RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 SUGP1Q8IWZ8 645 aaKnown RBP10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 EDAQ92838 391 aa10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 PBXIP1Q96AQ6 731 aa10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 POP1Q99575 1024 aaKnown RBP10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 API5Q9BZZ5 524 aaKnown RBP10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 SMC4Q9NTJ3 1288 aa10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 FPGT-TNNI3KV9GXZ4 949 aa10.91□□□□□ -0.66
VPS9D1-205ENST00000565452 ZNFX1Q9P2E3 1918 aaKnown RBP10.9□□□□□ -0.66
VPS9D1-205ENST00000565452 USP17L12C9JPN9 530 aa10.9□□□□□ -0.66
VPS9D1-205ENST00000565452 USP17L21D6R901 530 aa10.9□□□□□ -0.66
VPS9D1-205ENST00000565452 NCK2O43639 380 aa10.9□□□□□ -0.66
VPS9D1-205ENST00000565452 SMPD1P17405 629 aa10.9□□□□□ -0.66
VPS9D1-205ENST00000565452 IRS1P35568 1242 aa10.9□□□□□ -0.66
VPS9D1-205ENST00000565452 CLEC10AQ8IUN9 316 aa10.9□□□□□ -0.66
VPS9D1-205ENST00000565452 MRPL38Q96DV4 380 aaKnown RBP10.9□□□□□ -0.66
VPS9D1-205ENST00000565452 RIOK1Q9BRS2 568 aaKnown RBP10.9□□□□□ -0.66
VPS9D1-205ENST00000565452 NOB1Q9ULX3 412 aaKnown RBP10.9□□□□□ -0.66
VPS9D1-205ENST00000565452 BRWD1Q9NSI6 2320 aa10.89□□□□□ -0.67
VPS9D1-205ENST00000565452 GJB5O95377 273 aa10.89□□□□□ -0.67
VPS9D1-205ENST00000565452 OS9Q13438 667 aaPredicted RBP10.89□□□□□ -0.67
VPS9D1-205ENST00000565452 LRRFIP1Q32MZ4 808 aaKnown RBP10.89□□□□□ -0.67
VPS9D1-205ENST00000565452 FAM47CQ5HY64 1035 aa10.89□□□□□ -0.67
VPS9D1-205ENST00000565452 FBXO22Q8NEZ5 403 aa10.89□□□□□ -0.67
VPS9D1-205ENST00000565452 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.89□□□□□ -0.67
VPS9D1-205ENST00000565452 ATOH1Q92858 354 aaPredicted RBP10.89□□□□□ -0.67
VPS9D1-205ENST00000565452 PABPC5Q96DU9 382 aaKnown RBP10.89□□□□□ -0.67
VPS9D1-205ENST00000565452 DYNLL2Q96FJ2 89 aa10.89□□□□□ -0.67
VPS9D1-205ENST00000565452 FGD4Q96M96 766 aa10.89□□□□□ -0.67
VPS9D1-205ENST00000565452 RAVER2Q9HCJ3 691 aaKnown RBP10.89□□□□□ -0.67
VPS9D1-205ENST00000565452 NOD1Q9Y239 953 aa10.89□□□□□ -0.67
VPS9D1-205ENST00000565452 TMEM221A6NGB7 291 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 M0R296 226 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 EFCAB14O75071 495 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 PARNO95453 639 aaKnown RBP10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 GNAI2P04899 355 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 CDK8P49336 464 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 OAZ1P54368 228 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 WDR5P61964 334 aaKnown RBP10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 CNTN2Q02246 1040 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 PTPN11Q06124 597 aaPredicted RBP10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 TCF15Q12870 199 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 BRDTQ58F21 947 aaPredicted RBP10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 NFRKBQ6P4R8 1299 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 TRIM67Q6ZTA4 783 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 USP34Q70CQ2 3546 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 RNF135Q8IUD6 432 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 AMOTL1Q8IY63 956 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 CCDC155Q8N6L0 562 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 FAM133AQ8N9E0 248 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 BANK1Q8NDB2 785 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 CFAP54Q96N23 3096 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 MTG1Q9BT17 334 aaPredicted RBP10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 DCP1AQ9NPI6 582 aaPredicted RBP10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 MUTYHQ9UIF7 546 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 COG6Q9Y2V7 657 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 INSL6Q9Y581 213 aa10.88□□□□□ -0.67
VPS9D1-205ENST00000565452 ABHD14A-ACY1A0A1B0GW23 586 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 LINC01553A4QN01 128 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 E9PSI1 815 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 F5H6K3 240 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 KPNA6O60684 536 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 MYL3P08590 195 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 FDX1P10109 184 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 CYP2D6P10635 497 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 CPT1AP50416 773 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 EVX2Q03828 476 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 KLRC3Q07444 240 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 NBPF20Q3BBV1 942 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 TIGD5Q53EQ6 642 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 TAPT1Q6NXT6 567 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 KIAA1211Q6ZU35 1233 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 KIFC2Q96AC6 838 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 SLC38A10Q9HBR0 1119 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 PDGFCQ9NRA1 345 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 GBF1Q92538 1859 aa10.87□□□□□ -0.67
VPS9D1-205ENST00000565452 SOWAHBA6NEL2 793 aa10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 PURAQ00577 322 aaKnown RBP10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 IKBKEQ14164 716 aa10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 TTF1Q15361 905 aaPredicted RBP10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 SMAD2Q15796 467 aaKnown RBP10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 SLC9C2Q5TAH2 1124 aa10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 CNKSR3Q6P9H4 555 aa10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 EEPD1Q7L9B9 569 aa10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 TMCO2Q7Z6W1 182 aaPredicted RBP10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 FBXL6Q8N531 539 aa10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 AFAP1L1Q8TED9 768 aa10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 SDR42E1Q8WUS8 393 aa10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 SAMD11Q96NU1 681 aa10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 NUP88Q99567 741 aaPredicted RBP10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 ANTXR1Q9H6X2 564 aa10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 ACAD9Q9H845 621 aa10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 ATP8A2Q9NTI2 1148 aa10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 FAM86C1Q9NVL1 165 aa10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 CLDND1Q9NY35 253 aa10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 FEM1BQ9UK73 627 aa10.86□□□□□ -0.67
VPS9D1-205ENST00000565452 ZNF318Q5VUA4 2279 aa10.85□□□□□ -0.67
VPS9D1-205ENST00000565452 PNMA6EA0A0J9YXQ4 647 aa10.85□□□□□ -0.67
VPS9D1-205ENST00000565452 ID4P47928 161 aa10.85□□□□□ -0.67
VPS9D1-205ENST00000565452 DEFB103AP81534 67 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms