RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 ZNF287Q9HBT7 754 aa17.14■□□□□ 0.33
HERC2-207ENST00000564734 REXO2Q9Y3B8 237 aaKnown RBP17.14■□□□□ 0.33
HERC2-207ENST00000564734 RHBDL3P58872 404 aa17.13■□□□□ 0.33
HERC2-207ENST00000564734 TRAPPC3LQ5T215 181 aa17.13■□□□□ 0.33
HERC2-207ENST00000564734 DNAJC7Q99615 494 aa17.13■□□□□ 0.33
HERC2-207ENST00000564734 TTC26A0AVF1 554 aa17.13■□□□□ 0.33
HERC2-207ENST00000564734 OR52Z1P0C646 297 aa17.13■□□□□ 0.33
HERC2-207ENST00000564734 CABP7Q86V35 215 aa17.13■□□□□ 0.33
HERC2-207ENST00000564734 CNBD1Q8NA66 436 aa17.13■□□□□ 0.33
HERC2-207ENST00000564734 FAM163AQ96GL9 167 aaPredicted RBP17.13■□□□□ 0.33
HERC2-207ENST00000564734 DHTKD1Q96HY7 919 aaPredicted RBP17.13■□□□□ 0.33
HERC2-207ENST00000564734 CHP1Q99653 195 aa17.13■□□□□ 0.33
HERC2-207ENST00000564734 MYO1AQ9UBC5 1043 aa17.13■□□□□ 0.33
HERC2-207ENST00000564734 MTMR7Q9Y216 660 aa17.13■□□□□ 0.33
HERC2-207ENST00000564734 PLCG1P19174 1290 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 CHMP4BP1P59074 171 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 NONOQ15233 471 aaKnown RBP eCLIP17.12■□□□□ 0.33
HERC2-207ENST00000564734 CEP112Q8N8E3 955 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 NOC3LQ8WTT2 800 aaKnown RBP17.12■□□□□ 0.33
HERC2-207ENST00000564734 BAG6P46379 1132 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 NAPAP54920 295 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 CRY2Q49AN0 593 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 PRR5LQ6MZQ0 368 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 C7orf25Q9BPX7 421 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 CAPN11Q9UMQ6 739 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 CTAGE9A4FU28 777 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 SMCO2A6NFE2 343 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 PSMA7O14818 248 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 USP17L2Q6R6M4 530 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 PROM2Q8N271 834 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 TRIM9Q9C026 710 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 ANKZF1Q9H8Y5 726 aa17.12■□□□□ 0.33
HERC2-207ENST00000564734 ATP2B4P23634 1241 aa17.11■□□□□ 0.33
HERC2-207ENST00000564734 ZNF771Q7L3S4 317 aaPredicted RBP17.11■□□□□ 0.33
HERC2-207ENST00000564734 CREBRFQ8IUR6 639 aa17.11■□□□□ 0.33
HERC2-207ENST00000564734 TEX11Q8IYF3 940 aa17.11■□□□□ 0.33
HERC2-207ENST00000564734 OR8K1Q8NGG5 319 aa17.11■□□□□ 0.33
HERC2-207ENST00000564734 RASSF8Q8NHQ8 419 aa17.11■□□□□ 0.33
HERC2-207ENST00000564734 SLF1Q9BQI6 1058 aa17.11■□□□□ 0.33
HERC2-207ENST00000564734 MMTAG2Q9BU76 263 aaKnown RBP17.11■□□□□ 0.33
HERC2-207ENST00000564734 C6orf50Q9HD87 102 aa17.11■□□□□ 0.33
HERC2-207ENST00000564734 EPN1Q9Y6I3 576 aaPredicted RBP17.11■□□□□ 0.33
HERC2-207ENST00000564734 RASSF10A6NK89 507 aa17.11■□□□□ 0.33
HERC2-207ENST00000564734 CCNT1O60563 726 aaKnown RBP17.11■□□□□ 0.33
HERC2-207ENST00000564734 SRGNP10124 158 aa17.11■□□□□ 0.33
HERC2-207ENST00000564734 STIM1Q13586 685 aa17.11■□□□□ 0.33
HERC2-207ENST00000564734 JAKMIP3Q5VZ66 844 aa17.11■□□□□ 0.33
HERC2-207ENST00000564734 WDR59Q6PJI9 974 aa17.11■□□□□ 0.33
HERC2-207ENST00000564734 RRP36Q96EU6 259 aaKnown RBP17.11■□□□□ 0.33
HERC2-207ENST00000564734 GAKO14976 1311 aa17.11■□□□□ 0.33
HERC2-207ENST00000564734 NDUFA10O95299 355 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 LETM2Q2VYF4 491 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 COBLL1Q53SF7 1204 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 NEK8Q86SG6 692 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 MSANTD4Q8NCY6 345 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 CEP95Q96GE4 821 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 FUT8Q9BYC5 575 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 TTYH3Q9C0H2 523 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 MYH8P13535 1937 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 ESYT2A0FGR8 921 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 UFL1O94874 794 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 GNA11P29992 359 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 AMPD2Q01433 879 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 ORC2Q13416 577 aaPredicted RBP17.1■□□□□ 0.33
HERC2-207ENST00000564734 KIF4BQ2VIQ3 1234 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 TRIM47Q96LD4 638 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 NAPGQ99747 312 aaPredicted RBP17.1■□□□□ 0.33
HERC2-207ENST00000564734 RIOX1Q9H6W3 641 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.1■□□□□ 0.33
HERC2-207ENST00000564734 PLCG2P16885 1265 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 CCNE1P24864 410 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 BRD3Q15059 726 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 P2RX5Q93086 422 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 PIGSQ96S52 555 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 PUF60Q9UHX1 559 aaKnown RBP17.1■□□□□ 0.33
HERC2-207ENST00000564734 RAB21Q9UL25 225 aa17.1■□□□□ 0.33
HERC2-207ENST00000564734 CCDC151A5D8V7 595 aa17.09■□□□□ 0.33
HERC2-207ENST00000564734 DNM2P50570 870 aa17.09■□□□□ 0.33
HERC2-207ENST00000564734 MEA1Q16626 185 aa17.09■□□□□ 0.33
HERC2-207ENST00000564734 ARFGAP3Q9NP61 516 aa17.09■□□□□ 0.33
HERC2-207ENST00000564734 LUC7L2Q9Y383 392 aaKnown RBP17.09■□□□□ 0.33
HERC2-207ENST00000564734 EDIL3O43854 480 aa17.09■□□□□ 0.33
HERC2-207ENST00000564734 STK4Q13043 487 aa17.09■□□□□ 0.33
HERC2-207ENST00000564734 ANKRD40Q6AI12 368 aa17.09■□□□□ 0.33
HERC2-207ENST00000564734 MTMR9Q96QG7 549 aa17.09■□□□□ 0.33
HERC2-207ENST00000564734 ZSWIM4Q9H7M6 989 aa17.09■□□□□ 0.33
HERC2-207ENST00000564734 TUBB4BP68371 445 aa17.08■□□□□ 0.33
HERC2-207ENST00000564734 ZNF662Q6ZS27 426 aa17.08■□□□□ 0.33
HERC2-207ENST00000564734 TBCKQ8TEA7 893 aa17.08■□□□□ 0.33
HERC2-207ENST00000564734 HNRNPLLQ8WVV9 542 aaKnown RBP17.08■□□□□ 0.33
HERC2-207ENST00000564734 RPGRQ92834 1020 aaKnown RBP17.08■□□□□ 0.33
HERC2-207ENST00000564734 PODXL2Q9NZ53 605 aa17.08■□□□□ 0.33
HERC2-207ENST00000564734 GGA1Q9UJY5 639 aa17.08■□□□□ 0.33
HERC2-207ENST00000564734 MYH1P12882 1939 aa17.08■□□□□ 0.33
HERC2-207ENST00000564734 PLIN4Q96Q06 1357 aa17.08■□□□□ 0.33
HERC2-207ENST00000564734 USP17L5A8MUK1 530 aa17.08■□□□□ 0.32
HERC2-207ENST00000564734 HERVK_113P62684 666 aa17.08■□□□□ 0.32
HERC2-207ENST00000564734 WHAMMP3Q1A5X7 153 aa17.08■□□□□ 0.32
HERC2-207ENST00000564734 CSGALNACT2Q8N6G5 542 aa17.08■□□□□ 0.32
HERC2-207ENST00000564734 TUBGCP2Q9BSJ2 902 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms