RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 CLK2P49760 499 aaKnown RBP8.62□□□□□ -1.03
GINS3-205ENST00000564814 ZNF157P51786 506 aaPredicted RBP8.62□□□□□ -1.03
GINS3-205ENST00000564814 HERVK_113P62684 666 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 SREBF2Q12772 1141 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 ZYXQ15942 572 aaKnown RBP8.62□□□□□ -1.03
GINS3-205ENST00000564814 CCL15Q16663 113 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 TREML2Q5T2D2 321 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 KRT40Q6A162 431 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 TYW1BQ6NUM6 668 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 FBXO11Q86XK2 927 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 CMTR1Q8N1G2 835 aaKnown RBP8.62□□□□□ -1.03
GINS3-205ENST00000564814 SHCBP1Q8NEM2 672 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 BICD2Q8TD16 824 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 TNFRSF25Q93038 417 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 TEX13BQ9BXU2 312 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 TANGO6Q9C0B7 1094 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 ASCC2Q9H1I8 757 aaPredicted RBP8.62□□□□□ -1.03
GINS3-205ENST00000564814 FBXO28Q9NVF7 368 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 MORF4L1Q9UBU8 362 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 ZDHHC9Q9Y397 364 aa8.62□□□□□ -1.03
GINS3-205ENST00000564814 LOC102724159A0A0B4J2E5 919 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 OPLAHO14841 1288 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 ZBED4O75132 1171 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 SLC25A27O95847 323 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 ALDH1A1P00352 501 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 TRAPPC10P48553 1259 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 SLC4A3P48751 1232 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 IRX3P78415 501 aaPredicted RBP8.61□□□□□ -1.03
GINS3-205ENST00000564814 KIF23Q02241 960 aaPredicted RBP8.61□□□□□ -1.03
GINS3-205ENST00000564814 AP3B2Q13367 1082 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 ORC2Q13416 577 aaPredicted RBP8.61□□□□□ -1.03
GINS3-205ENST00000564814 TRIM29Q14134 588 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 PWP2Q15269 919 aaKnown RBP8.61□□□□□ -1.03
GINS3-205ENST00000564814 POTEEQ6S8J3 1075 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 RIOX2Q8IUF8 465 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 CCDC82Q8N4S0 544 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 CHST13Q8NET6 341 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 ATG4CQ96DT6 458 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 DDX11Q96FC9 970 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 PARK7Q99497 189 aaKnown RBP8.61□□□□□ -1.03
GINS3-205ENST00000564814 PTPN18Q99952 460 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 CPVLQ9H3G5 476 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 BRMS1Q9HCU9 246 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 RIC8AQ9NPQ8 531 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 FBXO40Q9UH90 709 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 PCDHA4Q9UN74 947 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 MRPL11Q9Y3B7 192 aaKnown RBP8.61□□□□□ -1.03
GINS3-205ENST00000564814 ATP6V1DQ9Y5K8 247 aa8.61□□□□□ -1.03
GINS3-205ENST00000564814 FRMPD4Q14CM0 1322 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 F13A1P00488 732 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 FOSP01100 380 aaPredicted RBP8.6□□□□□ -1.03
GINS3-205ENST00000564814 HSD17B4P51659 736 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 MRPL12P52815 198 aaKnown RBP8.6□□□□□ -1.03
GINS3-205ENST00000564814 IKQ13123 557 aaPredicted RBP8.6□□□□□ -1.03
GINS3-205ENST00000564814 RESTQ13127 1097 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 DGKZQ13574 1117 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 PKP1Q13835 747 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 TMEM132BQ14DG7 1078 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 SAFBQ15424 915 aaKnown RBP eCLIP8.6□□□□□ -1.03
GINS3-205ENST00000564814 FAM110CQ1W6H9 321 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 NOM1Q5C9Z4 860 aaKnown RBP8.6□□□□□ -1.03
GINS3-205ENST00000564814 OTUD7BQ6GQQ9 843 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 MOXD1Q6UVY6 613 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 GADL1Q6ZQY3 521 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 HOMER1Q86YM7 354 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 BLIDQ8IZY5 108 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 CRYGNQ8WXF5 182 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 KIFC2Q96AC6 838 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 AIFM3Q96NN9 605 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 C6orf50Q9HD87 102 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 VPS54Q9P1Q0 977 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 MTMR7Q9Y216 660 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 PCDHA1Q9Y5I3 950 aa8.6□□□□□ -1.03
GINS3-205ENST00000564814 LCTP09848 1927 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 TCHHQ07283 1943 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 H3BQV1 296 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 PDHXO00330 501 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 IGF2BP3O00425 579 aaKnown RBP eCLIP8.59□□□□□ -1.03
GINS3-205ENST00000564814 MEIS2O14770 477 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 CA12O43570 354 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 RAD21O60216 631 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 CNMDO75829 334 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 BCRP11274 1271 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 KRT2P35908 639 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 STAT3P40763 770 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 NAPAP54920 295 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 HEATR3Q7Z4Q2 680 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 MCF2L2Q86YR7 1114 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 IFNL1Q8IU54 200 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 NOSTRINQ8IVI9 506 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 DIS3L2Q8IYB7 885 aaKnown RBP8.59□□□□□ -1.03
GINS3-205ENST00000564814 ABRAQ8N0Z2 381 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 FAM43AQ8N2R8 423 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 CLEC4DQ8WXI8 215 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 GPKOWQ92917 476 aaPredicted RBP eCLIP8.59□□□□□ -1.03
GINS3-205ENST00000564814 CUL5Q93034 780 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 P2RX7Q99572 595 aaKnown RBP8.59□□□□□ -1.03
GINS3-205ENST00000564814 MCOLN1Q9GZU1 580 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 SPATC1LQ9H0A9 340 aa8.59□□□□□ -1.03
GINS3-205ENST00000564814 RBPJLQ9UBG7 517 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms