RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 SNX17Q15036 470 aa12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 TMEM63BQ5T3F8 832 aa12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 EEPD1Q7L9B9 569 aa12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 SH3RF1Q7Z6J0 888 aa12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 DGKHQ86XP1 1220 aa12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 PNMA1Q8ND90 353 aa12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 KLHDC9Q8NEP7 349 aa12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 CLEC4DQ8WXI8 215 aa12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 ZSCAN10Q96SZ4 725 aaPredicted RBP12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 UBA5Q9GZZ9 404 aa12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 ABHD16BQ9H3Z7 469 aa12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 PRDM5Q9NQX1 630 aaPredicted RBP12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 CTNNA3Q9UI47 895 aa12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 TAF6LQ9Y6J9 622 aa12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 A0A1W2PPC1 479 aa12.84□□□□□ -0.35
NSMCE1-210ENST00000565626 DUSP11O75319 330 aaKnown RBP12.84□□□□□ -0.35
NSMCE1-210ENST00000565626 TLE2Q04725 743 aa12.84□□□□□ -0.35
NSMCE1-210ENST00000565626 KCNA10Q16322 511 aa12.84□□□□□ -0.35
NSMCE1-210ENST00000565626 CCSAPQ6IQ19 270 aaPredicted RBP12.84□□□□□ -0.35
NSMCE1-210ENST00000565626 CYB5R4Q7L1T6 521 aa12.84□□□□□ -0.35
NSMCE1-210ENST00000565626 IQCA1Q86XH1 822 aa12.84□□□□□ -0.35
NSMCE1-210ENST00000565626 ANKS1AQ92625 1134 aa12.84□□□□□ -0.35
NSMCE1-210ENST00000565626 PDGFCQ9NRA1 345 aa12.84□□□□□ -0.35
NSMCE1-210ENST00000565626 COL6A3P12111 3177 aa12.84□□□□□ -0.35
NSMCE1-210ENST00000565626 TNKSO95271 1327 aa12.84□□□□□ -0.35
NSMCE1-210ENST00000565626 LAMA4Q16363 1823 aa12.83□□□□□ -0.35
NSMCE1-210ENST00000565626 TRIM43BA6NCK2 446 aa12.83□□□□□ -0.36
NSMCE1-210ENST00000565626 CTAGE5O15320 804 aa12.83□□□□□ -0.36
NSMCE1-210ENST00000565626 C6orf222P0C671 652 aaPredicted RBP12.83□□□□□ -0.36
NSMCE1-210ENST00000565626 ITGB8P26012 769 aa12.83□□□□□ -0.36
NSMCE1-210ENST00000565626 ACLYP53396 1101 aa12.83□□□□□ -0.36
NSMCE1-210ENST00000565626 SLC30A10Q6XR72 485 aa12.83□□□□□ -0.36
NSMCE1-210ENST00000565626 FBXO16Q8IX29 292 aaPredicted RBP12.83□□□□□ -0.36
NSMCE1-210ENST00000565626 TDHQ8IZJ6 230 aa12.83□□□□□ -0.36
NSMCE1-210ENST00000565626 TRIM43Q96BQ3 446 aaPredicted RBP12.83□□□□□ -0.36
NSMCE1-210ENST00000565626 LBHD1Q9BQE6 289 aaPredicted RBP12.83□□□□□ -0.36
NSMCE1-210ENST00000565626 KAT14Q9H8E8 782 aa12.83□□□□□ -0.36
NSMCE1-210ENST00000565626 PDLIM7Q9NR12 457 aa12.83□□□□□ -0.36
NSMCE1-210ENST00000565626 PTPDC1A2A3K4 754 aa12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 ASB14A6NK59 587 aa12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 PQBP1O60828 265 aaKnown RBP12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 CYP21A2P08686 494 aa12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 CALML3P27482 149 aa12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 GJA9P57773 515 aa12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 BEX3Q00994 111 aa12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 TNFAIP2Q03169 654 aa12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 USH1GQ495M9 461 aa12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 GPATCH4Q5T3I0 446 aaKnown RBP12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 C1orf53Q5VUE5 145 aa12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 TAPT1Q6NXT6 567 aa12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 NOL8Q76FK4 1167 aaKnown RBP12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 UBAC1Q9BSL1 405 aa12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 TSEN34Q9BSV6 310 aaKnown RBP12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 KRT23Q9C075 422 aa12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 UPF3AQ9H1J1 476 aaKnown RBP12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 PRKAG2Q9UGJ0 569 aa12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 RAD50Q92878 1312 aa12.82□□□□□ -0.36
NSMCE1-210ENST00000565626 SGSM2O43147 1006 aa12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 SMPD1P17405 629 aa12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 ALDH5A1P51649 535 aaPredicted RBP12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 RPS6P62753 249 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 SEC23AQ15436 765 aa12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 CDC37Q16543 378 aaPredicted RBP12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 CCDC178Q5BJE1 867 aa12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 GNASQ5JWF2 1037 aa12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 STOX1Q6ZVD7 989 aa12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 ADGRF4Q8IZF3 695 aa12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 STAG2Q8N3U4 1231 aa12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 RUFY2Q8WXA3 655 aa12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 TBC1D5Q92609 795 aa12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 BADQ92934 168 aa12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 CNNM2Q9H8M5 875 aa12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 SENP2Q9HC62 589 aa12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 VAT1LQ9HCJ6 419 aa12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 STARD7Q9NQZ5 370 aa12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 GNEQ9Y223 722 aaKnown RBP12.81□□□□□ -0.36
NSMCE1-210ENST00000565626 LCTP09848 1927 aa12.8□□□□□ -0.36
NSMCE1-210ENST00000565626 MOXD2PA6NHM9 499 aa12.8□□□□□ -0.36
NSMCE1-210ENST00000565626 ASGR1P07306 291 aa12.8□□□□□ -0.36
NSMCE1-210ENST00000565626 PARP1P09874 1014 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-210ENST00000565626 CST5P28325 142 aaPredicted RBP12.8□□□□□ -0.36
NSMCE1-210ENST00000565626 IFIT1BQ5T764 474 aaKnown RBP12.8□□□□□ -0.36
NSMCE1-210ENST00000565626 RNF207Q6ZRF8 634 aa12.8□□□□□ -0.36
NSMCE1-210ENST00000565626 CHST3Q7LGC8 479 aa12.8□□□□□ -0.36
NSMCE1-210ENST00000565626 MORC4Q8TE76 937 aa12.8□□□□□ -0.36
NSMCE1-210ENST00000565626 SPC25Q9HBM1 224 aa12.8□□□□□ -0.36
NSMCE1-210ENST00000565626 WDR19Q8NEZ3 1342 aa12.8□□□□□ -0.36
NSMCE1-210ENST00000565626 A0A0C4DFX4 3053 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 E7EWF7 191 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 DYNC1LI2O43237 492 aaPredicted RBP12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 DHX16O60231 1041 aaKnown RBP12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 CLTBP09497 229 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 NT5C2P49902 561 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 FAAP100Q0VG06 881 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 SLC35G1Q2M3R5 365 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 QRICH1Q2TAL8 776 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 LRIT3Q3SXY7 679 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 ASPRV1Q53RT3 343 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 C9orf50Q5SZB4 431 aa12.79□□□□□ -0.36
NSMCE1-210ENST00000565626 CXCL17Q6UXB2 119 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms