RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 HOMER2Q9NSB8 354 aa19.26■□□□□ 0.67
RNF40-207ENST00000565931 RBM27Q9P2N5 1060 aaKnown RBP19.26■□□□□ 0.67
RNF40-207ENST00000565931 PCDHA1Q9Y5I3 950 aa19.26■□□□□ 0.67
RNF40-207ENST00000565931 STRNO43815 780 aa19.25■□□□□ 0.67
RNF40-207ENST00000565931 CDKL5O76039 1030 aa19.25■□□□□ 0.67
RNF40-207ENST00000565931 SSRP1Q08945 709 aaKnown RBP19.25■□□□□ 0.67
RNF40-207ENST00000565931 PKN1Q16512 942 aa19.25■□□□□ 0.67
RNF40-207ENST00000565931 SNX21Q969T3 373 aa19.25■□□□□ 0.67
RNF40-207ENST00000565931 COA7Q96BR5 231 aa19.25■□□□□ 0.67
RNF40-207ENST00000565931 CWC22Q9HCG8 908 aaKnown RBP19.25■□□□□ 0.67
RNF40-207ENST00000565931 PRDM10Q9NQV6 1147 aa19.25■□□□□ 0.67
RNF40-207ENST00000565931 GJD2Q9UKL4 321 aa19.25■□□□□ 0.67
RNF40-207ENST00000565931 MRPL11Q9Y3B7 192 aaKnown RBP19.25■□□□□ 0.67
RNF40-207ENST00000565931 SLC15A5A6NIM6 579 aa19.24■□□□□ 0.67
RNF40-207ENST00000565931 DTNBO60941 627 aa19.24■□□□□ 0.67
RNF40-207ENST00000565931 GNRH1P01148 92 aa19.24■□□□□ 0.67
RNF40-207ENST00000565931 AKAP17AQ02040 695 aaKnown RBP19.24■□□□□ 0.67
RNF40-207ENST00000565931 PFKFB3Q16875 520 aaPredicted RBP19.24■□□□□ 0.67
RNF40-207ENST00000565931 MORN1Q5T089 497 aa19.24■□□□□ 0.67
RNF40-207ENST00000565931 TRIM22Q8IYM9 498 aa19.24■□□□□ 0.67
RNF40-207ENST00000565931 ABRAQ8N0Z2 381 aa19.24■□□□□ 0.67
RNF40-207ENST00000565931 NSUN7Q8NE18 718 aaKnown RBP19.24■□□□□ 0.67
RNF40-207ENST00000565931 IVNS1ABPQ9Y6Y0 642 aa19.24■□□□□ 0.67
RNF40-207ENST00000565931 NFIBO00712 420 aa19.23■□□□□ 0.67
RNF40-207ENST00000565931 FCER1AP12319 257 aa19.23■□□□□ 0.67
RNF40-207ENST00000565931 SCG2P13521 617 aa19.23■□□□□ 0.67
RNF40-207ENST00000565931 HOXD10P28358 340 aa19.23■□□□□ 0.67
RNF40-207ENST00000565931 GRB14Q14449 540 aa19.23■□□□□ 0.67
RNF40-207ENST00000565931 WWC2Q6AWC2 1192 aa19.23■□□□□ 0.67
RNF40-207ENST00000565931 OTOP1Q7RTM1 612 aa19.23■□□□□ 0.67
RNF40-207ENST00000565931 USP6NLQ92738 828 aa19.23■□□□□ 0.67
RNF40-207ENST00000565931 GPKOWQ92917 476 aaPredicted RBP eCLIP19.23■□□□□ 0.675e-7■■■■■ 43.5
RNF40-207ENST00000565931 MMP19Q99542 508 aa19.23■□□□□ 0.67
RNF40-207ENST00000565931 LLPHQ9BRT6 129 aaKnown RBP19.23■□□□□ 0.67
RNF40-207ENST00000565931 A1CFQ9NQ94 594 aaKnown RBP19.23■□□□□ 0.67
RNF40-207ENST00000565931 TRIM17Q9Y577 477 aa19.23■□□□□ 0.67
RNF40-207ENST00000565931 STK36Q9NRP7 1315 aa19.23■□□□□ 0.67
RNF40-207ENST00000565931 PCNTO95613 3336 aa19.22■□□□□ 0.67
RNF40-207ENST00000565931 OPLAHO14841 1288 aa19.22■□□□□ 0.67
RNF40-207ENST00000565931 JAK2O60674 1132 aa19.22■□□□□ 0.67
RNF40-207ENST00000565931 DEXIO95424 95 aa19.22■□□□□ 0.67
RNF40-207ENST00000565931 KCTD2Q14681 263 aa19.22■□□□□ 0.67
RNF40-207ENST00000565931 HEATR3Q7Z4Q2 680 aa19.22■□□□□ 0.67
RNF40-207ENST00000565931 RGS22Q8NE09 1264 aa19.22■□□□□ 0.67
RNF40-207ENST00000565931 SOCS4Q8WXH5 440 aa19.22■□□□□ 0.67
RNF40-207ENST00000565931 TBC1D5Q92609 795 aa19.22■□□□□ 0.67
RNF40-207ENST00000565931 NUDT12Q9BQG2 462 aa19.22■□□□□ 0.67
RNF40-207ENST00000565931 ORC3Q9UBD5 711 aaPredicted RBP19.22■□□□□ 0.67
RNF40-207ENST00000565931 SRRDQ9UH36 339 aa19.22■□□□□ 0.67
RNF40-207ENST00000565931 GABRQQ9UN88 632 aa19.22■□□□□ 0.67
RNF40-207ENST00000565931 PTPDC1A2A3K4 754 aa19.21■□□□□ 0.67
RNF40-207ENST00000565931 hCG_1984214I3L0E3 225 aa19.21■□□□□ 0.67
RNF40-207ENST00000565931 STXBP3O00186 592 aa19.21■□□□□ 0.67
RNF40-207ENST00000565931 FDPSP14324 419 aaKnown RBP19.21■□□□□ 0.67
RNF40-207ENST00000565931 ADORA2AP29274 412 aa19.21■□□□□ 0.67
RNF40-207ENST00000565931 PRKCZQ05513 592 aa19.21■□□□□ 0.67
RNF40-207ENST00000565931 MAP2K5Q13163 448 aa19.21■□□□□ 0.67
RNF40-207ENST00000565931 TYW1BQ6NUM6 668 aa19.21■□□□□ 0.67
RNF40-207ENST00000565931 NSMFQ6X4W1 530 aa19.21■□□□□ 0.67
RNF40-207ENST00000565931 MCF2L2Q86YR7 1114 aa19.21■□□□□ 0.67
RNF40-207ENST00000565931 ANKRD35Q8N283 1001 aa19.21■□□□□ 0.67
RNF40-207ENST00000565931 ZNF713Q8N859 430 aaPredicted RBP19.21■□□□□ 0.67
RNF40-207ENST00000565931 SMARCC2Q8TAQ2 1214 aa19.21■□□□□ 0.67
RNF40-207ENST00000565931 BARHL2Q9NY43 387 aa19.21■□□□□ 0.67
RNF40-207ENST00000565931 DNAJC25-GNG10A0A024R161 153 aa19.2■□□□□ 0.66
RNF40-207ENST00000565931 K7ELQ4 463 aaPredicted RBP19.2■□□□□ 0.66
RNF40-207ENST00000565931 COBLO75128 1261 aa19.2■□□□□ 0.66
RNF40-207ENST00000565931 FLT3LGP49771 235 aa19.2■□□□□ 0.66
RNF40-207ENST00000565931 PRMT2P55345 433 aa19.2■□□□□ 0.66
RNF40-207ENST00000565931 GHRHRQ02643 423 aa19.2■□□□□ 0.66
RNF40-207ENST00000565931 CUL4AQ13619 759 aa19.2■□□□□ 0.66
RNF40-207ENST00000565931 BAATQ14032 418 aaPredicted RBP19.2■□□□□ 0.66
RNF40-207ENST00000565931 CTU1Q7Z7A3 348 aaKnown RBP19.2■□□□□ 0.66
RNF40-207ENST00000565931 DDX11Q96FC9 970 aa19.2■□□□□ 0.66
RNF40-207ENST00000565931 MAF1Q9H063 256 aa19.2■□□□□ 0.66
RNF40-207ENST00000565931 CYP39A1Q9NYL5 469 aa19.2■□□□□ 0.66
RNF40-207ENST00000565931 PGK2P07205 417 aa19.19■□□□□ 0.66
RNF40-207ENST00000565931 HOXC6P09630 235 aa19.19■□□□□ 0.66
RNF40-207ENST00000565931 CYP2B6P20813 491 aa19.19■□□□□ 0.66
RNF40-207ENST00000565931 RPS6P62753 249 aaKnown RBP19.19■□□□□ 0.66
RNF40-207ENST00000565931 PPP1R18Q6NYC8 613 aa19.19■□□□□ 0.66
RNF40-207ENST00000565931 RNF207Q6ZRF8 634 aa19.19■□□□□ 0.66
RNF40-207ENST00000565931 SHISA4Q96DD7 197 aa19.19■□□□□ 0.66
RNF40-207ENST00000565931 AIFM3Q96NN9 605 aa19.19■□□□□ 0.66
RNF40-207ENST00000565931 PFASO15067 1338 aa19.19■□□□□ 0.66
RNF40-207ENST00000565931 COL11A1P12107 1806 aaPredicted RBP19.18■□□□□ 0.66
RNF40-207ENST00000565931 RGS2P41220 211 aa19.18■□□□□ 0.66
RNF40-207ENST00000565931 HSD17B4P51659 736 aa19.18■□□□□ 0.66
RNF40-207ENST00000565931 NAPAP54920 295 aa19.18■□□□□ 0.66
RNF40-207ENST00000565931 IRF5Q13568 498 aa19.18■□□□□ 0.66
RNF40-207ENST00000565931 ZNF792Q3KQV3 632 aa19.18■□□□□ 0.66
RNF40-207ENST00000565931 SLC30A10Q6XR72 485 aa19.18■□□□□ 0.66
RNF40-207ENST00000565931 DPP9Q86TI2 863 aa19.18■□□□□ 0.66
RNF40-207ENST00000565931 HSCBQ8IWL3 235 aa19.18■□□□□ 0.66
RNF40-207ENST00000565931 SAMD3Q8N6K7 520 aa19.18■□□□□ 0.66
RNF40-207ENST00000565931 FAM133AQ8N9E0 248 aa19.18■□□□□ 0.66
RNF40-207ENST00000565931 NPLOC4Q8TAT6 608 aa19.18■□□□□ 0.66
RNF40-207ENST00000565931 POTEB2H3BUK9 544 aa19.17■□□□□ 0.66
RNF40-207ENST00000565931 CFBP00751 764 aa19.17■□□□□ 0.66
RNF40-207ENST00000565931 XRCC5P13010 732 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms