RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 DCCP43146 1447 aa12.88□□□□□ -0.35
CDH1-210ENST00000566612 TTLL1O95922 423 aa12.88□□□□□ -0.35
CDH1-210ENST00000566612 OAS2P29728 719 aaKnown RBP12.88□□□□□ -0.35
CDH1-210ENST00000566612 TXNRD1Q16881 649 aa12.88□□□□□ -0.35
CDH1-210ENST00000566612 HAUS3Q68CZ6 603 aa12.88□□□□□ -0.35
CDH1-210ENST00000566612 CLCN6P51797 869 aa12.88□□□□□ -0.35
CDH1-210ENST00000566612 ATP2C1P98194 919 aaPredicted RBP12.88□□□□□ -0.35
CDH1-210ENST00000566612 ICA1Q05084 483 aa12.88□□□□□ -0.35
CDH1-210ENST00000566612 RIOK1Q9BRS2 568 aaKnown RBP12.88□□□□□ -0.35
CDH1-210ENST00000566612 PCDHB13Q9Y5F0 798 aa12.88□□□□□ -0.35
CDH1-210ENST00000566612 PHLPP2Q6ZVD8 1323 aa12.88□□□□□ -0.35
CDH1-210ENST00000566612 TCHHQ07283 1943 aa12.88□□□□□ -0.35
CDH1-210ENST00000566612 CAMTA1Q9Y6Y1 1673 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 MFAP3LO75121 409 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 SMC1AQ14683 1233 aaKnown RBP12.87□□□□□ -0.35
CDH1-210ENST00000566612 TAX1BP1Q86VP1 789 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 FOXP4Q8IVH2 680 aaPredicted RBP12.87□□□□□ -0.35
CDH1-210ENST00000566612 TPH2Q8IWU9 490 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 FNBP4Q8N3X1 1017 aaPredicted RBP12.87□□□□□ -0.35
CDH1-210ENST00000566612 RDH13Q8NBN7 331 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 KIFC2Q96AC6 838 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 FAM107BQ9H098 131 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 POTEMA6NI47 508 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 SLC9C1Q4G0N8 1177 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 FAM26FQ5R3K3 315 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 PANK4Q9NVE7 773 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 CDC23Q9UJX2 597 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 FMN2Q9NZ56 1722 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 TCP10L2B9ZVM9 353 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 GCNT3O95395 438 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 WDR24Q96S15 920 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 POLD4Q9HCU8 107 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDH1-210ENST00000566612 HOMER2Q9NSB8 354 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 BCL9O00512 1426 aa12.87□□□□□ -0.35
CDH1-210ENST00000566612 BUB1O43683 1085 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 ZMYND10O75800 440 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 HPS3Q969F9 1004 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 MRPL44Q9H9J2 332 aaKnown RBP12.86□□□□□ -0.35
CDH1-210ENST00000566612 MEIS1O00470 390 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 PPIP5K2O43314 1243 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 UBXN2AP68543 259 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 KLHL30Q0D2K2 578 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 PABPC4Q13310 644 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDH1-210ENST00000566612 SMCR8Q8TEV9 937 aaPredicted RBP12.86□□□□□ -0.35
CDH1-210ENST00000566612 PANX2Q96RD6 677 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 HAUS4Q9H6D7 363 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 HPSEQ9Y251 543 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 LAD1O00515 517 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 ACTN4O43707 911 aaKnown RBP12.86□□□□□ -0.35
CDH1-210ENST00000566612 KRT13P13646 458 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 RPL13P26373 211 aaKnown RBP12.86□□□□□ -0.35
CDH1-210ENST00000566612 EEF1GP26641 437 aaKnown RBP12.86□□□□□ -0.35
CDH1-210ENST00000566612 IFFO1Q0D2I5 559 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 ASPRV1Q53RT3 343 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 EARS2Q5JPH6 523 aaKnown RBP12.86□□□□□ -0.35
CDH1-210ENST00000566612 WDR78Q5VTH9 848 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 MYCT1Q8N699 235 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 AK8Q96MA6 479 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 CCDC113Q9H0I3 377 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 LTN1O94822 1766 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 GRM4Q14833 912 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 LARGE2Q8N3Y3 721 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 DHTKD1Q96HY7 919 aaPredicted RBP12.86□□□□□ -0.35
CDH1-210ENST00000566612 LSM14BQ9BX40 385 aaKnown RBP12.86□□□□□ -0.35
CDH1-210ENST00000566612 NT5C3AQ9H0P0 336 aa12.86□□□□□ -0.35
CDH1-210ENST00000566612 CLRN2A0PK11 232 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 CCNE1P24864 410 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 TRAF1Q13077 416 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 UTP14CQ5TAP6 766 aaKnown RBP12.85□□□□□ -0.35
CDH1-210ENST00000566612 SRGAP1Q7Z6B7 1085 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 NLGN1Q8N2Q7 840 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 FBXL16Q8N461 479 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 TBC1D5Q92609 795 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 NAP1L4Q99733 375 aaKnown RBP12.85□□□□□ -0.35
CDH1-210ENST00000566612 PARD6BQ9BYG5 372 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 TSGA10Q9BZW7 698 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 BARHL2Q9NY43 387 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 RSPH14Q9UHP6 348 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 USP17L15C9J2P7 530 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 USP17L13C9JLJ4 530 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 USP17L11C9JVI0 530 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 USP17L18D6R9N7 530 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 USP17L22D6RA61 530 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 USP17L17D6RBQ6 530 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 USP17L19D6RCP7 530 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 USP17L20D6RJB6 530 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 PDE6BP35913 854 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 POLR2FP61218 127 aaKnown RBP12.85□□□□□ -0.35
CDH1-210ENST00000566612 TUBB4BP68371 445 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 USP17L24Q0WX57 530 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 NCAPHQ15003 741 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 USP17L6PQ6QN14 398 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 NBPF11Q86T75 865 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 RABEP2Q9H5N1 569 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 ARHGEF10LQ9HCE6 1279 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 SPATA31A5Q5VU36 1347 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 SPATA31A7Q8IWB4 1347 aa12.85□□□□□ -0.35
CDH1-210ENST00000566612 TMEM110-MUSTN1A8MSY1 372 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms