RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 NUP133Q8WUM0 1156 aa23.36■■□□□ 1.33
CLN6-206ENST00000565471 SPC25Q9HBM1 224 aa23.36■■□□□ 1.33
CLN6-206ENST00000565471 PRDM5Q9NQX1 630 aaPredicted RBP23.36■■□□□ 1.33
CLN6-206ENST00000565471 GJA9P57773 515 aa23.35■■□□□ 1.33
CLN6-206ENST00000565471 IMMTQ16891 758 aaKnown RBP23.35■■□□□ 1.33
CLN6-206ENST00000565471 NSMFQ6X4W1 530 aa23.35■■□□□ 1.33
CLN6-206ENST00000565471 IQCA1Q86XH1 822 aa23.35■■□□□ 1.33
CLN6-206ENST00000565471 PCSK9Q8NBP7 692 aaKnown RBP23.35■■□□□ 1.33
CLN6-206ENST00000565471 STARD7Q9NQZ5 370 aa23.35■■□□□ 1.33
CLN6-206ENST00000565471 LRRC37A2A6NM11 1700 aa23.35■■□□□ 1.33
CLN6-206ENST00000565471 ASTN1O14525 1302 aa23.34■■□□□ 1.33
CLN6-206ENST00000565471 MYADML2A6NDP7 307 aa23.34■■□□□ 1.33
CLN6-206ENST00000565471 KDM4AO75164 1064 aa23.34■■□□□ 1.33
CLN6-206ENST00000565471 C6orf222P0C671 652 aaPredicted RBP23.34■■□□□ 1.33
CLN6-206ENST00000565471 GSPT1P15170 499 aaKnown RBP23.34■■□□□ 1.33
CLN6-206ENST00000565471 NKX3-2P78367 333 aa23.34■■□□□ 1.33
CLN6-206ENST00000565471 KCNA10Q16322 511 aa23.34■■□□□ 1.33
CLN6-206ENST00000565471 GPATCH4Q5T3I0 446 aaKnown RBP23.34■■□□□ 1.33
CLN6-206ENST00000565471 ANKS1AQ92625 1134 aa23.34■■□□□ 1.33
CLN6-206ENST00000565471 ZKSCAN3Q9BRR0 538 aa23.34■■□□□ 1.33
CLN6-206ENST00000565471 WDR19Q8NEZ3 1342 aa23.33■■□□□ 1.33
CLN6-206ENST00000565471 RAD50Q92878 1312 aa23.33■■□□□ 1.33
CLN6-206ENST00000565471 LCTP09848 1927 aa23.33■■□□□ 1.33
CLN6-206ENST00000565471 CLTBP09497 229 aa23.33■■□□□ 1.33
CLN6-206ENST00000565471 ANKRD33Q7Z3H0 272 aa23.33■■□□□ 1.33
CLN6-206ENST00000565471 MORC4Q8TE76 937 aa23.33■■□□□ 1.33
CLN6-206ENST00000565471 TOX2Q96NM4 488 aa23.33■■□□□ 1.33
CLN6-206ENST00000565471 ELP1O95163 1332 aa23.33■■□□□ 1.32
CLN6-206ENST00000565471 LOC102724159A0A0B4J2E5 919 aa23.32■■□□□ 1.32
CLN6-206ENST00000565471 TRIM43BA6NCK2 446 aa23.32■■□□□ 1.32
CLN6-206ENST00000565471 B4E1Z4 1266 aa23.32■■□□□ 1.32
CLN6-206ENST00000565471 PWP2Q15269 919 aaKnown RBP23.32■■□□□ 1.32
CLN6-206ENST00000565471 SH3RF1Q7Z6J0 888 aa23.32■■□□□ 1.32
CLN6-206ENST00000565471 TRIM43Q96BQ3 446 aaPredicted RBP23.32■■□□□ 1.32
CLN6-206ENST00000565471 GLT1D1Q96MS3 346 aa23.32■■□□□ 1.32
CLN6-206ENST00000565471 KRT23Q9C075 422 aa23.32■■□□□ 1.32
CLN6-206ENST00000565471 CNNM2Q9H8M5 875 aa23.32■■□□□ 1.32
CLN6-206ENST00000565471 ADD3Q9UEY8 706 aaKnown RBP23.32■■□□□ 1.32
CLN6-206ENST00000565471 SZT2Q5T011 3432 aa23.31■■□□□ 1.32
CLN6-206ENST00000565471 NFIBO00712 420 aa23.31■■□□□ 1.32
CLN6-206ENST00000565471 TNFAIP2Q03169 654 aa23.31■■□□□ 1.32
CLN6-206ENST00000565471 BAATQ14032 418 aaPredicted RBP23.31■■□□□ 1.32
CLN6-206ENST00000565471 PNMA1Q8ND90 353 aa23.31■■□□□ 1.32
CLN6-206ENST00000565471 BADQ92934 168 aa23.31■■□□□ 1.32
CLN6-206ENST00000565471 ZSCAN10Q96SZ4 725 aaPredicted RBP23.31■■□□□ 1.32
CLN6-206ENST00000565471 IL25Q9H293 177 aa23.31■■□□□ 1.32
CLN6-206ENST00000565471 GNEQ9Y223 722 aaKnown RBP23.31■■□□□ 1.32
CLN6-206ENST00000565471 LAMA3Q16787 3333 aa23.31■■□□□ 1.32
CLN6-206ENST00000565471 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.3■■□□□ 1.32
CLN6-206ENST00000565471 KIAA0355O15063 1070 aa23.3■■□□□ 1.32
CLN6-206ENST00000565471 CTAGE5O15320 804 aa23.3■■□□□ 1.32
CLN6-206ENST00000565471 PQBP1O60828 265 aaKnown RBP23.3■■□□□ 1.32
CLN6-206ENST00000565471 ASGR1P07306 291 aa23.3■■□□□ 1.32
CLN6-206ENST00000565471 GNASQ5JWF2 1037 aa23.3■■□□□ 1.32
CLN6-206ENST00000565471 CLEC4DQ8WXI8 215 aa23.3■■□□□ 1.32
CLN6-206ENST00000565471 KAT14Q9H8E8 782 aa23.3■■□□□ 1.32
CLN6-206ENST00000565471 VTA1Q9NP79 307 aa23.3■■□□□ 1.32
CLN6-206ENST00000565471 ZSWIM5Q9P217 1185 aa23.3■■□□□ 1.32
CLN6-206ENST00000565471 MROH7Q68CQ1 1323 aa23.3■■□□□ 1.32
CLN6-206ENST00000565471 DCDC2CA8MYV0 355 aa23.29■■□□□ 1.32
CLN6-206ENST00000565471 IRX5P78411 483 aaPredicted RBP23.29■■□□□ 1.32
CLN6-206ENST00000565471 IRX6P78412 446 aaPredicted RBP23.29■■□□□ 1.32
CLN6-206ENST00000565471 IQSEC1Q6DN90 963 aa23.29■■□□□ 1.32
CLN6-206ENST00000565471 ENAHQ8N8S7 591 aaPredicted RBP23.29■■□□□ 1.32
CLN6-206ENST00000565471 RUFY2Q8WXA3 655 aa23.29■■□□□ 1.32
CLN6-206ENST00000565471 TNKSO95271 1327 aa23.29■■□□□ 1.32
CLN6-206ENST00000565471 PTPDC1A2A3K4 754 aa23.28■■□□□ 1.32
CLN6-206ENST00000565471 GOLGA8HP0CJ92 632 aa23.28■■□□□ 1.32
CLN6-206ENST00000565471 ALDH5A1P51649 535 aaPredicted RBP23.28■■□□□ 1.32
CLN6-206ENST00000565471 FAAP100Q0VG06 881 aa23.28■■□□□ 1.32
CLN6-206ENST00000565471 ASPRV1Q53RT3 343 aa23.28■■□□□ 1.32
CLN6-206ENST00000565471 TAPT1Q6NXT6 567 aa23.28■■□□□ 1.32
CLN6-206ENST00000565471 RNF207Q6ZRF8 634 aa23.28■■□□□ 1.32
CLN6-206ENST00000565471 NOL8Q76FK4 1167 aaKnown RBP23.28■■□□□ 1.32
CLN6-206ENST00000565471 TLK2Q86UE8 772 aa23.28■■□□□ 1.32
CLN6-206ENST00000565471 FBXO16Q8IX29 292 aaPredicted RBP23.28■■□□□ 1.32
CLN6-206ENST00000565471 PURBQ96QR8 312 aaKnown RBP23.28■■□□□ 1.32
CLN6-206ENST00000565471 Q9Y3F1 56 aa23.28■■□□□ 1.32
CLN6-206ENST00000565471 A0A0U1RQG5 324 aaPredicted RBP23.27■■□□□ 1.32
CLN6-206ENST00000565471 SMPD1P17405 629 aa23.27■■□□□ 1.32
CLN6-206ENST00000565471 CDK7P50613 346 aa23.27■■□□□ 1.32
CLN6-206ENST00000565471 UBAC1Q9BSL1 405 aa23.27■■□□□ 1.32
CLN6-206ENST00000565471 MAF1Q9H063 256 aa23.27■■□□□ 1.32
CLN6-206ENST00000565471 PDGFCQ9NRA1 345 aa23.27■■□□□ 1.32
CLN6-206ENST00000565471 TMEM39AQ9NV64 488 aa23.27■■□□□ 1.32
CLN6-206ENST00000565471 DDX49Q9Y6V7 483 aaKnown RBP23.27■■□□□ 1.32
CLN6-206ENST00000565471 RAG1P15918 1043 aa23.26■■□□□ 1.31
CLN6-206ENST00000565471 ITGB8P26012 769 aa23.26■■□□□ 1.31
CLN6-206ENST00000565471 CHMLP26374 656 aa23.26■■□□□ 1.31
CLN6-206ENST00000565471 SHHQ15465 462 aa23.26■■□□□ 1.31
CLN6-206ENST00000565471 SLC30A10Q6XR72 485 aa23.26■■□□□ 1.31
CLN6-206ENST00000565471 EEPD1Q7L9B9 569 aa23.26■■□□□ 1.31
CLN6-206ENST00000565471 DEFB123Q8N688 67 aa23.26■■□□□ 1.31
CLN6-206ENST00000565471 UBA5Q9GZZ9 404 aa23.26■■□□□ 1.31
CLN6-206ENST00000565471 AP5M1Q9H0R1 490 aa23.26■■□□□ 1.31
CLN6-206ENST00000565471 ARVCFO00192 962 aa23.25■■□□□ 1.31
CLN6-206ENST00000565471 CABYRO75952 493 aa23.25■■□□□ 1.31
CLN6-206ENST00000565471 RPS6P62753 249 aaKnown RBP23.25■■□□□ 1.31
CLN6-206ENST00000565471 BEX3Q00994 111 aa23.25■■□□□ 1.31
CLN6-206ENST00000565471 FSCN1Q16658 493 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms