RNA–Protein interactions for RNA: ENST00000567223.6

SMPD3-209, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-209ENST00000567223 CCDC144BQ3MJ40 725 aa21.87■■□□□ 1.09
SMPD3-209ENST00000567223 ENAHQ8N8S7 591 aaPredicted RBP21.87■■□□□ 1.09
SMPD3-209ENST00000567223 PNMA1Q8ND90 353 aa21.87■■□□□ 1.09
SMPD3-209ENST00000567223 LTBP2Q14767 1821 aa21.87■■□□□ 1.09
SMPD3-209ENST00000567223 FRMPD2Q68DX3 1309 aaPredicted RBP21.86■■□□□ 1.09
SMPD3-209ENST00000567223 A0A1W2PQ45 241 aaPredicted RBP21.86■■□□□ 1.09
SMPD3-209ENST00000567223 A0A1W2PQY0 241 aa21.86■■□□□ 1.09
SMPD3-209ENST00000567223 B4E1Z4 1266 aa21.86■■□□□ 1.09
SMPD3-209ENST00000567223 NUP133Q8WUM0 1156 aa21.86■■□□□ 1.09
SMPD3-209ENST00000567223 MTMR7Q9Y216 660 aa21.86■■□□□ 1.09
SMPD3-209ENST00000567223 LCTP09848 1927 aa21.86■■□□□ 1.09
SMPD3-209ENST00000567223 TNKSO95271 1327 aa21.85■■□□□ 1.09
SMPD3-209ENST00000567223 ADCY6O43306 1168 aa21.85■■□□□ 1.09
SMPD3-209ENST00000567223 ACLYP53396 1101 aa21.85■■□□□ 1.09
SMPD3-209ENST00000567223 ASPRV1Q53RT3 343 aa21.85■■□□□ 1.09
SMPD3-209ENST00000567223 ANKRD33Q7Z3H0 272 aa21.85■■□□□ 1.09
SMPD3-209ENST00000567223 PCSK9Q8NBP7 692 aaKnown RBP21.85■■□□□ 1.09
SMPD3-209ENST00000567223 RGS22Q8NE09 1264 aa21.85■■□□□ 1.09
SMPD3-209ENST00000567223 TOX2Q96NM4 488 aa21.85■■□□□ 1.09
SMPD3-209ENST00000567223 ZKSCAN3Q9BRR0 538 aa21.85■■□□□ 1.09
SMPD3-209ENST00000567223 KAT14Q9H8E8 782 aa21.85■■□□□ 1.09
SMPD3-209ENST00000567223 SPC25Q9HBM1 224 aa21.85■■□□□ 1.09
SMPD3-209ENST00000567223 GPCPD1Q9NPB8 672 aa21.85■■□□□ 1.09
SMPD3-209ENST00000567223 ADD3Q9UEY8 706 aaKnown RBP21.85■■□□□ 1.09
SMPD3-209ENST00000567223 PRKAG2Q9UGJ0 569 aa21.85■■□□□ 1.09
SMPD3-209ENST00000567223 Q9Y3F1 56 aa21.85■■□□□ 1.09
SMPD3-209ENST00000567223 MCM3APO60318 1980 aa21.85■■□□□ 1.09
SMPD3-209ENST00000567223 ELP1O95163 1332 aa21.84■■□□□ 1.09
SMPD3-209ENST00000567223 SGSM2O43147 1006 aa21.84■■□□□ 1.09
SMPD3-209ENST00000567223 SNAP25P60880 206 aa21.84■■□□□ 1.09
SMPD3-209ENST00000567223 IRX6P78412 446 aaPredicted RBP21.84■■□□□ 1.09
SMPD3-209ENST00000567223 TRIM60Q495X7 471 aa21.84■■□□□ 1.09
SMPD3-209ENST00000567223 CLEC4DQ8WXI8 215 aa21.84■■□□□ 1.09
SMPD3-209ENST00000567223 LENG1Q96BZ8 264 aaPredicted RBP21.84■■□□□ 1.09
SMPD3-209ENST00000567223 CHMP4CQ96CF2 233 aa21.84■■□□□ 1.09
SMPD3-209ENST00000567223 UBE2OQ9C0C9 1292 aaKnown RBP21.84■■□□□ 1.09
SMPD3-209ENST00000567223 GNEQ9Y223 722 aaKnown RBP21.84■■□□□ 1.09
SMPD3-209ENST00000567223 ATP11BQ9Y2G3 1177 aa21.84■■□□□ 1.09
SMPD3-209ENST00000567223 U3KPZ7 1027 aaPredicted RBP21.84■■□□□ 1.09
SMPD3-209ENST00000567223 FERMT2Q96AC1 680 aa21.83■■□□□ 1.09
SMPD3-209ENST00000567223 LBHD1Q9BQE6 289 aaPredicted RBP21.83■■□□□ 1.09
SMPD3-209ENST00000567223 UBAC1Q9BSL1 405 aa21.83■■□□□ 1.09
SMPD3-209ENST00000567223 VTA1Q9NP79 307 aa21.83■■□□□ 1.09
SMPD3-209ENST00000567223 PDLIM7Q9NR12 457 aa21.83■■□□□ 1.09
SMPD3-209ENST00000567223 LAMA2P24043 3122 aaKnown RBP21.83■■□□□ 1.08
SMPD3-209ENST00000567223 NFIBO00712 420 aa21.82■■□□□ 1.08
SMPD3-209ENST00000567223 CTAGE5O15320 804 aa21.82■■□□□ 1.08
SMPD3-209ENST00000567223 MYCNP04198 464 aaPredicted RBP21.82■■□□□ 1.08
SMPD3-209ENST00000567223 CYP21A2P08686 494 aa21.82■■□□□ 1.08
SMPD3-209ENST00000567223 SEC23AQ15436 765 aa21.82■■□□□ 1.08
SMPD3-209ENST00000567223 KCNA10Q16322 511 aa21.82■■□□□ 1.08
SMPD3-209ENST00000567223 IQSEC1Q6DN90 963 aa21.82■■□□□ 1.08
SMPD3-209ENST00000567223 NSMFQ6X4W1 530 aa21.82■■□□□ 1.08
SMPD3-209ENST00000567223 DNERQ8NFT8 737 aa21.82■■□□□ 1.08
SMPD3-209ENST00000567223 MROH7Q68CQ1 1323 aa21.81■■□□□ 1.08
SMPD3-209ENST00000567223 C6orf222P0C671 652 aaPredicted RBP21.81■■□□□ 1.08
SMPD3-209ENST00000567223 ALDH5A1P51649 535 aaPredicted RBP21.81■■□□□ 1.08
SMPD3-209ENST00000567223 TNFAIP2Q03169 654 aa21.81■■□□□ 1.08
SMPD3-209ENST00000567223 BAATQ14032 418 aaPredicted RBP21.81■■□□□ 1.08
SMPD3-209ENST00000567223 TAPT1Q6NXT6 567 aa21.81■■□□□ 1.08
SMPD3-209ENST00000567223 GLT1D1Q96MS3 346 aa21.81■■□□□ 1.08
SMPD3-209ENST00000567223 SEZ6LQ9BYH1 1024 aa21.81■■□□□ 1.08
SMPD3-209ENST00000567223 STARD7Q9NQZ5 370 aa21.81■■□□□ 1.08
SMPD3-209ENST00000567223 SOX1O00570 391 aaPredicted RBP21.8■■□□□ 1.08
SMPD3-209ENST00000567223 KIAA0355O15063 1070 aa21.8■■□□□ 1.08
SMPD3-209ENST00000567223 EDNRBP24530 442 aa21.8■■□□□ 1.08
SMPD3-209ENST00000567223 MDM2Q00987 491 aaPredicted RBP21.8■■□□□ 1.08
SMPD3-209ENST00000567223 TLE2Q04725 743 aa21.8■■□□□ 1.08
SMPD3-209ENST00000567223 TRDNQ13061 729 aa21.8■■□□□ 1.08
SMPD3-209ENST00000567223 IFIT1BQ5T764 474 aaKnown RBP21.8■■□□□ 1.08
SMPD3-209ENST00000567223 RNF207Q6ZRF8 634 aa21.8■■□□□ 1.08
SMPD3-209ENST00000567223 MAP4K1Q92918 833 aa21.8■■□□□ 1.08
SMPD3-209ENST00000567223 RBM47A0AV96 593 aaKnown RBP21.79■■□□□ 1.08
SMPD3-209ENST00000567223 MYADML2A6NDP7 307 aa21.79■■□□□ 1.08
SMPD3-209ENST00000567223 ASGR1P07306 291 aa21.79■■□□□ 1.08
SMPD3-209ENST00000567223 CLTBP09497 229 aa21.79■■□□□ 1.08
SMPD3-209ENST00000567223 PARP1P09874 1014 aaKnown RBP21.79■■□□□ 1.08
SMPD3-209ENST00000567223 GOLGA8HP0CJ92 632 aa21.79■■□□□ 1.08
SMPD3-209ENST00000567223 CDK7P50613 346 aa21.79■■□□□ 1.08
SMPD3-209ENST00000567223 RPS6P62753 249 aaKnown RBP21.79■■□□□ 1.08
SMPD3-209ENST00000567223 PTH1RQ03431 593 aa21.79■■□□□ 1.08
SMPD3-209ENST00000567223 MPHOSPH6Q99547 160 aaKnown RBP21.79■■□□□ 1.08
SMPD3-209ENST00000567223 ABCB11O95342 1321 aa21.79■■□□□ 1.08
SMPD3-209ENST00000567223 CABYRO75952 493 aa21.78■■□□□ 1.08
SMPD3-209ENST00000567223 CDC37Q16543 378 aaPredicted RBP21.78■■□□□ 1.08
SMPD3-209ENST00000567223 GNASQ5JWF2 1037 aa21.78■■□□□ 1.08
SMPD3-209ENST00000567223 TLK2Q86UE8 772 aa21.78■■□□□ 1.08
SMPD3-209ENST00000567223 ADGRF4Q8IZF3 695 aa21.78■■□□□ 1.08
SMPD3-209ENST00000567223 MTA3Q9BTC8 594 aa21.78■■□□□ 1.08
SMPD3-209ENST00000567223 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.77■■□□□ 1.08
SMPD3-209ENST00000567223 PTPDC1A2A3K4 754 aa21.77■■□□□ 1.08
SMPD3-209ENST00000567223 TRIM43BA6NCK2 446 aa21.77■■□□□ 1.08
SMPD3-209ENST00000567223 SMPD1P17405 629 aa21.77■■□□□ 1.08
SMPD3-209ENST00000567223 GHRHRQ02643 423 aa21.77■■□□□ 1.08
SMPD3-209ENST00000567223 DUSP28Q4G0W2 176 aa21.77■■□□□ 1.08
SMPD3-209ENST00000567223 SLC30A10Q6XR72 485 aa21.77■■□□□ 1.08
SMPD3-209ENST00000567223 CYB5R4Q7L1T6 521 aa21.77■■□□□ 1.08
SMPD3-209ENST00000567223 TRIM43Q96BQ3 446 aaPredicted RBP21.77■■□□□ 1.08
SMPD3-209ENST00000567223 MTMR8Q96EF0 704 aa21.77■■□□□ 1.08
SMPD3-209ENST00000567223 UBA5Q9GZZ9 404 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms