AQ8N2R8 423 aa16.66■□□□□ 0.26
COMMD4-221ENST00000567935 GMCL1P1Q8NEA9 526 aa16.66■□□□□ 0.26
COMMD4-221ENST00000567935 OPTNQ96CV9 577 aa16.66■□□□□ 0.26
COMMD4-221ENST00000567935 ELP3Q9H9T3 547 aa16.66■□□□□ 0.26
COMMD4-221ENST00000567935 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.66■□□□□ 0.26
COMMD4-221ENST00000567935 OTOFQ9HC10 1997 aa16.66■□□□□ 0.26
COMMD4-221ENST00000567935 CCDC194A0A1B0GVG4 234 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 A0A1B0GVL5 298 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 TCP10L2B9ZVM9 353 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 M0R2N6 131 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 FARP2O94887 1054 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-221ENST00000567935 GOLGA8HP0CJ92 632 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 PFKFB1P16118 471 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 SYKP43405 635 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 IREB2P48200 963 aaKnown RBP16.65■□□□□ 0.26
COMMD4-221ENST00000567935 NDUFA8P51970 172 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 NAPAP54920 295 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 LACTBP83111 547 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-221ENST00000567935 CAMK4Q16566 473 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 NBPF12Q5TAG4 269 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-221ENST00000567935 CNKSR2Q8WXI2 1034 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 CCDC34Q96HJ3 373 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 GMCL1Q96IK5 515 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 PPP1R9BQ96SB3 815 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 SDF4Q9BRK5 362 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 GLT8D2Q9H1C3 349 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 GINM1Q9NU53 330 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 HOOK1Q9UJC3 728 aaKnown RBP16.65■□□□□ 0.26
COMMD4-221ENST00000567935 FBXO2Q9UK22 296 aaPredicted RBP16.65■□□□□ 0.26
COMMD4-221ENST00000567935 MTMR7Q9Y216 660 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 PCDHB6Q9Y5E3 794 aa16.65■□□□□ 0.26
COMMD4-221ENST00000567935 CCL15-CCL14A0A0B4J2E2 113 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 PNMA6FA0A0J9YX94 578 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 CLRN2A0PK11 232 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 EVI5O60447 810 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 ZNF202O95125 648 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 GJB1P08034 283 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 CCL5P13501 91 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 EEF2P13639 858 aaKnown RBP16.64■□□□□ 0.25
COMMD4-221ENST00000567935 CCL15Q16663 113 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 CCDC96Q2M329 555 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 ARL6IP4Q66PJ3 421 aaKnown RBP16.64■□□□□ 0.25
COMMD4-221ENST00000567935 SHC4Q6S5L8 630 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 TEX2Q8IWB9 1127 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 ANKRD13AQ8IZ07 590 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 FAM200AQ8TCP9 573 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 PIBF1Q8WXW3 757 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 GPKOWQ92917 476 aaPredicted RBP eCLIP16.64■□□□□ 0.25
COMMD4-221ENST00000567935 MTMR8Q96EF0 704 aa16.64■□□□□ 0.25
COMMD4-221ENST00000567935 PYM1Q9BRP8 204 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms