RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 UBA5Q9GZZ9 404 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 RANBP17Q9H2T7 1088 aaKnown RBP7.53□□□□□ -1.2
TCF4-228ENST00000565393 KAT14Q9H8E8 782 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 VAT1LQ9HCJ6 419 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 PDLIM7Q9NR12 457 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 PDGFCQ9NRA1 345 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 ADD3Q9UEY8 706 aaKnown RBP7.53□□□□□ -1.2
TCF4-228ENST00000565393 PNMA2Q9UL42 364 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 DDX49Q9Y6V7 483 aaKnown RBP7.53□□□□□ -1.2
TCF4-228ENST00000565393 KIAA0100Q14667 2235 aaKnown RBP7.53□□□□□ -1.2
TCF4-228ENST00000565393 PLIN4Q96Q06 1357 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 NAV1Q8NEY1 1877 aa7.53□□□□□ -1.2
TCF4-228ENST00000565393 ELP1O95163 1332 aa7.52□□□□□ -1.2
TCF4-228ENST00000565393 B4DLN1 442 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 B4E1Z4 1266 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 ARVCFO00192 962 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 KIAA0355O15063 1070 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 TLR3O15455 904 aaKnown RBP7.52□□□□□ -1.21
TCF4-228ENST00000565393 DHX16O60231 1041 aaKnown RBP7.52□□□□□ -1.21
TCF4-228ENST00000565393 SMPD1P17405 629 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 ITGB8P26012 769 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 MRPL12P52815 198 aaKnown RBP7.52□□□□□ -1.21
TCF4-228ENST00000565393 FPGSQ05932 587 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 ZNF543Q08ER8 600 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 USH1GQ495M9 461 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 C9orf50Q5SZB4 431 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 CCSAPQ6IQ19 270 aaPredicted RBP7.52□□□□□ -1.21
TCF4-228ENST00000565393 CXCL17Q6UXB2 119 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 RNF207Q6ZRF8 634 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.52□□□□□ -1.21
TCF4-228ENST00000565393 ANKRD33Q7Z3H0 272 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 TBC1D10CQ8IV04 446 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 FGD4Q96M96 766 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 TOX2Q96NM4 488 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 MPHOSPH6Q99547 160 aaKnown RBP7.52□□□□□ -1.21
TCF4-228ENST00000565393 KRT23Q9C075 422 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 GPHNQ9NQX3 736 aaPredicted RBP7.52□□□□□ -1.21
TCF4-228ENST00000565393 MTMR10Q9NXD2 777 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 ZSWIM5Q9P217 1185 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 ZMYM6O95789 1325 aa7.52□□□□□ -1.21
TCF4-228ENST00000565393 TNRC18O15417 2968 aaPredicted RBP7.51□□□□□ -1.21
TCF4-228ENST00000565393 A0A0U1RQG5 324 aaPredicted RBP7.51□□□□□ -1.21
TCF4-228ENST00000565393 NFIBO00712 420 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 ADCY6O43306 1168 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 TIMP1P01033 207 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 CST5P28325 142 aaPredicted RBP7.51□□□□□ -1.21
TCF4-228ENST00000565393 CDK7P50613 346 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 PDE4DQ08499 809 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 TRDNQ13061 729 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 TMEM63BQ5T3F8 832 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 GPATCH4Q5T3I0 446 aaKnown RBP7.51□□□□□ -1.21
TCF4-228ENST00000565393 TAPT1Q6NXT6 567 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 TLK2Q86UE8 772 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 FBXO16Q8IX29 292 aaPredicted RBP7.51□□□□□ -1.21
TCF4-228ENST00000565393 TMEM199Q8N511 208 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 PNMA1Q8ND90 353 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 RUFY2Q8WXA3 655 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 RNPC3Q96LT9 517 aaKnown RBP7.51□□□□□ -1.21
TCF4-228ENST00000565393 UBAC1Q9BSL1 405 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 DSCC1Q9BVC3 393 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 WDR11Q9BZH6 1224 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 UPF3AQ9H1J1 476 aaKnown RBP7.51□□□□□ -1.21
TCF4-228ENST00000565393 CPVLQ9H3G5 476 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 CNNM2Q9H8M5 875 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 Q9Y3F1 56 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 NEDD4P46934 1319 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 MROH7Q68CQ1 1323 aa7.51□□□□□ -1.21
TCF4-228ENST00000565393 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.5□□□□□ -1.21
TCF4-228ENST00000565393 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.5□□□□□ -1.21
TCF4-228ENST00000565393 CTAGE5O15320 804 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 CABYRO75952 493 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 MYL3P08590 195 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 PARP1P09874 1014 aaKnown RBP7.5□□□□□ -1.21
TCF4-228ENST00000565393 CSF2RAP15509 400 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 PTGS1P23219 599 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 PDE4AP27815 886 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 NT5C2P49902 561 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 ALDH5A1P51649 535 aaPredicted RBP7.5□□□□□ -1.21
TCF4-228ENST00000565393 EPHB4P54760 987 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 CHMP4BP1P59074 171 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 PSMC6P62333 389 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 ITGA7Q13683 1181 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 FSCN1Q16658 493 aaKnown RBP7.5□□□□□ -1.21
TCF4-228ENST00000565393 IFIT1BQ5T764 474 aaKnown RBP7.5□□□□□ -1.21
TCF4-228ENST00000565393 ZNF697Q5TEC3 545 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 FAM109BQ6ICB4 259 aaPredicted RBP7.5□□□□□ -1.21
TCF4-228ENST00000565393 MFSD5Q6N075 450 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 SLC30A10Q6XR72 485 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 ADGRF4Q8IZF3 695 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 CLEC4DQ8WXI8 215 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 ANKS1AQ92625 1134 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 PPP1R12CQ9BZL4 782 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 KATNBL1Q9H079 304 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 SEMA6BQ9H3T3 888 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 VTA1Q9NP79 307 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 GNEQ9Y223 722 aaKnown RBP7.5□□□□□ -1.21
TCF4-228ENST00000565393 STXBP5LQ9Y2K9 1186 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 PDE4DIPQ5VU43 2346 aa7.5□□□□□ -1.21
TCF4-228ENST00000565393 DOCK3Q8IZD9 2030 aa7.49□□□□□ -1.21
TCF4-228ENST00000565393 BAZ2AQ9UIF9 1905 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms