RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 OS9Q13438 667 aaPredicted RBP16.64■□□□□ 0.25
SMG1-213ENST00000567737 CCDC17Q96LX7 622 aa16.64■□□□□ 0.25
SMG1-213ENST00000567737 FGD4Q96M96 766 aa16.64■□□□□ 0.25
SMG1-213ENST00000567737 SLF1Q9BQI6 1058 aa16.64■□□□□ 0.25
SMG1-213ENST00000567737 KATNBL1Q9H079 304 aa16.64■□□□□ 0.25
SMG1-213ENST00000567737 TRMT13Q9NUP7 481 aaKnown RBP16.64■□□□□ 0.25
SMG1-213ENST00000567737 GNEQ9Y223 722 aaKnown RBP16.64■□□□□ 0.25
SMG1-213ENST00000567737 DYNC1LI2O43237 492 aaPredicted RBP16.63■□□□□ 0.25
SMG1-213ENST00000567737 MAP3K13O43283 966 aa16.63■□□□□ 0.25
SMG1-213ENST00000567737 BAIAP3O94812 1187 aa16.63■□□□□ 0.25
SMG1-213ENST00000567737 PTPN5P54829 565 aa16.63■□□□□ 0.25
SMG1-213ENST00000567737 CPXCR1Q8N123 301 aa16.63■□□□□ 0.25
SMG1-213ENST00000567737 DYNLL2Q96FJ2 89 aa16.63■□□□□ 0.25
SMG1-213ENST00000567737 FBXO40Q9UH90 709 aa16.63■□□□□ 0.25
SMG1-213ENST00000567737 TNKSO95271 1327 aa16.63■□□□□ 0.25
SMG1-213ENST00000567737 PNMA6EA0A0J9YXQ4 647 aa16.62■□□□□ 0.25
SMG1-213ENST00000567737 E9PSI1 815 aa16.62■□□□□ 0.25
SMG1-213ENST00000567737 CYP2D6P10635 497 aa16.62■□□□□ 0.25
SMG1-213ENST00000567737 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.62■□□□□ 0.25
SMG1-213ENST00000567737 RETREG2Q8NC44 543 aa16.62■□□□□ 0.25
SMG1-213ENST00000567737 ANKS1AQ92625 1134 aa16.62■□□□□ 0.25
SMG1-213ENST00000567737 ZBED2Q9BTP6 218 aa16.62■□□□□ 0.25
SMG1-213ENST00000567737 UPF3BQ9BZI7 483 aaKnown RBP16.62■□□□□ 0.25
SMG1-213ENST00000567737 KANSL2Q9H9L4 492 aa16.62■□□□□ 0.25
SMG1-213ENST00000567737 SUGCTQ9HAC7 445 aa16.62■□□□□ 0.25
SMG1-213ENST00000567737 MTUS1Q9ULD2 1270 aa16.62■□□□□ 0.25
SMG1-213ENST00000567737 FAM50BQ9Y247 325 aa16.62■□□□□ 0.25
SMG1-213ENST00000567737 LCHNA4D1U4 455 aa16.61■□□□□ 0.25
SMG1-213ENST00000567737 ZBED4O75132 1171 aa16.61■□□□□ 0.25
SMG1-213ENST00000567737 SDR42E1Q8WUS8 393 aa16.61■□□□□ 0.25
SMG1-213ENST00000567737 DCP1AQ9NPI6 582 aaPredicted RBP16.61■□□□□ 0.25
SMG1-213ENST00000567737 PCDHB13Q9Y5F0 798 aa16.61■□□□□ 0.25
SMG1-213ENST00000567737 ATP2A1O14983 1001 aa16.6■□□□□ 0.25
SMG1-213ENST00000567737 GNAI2P04899 355 aa16.6■□□□□ 0.25
SMG1-213ENST00000567737 SMPD1P17405 629 aa16.6■□□□□ 0.25
SMG1-213ENST00000567737 PRPF38AQ8NAV1 312 aaKnown RBP16.6■□□□□ 0.25
SMG1-213ENST00000567737 CHST13Q8NET6 341 aa16.6■□□□□ 0.25
SMG1-213ENST00000567737 PRSS33Q8NF86 280 aa16.6■□□□□ 0.25
SMG1-213ENST00000567737 TGS1Q96RS0 853 aaKnown RBP16.6■□□□□ 0.25
SMG1-213ENST00000567737 ANTXR1Q9H6X2 564 aa16.6■□□□□ 0.25
SMG1-213ENST00000567737 PRKAG3Q9UGI9 489 aa16.6■□□□□ 0.25
SMG1-213ENST00000567737 DBNLQ9UJU6 430 aaKnown RBP16.6■□□□□ 0.25
SMG1-213ENST00000567737 Q9Y3F1 56 aa16.6■□□□□ 0.25
SMG1-213ENST00000567737 BRWD1Q9NSI6 2320 aa16.59■□□□□ 0.25
SMG1-213ENST00000567737 MCM3APO60318 1980 aa16.59■□□□□ 0.25
SMG1-213ENST00000567737 ASB14A6NK59 587 aa16.59■□□□□ 0.25
SMG1-213ENST00000567737 IQCF3P0C7M6 154 aa16.59■□□□□ 0.25
SMG1-213ENST00000567737 ZP2Q05996 745 aa16.59■□□□□ 0.25
SMG1-213ENST00000567737 NEK9Q8TD19 979 aa16.59■□□□□ 0.25
SMG1-213ENST00000567737 NUP88Q99567 741 aaPredicted RBP16.59■□□□□ 0.25
SMG1-213ENST00000567737 PRRX2Q99811 253 aa16.59■□□□□ 0.25
SMG1-213ENST00000567737 RAVER2Q9HCJ3 691 aaKnown RBP16.59■□□□□ 0.25
SMG1-213ENST00000567737 TLR7Q9NYK1 1049 aaKnown RBP16.59■□□□□ 0.25
SMG1-213ENST00000567737 SCN5AQ14524 2016 aa16.58■□□□□ 0.25
SMG1-213ENST00000567737 H3BQ06 376 aaPredicted RBP16.58■□□□□ 0.24
SMG1-213ENST00000567737 GFRA3O60609 400 aa16.58■□□□□ 0.24
SMG1-213ENST00000567737 PTGS1P23219 599 aa16.58■□□□□ 0.24
SMG1-213ENST00000567737 CDK8P49336 464 aa16.58■□□□□ 0.24
SMG1-213ENST00000567737 ERVK-21P61565 698 aa16.58■□□□□ 0.24
SMG1-213ENST00000567737 CNTN2Q02246 1040 aa16.58■□□□□ 0.24
SMG1-213ENST00000567737 IQSEC1Q6DN90 963 aa16.58■□□□□ 0.24
SMG1-213ENST00000567737 AMOTL1Q8IY63 956 aa16.58■□□□□ 0.24
SMG1-213ENST00000567737 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.58■□□□□ 0.24
SMG1-213ENST00000567737 CRBNQ96SW2 442 aa16.58■□□□□ 0.24
SMG1-213ENST00000567737 CCDC8Q9H0W5 538 aaPredicted RBP16.58■□□□□ 0.24
SMG1-213ENST00000567737 POLR3EQ9NVU0 708 aa16.58■□□□□ 0.24
SMG1-213ENST00000567737 ZNF318Q5VUA4 2279 aa16.58■□□□□ 0.24
SMG1-213ENST00000567737 WDR5P61964 334 aaKnown RBP16.57■□□□□ 0.24
SMG1-213ENST00000567737 BFSP2Q13515 415 aa16.57■□□□□ 0.24
SMG1-213ENST00000567737 FAM47CQ5HY64 1035 aa16.57■□□□□ 0.24
SMG1-213ENST00000567737 ADHFE1Q8IWW8 467 aa16.57■□□□□ 0.24
SMG1-213ENST00000567737 FAM9BQ8IZU0 186 aa16.57■□□□□ 0.24
SMG1-213ENST00000567737 CTNNA3Q9UI47 895 aa16.57■□□□□ 0.24
SMG1-213ENST00000567737 CACNA1AO00555 2505 aa16.57■□□□□ 0.24
SMG1-213ENST00000567737 MYH8P13535 1937 aa16.57■□□□□ 0.24
SMG1-213ENST00000567737 SLC9C2Q5TAH2 1124 aa16.56■□□□□ 0.24
SMG1-213ENST00000567737 EP400NLQ6ZTU2 488 aa16.56■□□□□ 0.24
SMG1-213ENST00000567737 TMCO2Q7Z6W1 182 aaPredicted RBP16.56■□□□□ 0.24
SMG1-213ENST00000567737 FAM133AQ8N9E0 248 aa16.56■□□□□ 0.24
SMG1-213ENST00000567737 KIFC2Q96AC6 838 aa16.56■□□□□ 0.24
SMG1-213ENST00000567737 RAD9AQ99638 391 aa16.56■□□□□ 0.24
SMG1-213ENST00000567737 GPHNQ9NQX3 736 aaPredicted RBP16.56■□□□□ 0.24
SMG1-213ENST00000567737 PDGFCQ9NRA1 345 aa16.56■□□□□ 0.24
SMG1-213ENST00000567737 HOMER2Q9NSB8 354 aa16.56■□□□□ 0.24
SMG1-213ENST00000567737 PCDHB8Q9UN66 801 aa16.56■□□□□ 0.24
SMG1-213ENST00000567737 LINC01553A4QN01 128 aa16.55■□□□□ 0.24
SMG1-213ENST00000567737 USP17L12C9JPN9 530 aa16.55■□□□□ 0.24
SMG1-213ENST00000567737 USP17L21D6R901 530 aa16.55■□□□□ 0.24
SMG1-213ENST00000567737 SURF6O75683 361 aaKnown RBP16.55■□□□□ 0.24
SMG1-213ENST00000567737 MYL3P08590 195 aa16.55■□□□□ 0.24
SMG1-213ENST00000567737 IRS1P35568 1242 aa16.55■□□□□ 0.24
SMG1-213ENST00000567737 CLCN6P51797 869 aa16.55■□□□□ 0.24
SMG1-213ENST00000567737 OAZ1P54368 228 aa16.55■□□□□ 0.24
SMG1-213ENST00000567737 TTF1Q15361 905 aaPredicted RBP16.55■□□□□ 0.24
SMG1-213ENST00000567737 PKN1Q16512 942 aa16.55■□□□□ 0.24
SMG1-213ENST00000567737 LRRFIP1Q32MZ4 808 aaKnown RBP16.55■□□□□ 0.24
SMG1-213ENST00000567737 C16orf86Q6ZW13 317 aa16.55■□□□□ 0.24
SMG1-213ENST00000567737 EEPD1Q7L9B9 569 aa16.55■□□□□ 0.24
SMG1-213ENST00000567737 LCORLQ8N3X6 602 aa16.55■□□□□ 0.24
SMG1-213ENST00000567737 ACAD9Q9H845 621 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms