RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	RIPK3	Q9Y572	518 aa		10.79	□□□□□ -0.68
FANCA-223	ENST00000567284	ABCB11	O95342	1321 aa		10.79	□□□□□ -0.68
FANCA-223	ENST00000567284	LCT	P09848	1927 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	MCM3AP	O60318	1980 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	ADAMTS3	O15072	1205 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	STX6	O43752	255 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	PDC	P20941	246 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	ADCY7	P51828	1080 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	ERVK-9	P63128	1117 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	ERVK-24	P63145	666 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	CRHR2	Q13324	411 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	PKP1	Q13835	747 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	UBE2S	Q16763	222 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284		Q3C1V9	767 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	FERMT3	Q86UX7	667 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	CCAR1	Q8IX12	1150 aa	Known RBP	10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	MB21D1	Q8N884	522 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	CCDC148	Q8NFR7	591 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	CCDC12	Q8WUD4	166 aa	Predicted RBP	10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	SPATC1L	Q9H0A9	340 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	C6orf50	Q9HD87	102 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	RNF146	Q9NTX7	359 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	ZNF214	Q9UL59	606 aa	Predicted RBP	10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	MRPL11	Q9Y3B7	192 aa	Known RBP	10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	RABGAP1	Q9Y3P9	1069 aa		10.78	□□□□□ -0.68
FANCA-223	ENST00000567284	THSD7B	Q9C0I4	1608 aa		10.77	□□□□□ -0.68
FANCA-223	ENST00000567284	hCG_1984214	I3L0E3	225 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	NFIB	O00712	420 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	TRPA1	O75762	1119 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	TBC1D8	O95759	1140 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	CFB	P00751	764 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	KRT2	P35908	639 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	MAP2K2	P36507	400 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	GCLC	P48506	637 aa	Predicted RBP	10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	TRAF1	Q13077	416 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	SAFB	Q15424	915 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	JAKMIP3	Q5VZ66	844 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	NSMF	Q6X4W1	530 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	REM2	Q8IYK8	340 aa	Predicted RBP	10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	ZNF713	Q8N859	430 aa	Predicted RBP	10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	GPRC5A	Q8NFJ5	357 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	RASGRP4	Q8TDF6	673 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	OXER1	Q8TDS5	423 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	TBC1D5	Q92609	795 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	CUL5	Q93034	780 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	PGBD1	Q96JS3	809 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	PHF20	Q9BVI0	1012 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	MOV10L1	Q9BXT6	1211 aa	Known RBP	10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	TEX13B	Q9BXU2	312 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	PSTPIP2	Q9H939	334 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	BRMS1	Q9HCU9	246 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	ZCCHC17	Q9NP64	241 aa	Known RBP	10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	SH3GLB2	Q9NR46	395 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	TMEM260	Q9NX78	707 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	BIN2	Q9UBW5	565 aa	Predicted RBP	10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	MTMR6	Q9Y217	621 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	KIAA1217	Q5T5P2	1943 aa		10.77	□□□□□ -0.69
FANCA-223	ENST00000567284	CA12	O43570	354 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	ALDH1A1	P00352	501 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	MMP1	P03956	469 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	ERCC3	P19447	782 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	CALML3	P27482	149 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	HOXA13	P31271	388 aa	Predicted RBP	10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	OAZ1	P54368	228 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	TKFC	Q3LXA3	575 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	PPP1R18	Q6NYC8	613 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	FCHSD1	Q86WN1	690 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	RIOX2	Q8IUF8	465 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	DIS3L2	Q8IYB7	885 aa	Known RBP	10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	BLID	Q8IZY5	108 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	FBXO18	Q8NFZ0	1043 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	CLEC4D	Q8WXI8	215 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	R3HDML	Q9H3Y0	253 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	ACAD9	Q9H845	621 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	EFCC1	Q9HA90	598 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	RIC8A	Q9NPQ8	531 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	RNF186	Q9NXI6	227 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	PCDHA4	Q9UN74	947 aa		10.76	□□□□□ -0.69
FANCA-223	ENST00000567284	BTBD18	B2RXH4	712 aa		10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	KIF28P	B7ZC32	967 aa		10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	OPLAH	O14841	1288 aa		10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	TLR2	O60603	784 aa		10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	SLC25A27	O95847	323 aa		10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	POLR2M	P0CAP2	368 aa		10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	ZSCAN22	P10073	491 aa	Predicted RBP	10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	GNA11	P29992	359 aa		10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	MRPL12	P52815	198 aa	Known RBP	10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	CCNA1	P78396	465 aa		10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	NR5A1	Q13285	461 aa		10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	NOM1	Q5C9Z4	860 aa	Known RBP	10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	USP17L6P	Q6QN14	398 aa		10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	MMP19	Q99542	508 aa		10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	ZMYND12	Q9H0C1	365 aa		10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	PORCN	Q9H237	461 aa		10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	CHMP5	Q9NZZ3	219 aa		10.75	□□□□□ -0.69
FANCA-223	ENST00000567284	PNMA2	Q9UL42	364 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms