RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 CCDC89Q8N998 374 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 TMEM87AQ8NBN3 555 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 IP6K1Q92551 441 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 SYAP1Q96A49 352 aaPredicted RBP5.92□□□□□ -1.46
CAPN3-214ENST00000565274 MPHOSPH6Q99547 160 aaKnown RBP5.92□□□□□ -1.46
CAPN3-214ENST00000565274 COMMD8Q9NX08 183 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 MKS1Q9NXB0 559 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 POLG2Q9UHN1 485 aa5.92□□□□□ -1.46
CAPN3-214ENST00000565274 CEP170BQ9Y4F5 1589 aaPredicted RBP5.92□□□□□ -1.46
CAPN3-214ENST00000565274 PHRF1Q9P1Y6 1649 aaKnown RBP5.92□□□□□ -1.46
CAPN3-214ENST00000565274 PRSS47A8MTI9 375 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 M0R2N6 131 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 FOXO3O43524 673 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 XBP1P17861 261 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 RASA1P20936 1047 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 HSD3B2P26439 372 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 ALDH1B1P30837 517 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 HSPA4P34932 840 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 GNALP38405 381 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 PIK3CAP42336 1068 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 AMPHP49418 695 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 ZNF131P52739 623 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 FAM160A1Q05DH4 1040 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 PKP1Q13835 747 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 HIF1AQ16665 826 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 ZSCAN26Q16670 478 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 CTR9Q6PD62 1173 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 KCNV1Q6PIU1 500 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 POTEAQ6S8J7 498 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 RAVER1Q8IY67 606 aaKnown RBP5.91□□□□□ -1.46
CAPN3-214ENST00000565274 SAMD14Q8IZD0 417 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-214ENST00000565274 MYRIPQ8NFW9 859 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 TDRD7Q8NHU6 1098 aaKnown RBP5.91□□□□□ -1.46
CAPN3-214ENST00000565274 UHMK1Q8TAS1 419 aaKnown RBP5.91□□□□□ -1.46
CAPN3-214ENST00000565274 C17orf50Q8WW18 174 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 WFDC12Q8WWY7 111 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 PPM1EQ8WY54 764 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 JARID2Q92833 1246 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-214ENST00000565274 VMP1Q96GC9 406 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 TMX3Q96JJ7 454 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 PRIMPOLQ96LW4 560 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 MAP3K14Q99558 947 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 HINFPQ9BQA5 517 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 TINF2Q9BSI4 451 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 C2orf49Q9BVC5 232 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-214ENST00000565274 TM6SF1Q9BZW5 370 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 DHX36Q9H2U1 1008 aaKnown RBP5.91□□□□□ -1.46
CAPN3-214ENST00000565274 TSPY26PQ9H489 355 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 KMT5AQ9NQR1 393 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 DCAF16Q9NXF7 216 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 RABL2AQ9UBK7 228 aaPredicted RBP5.91□□□□□ -1.46
CAPN3-214ENST00000565274 TTC41PQ6P2S7 1318 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 RAD50Q92878 1312 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 PIK3C2AO00443 1686 aa5.91□□□□□ -1.46
CAPN3-214ENST00000565274 PNMA6EA0A0J9YXQ4 647 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 SYCE3A1L190 88 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 PRPF40AO75400 957 aaKnown RBP5.9□□□□□ -1.46
CAPN3-214ENST00000565274 ALDH1L1O75891 902 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 FOSP01100 380 aaPredicted RBP5.9□□□□□ -1.46
CAPN3-214ENST00000565274 PDGFRBP09619 1106 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 SRGNP10124 158 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 RFX1P22670 979 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 HOXA10P31260 410 aaPredicted RBP5.9□□□□□ -1.46
CAPN3-214ENST00000565274 GTF2F1P35269 517 aaKnown RBP eCLIP5.9□□□□□ -1.46
CAPN3-214ENST00000565274 EIF4A1P60842 406 aaKnown RBP5.9□□□□□ -1.46
CAPN3-214ENST00000565274 AMPD3Q01432 767 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 PLAURQ03405 335 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 VPS72Q15906 364 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 DDB1Q16531 1140 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 SYCP2LQ5T4T6 812 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 C9orf131Q5VYM1 1079 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 CCSAPQ6IQ19 270 aaPredicted RBP5.9□□□□□ -1.46
CAPN3-214ENST00000565274 ZCCHC8Q6NZY4 707 aaKnown RBP5.9□□□□□ -1.46
CAPN3-214ENST00000565274 SIX5Q8N196 739 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 ZGPATQ8N5A5 531 aaKnown RBP5.9□□□□□ -1.46
CAPN3-214ENST00000565274 FAM184AQ8NB25 1140 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 APPL2Q8NEU8 664 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 GLMNQ92990 594 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 TBC1D20Q96BZ9 403 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 KIF1BPQ96EK5 621 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 MPP4Q96JB8 637 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 APBA2Q99767 749 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 TMOD4Q9NZQ9 345 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 PRKAG2Q9UGJ0 569 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 USP25Q9UHP3 1055 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 ITM2BQ9Y287 266 aa5.9□□□□□ -1.46
CAPN3-214ENST00000565274 UTYO14607 1347 aa5.9□□□□□ -1.47
CAPN3-214ENST00000565274 FMN2Q9NZ56 1722 aa5.9□□□□□ -1.47
CAPN3-214ENST00000565274 AK9Q5TCS8 1911 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 FAM208AQ9UK61 1670 aaKnown RBP5.89□□□□□ -1.47
CAPN3-214ENST00000565274 MARF1Q9Y4F3 1742 aaKnown RBP5.89□□□□□ -1.47
CAPN3-214ENST00000565274 CCDC196A0A1B0GTZ2 297 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 F6X3S4 739 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 TBX3O15119 743 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 SGSM2O43147 1006 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 RPN1P04843 607 aaKnown RBP5.89□□□□□ -1.47
CAPN3-214ENST00000565274 UBTFL1P0CB47 393 aaPredicted RBP5.89□□□□□ -1.47
CAPN3-214ENST00000565274 NOS3P29474 1203 aa5.89□□□□□ -1.47
CAPN3-214ENST00000565274 NOP2P46087 812 aaKnown RBP5.89□□□□□ -1.47
CAPN3-214ENST00000565274 NEK4P51957 841 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms