RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 CFAP99D6REC4 459 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 C6orf229H3BNL8 230 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 BIN1O00499 593 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 PPEF1O14829 653 aaPredicted RBP8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 CBFA2T2O43439 604 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 PDE6BP35913 854 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 NOVP48745 357 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 CDK8P49336 464 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 RHBDL3P58872 404 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 ATP2C1P98194 919 aaPredicted RBP8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 TTC38Q5R3I4 469 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 ARL6IP4Q66PJ3 421 aaKnown RBP8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 CCDC148Q8NFR7 591 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 DYNLL2Q96FJ2 89 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 CSRNP2Q9H175 543 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 MAD2L2Q9UI95 211 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 BRWD3Q6RI45 1802 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 NAV1Q8NEY1 1877 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 A0A087WWV3 80 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 ACTN4O43707 911 aaKnown RBP8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 SMC2O95347 1197 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 SLFN14P0C7P3 912 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 SRGNP10124 158 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 GRIN1Q05586 938 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 BMS1Q14692 1282 aaKnown RBP8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 MAPKAPK5Q8IW41 473 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 BLIDQ8IZY5 108 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 TTC13Q8NBP0 860 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 DAGLBQ8NCG7 672 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 SLAIN1Q8ND83 568 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 CACTINQ8WUQ7 758 aaKnown RBP8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 PMM1Q92871 262 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 SMARCE1Q969G3 411 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 GPR101Q96P66 508 aaPredicted RBP8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 TMEM47Q9BQJ4 181 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 SPZ1Q9BXG8 430 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 ZC3H12CQ9C0D7 883 aaKnown RBP8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 TMX4Q9H1E5 349 aaPredicted RBP8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 ANO8Q9HCE9 1232 aaPredicted RBP8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 KCND1Q9NSA2 647 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 SERTAD1Q9UHV2 236 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 PCDHA4Q9UN74 947 aa8.24□□□□□ -1.09
HERPUD1-209ENST00000564678 LTBP1Q14766 1721 aa8.23□□□□□ -1.09
HERPUD1-209ENST00000564678 CDK5RAP2Q96SN8 1893 aa8.23□□□□□ -1.09
HERPUD1-209ENST00000564678 hCG_1642624A0A1W2PR95 340 aa8.23□□□□□ -1.09
HERPUD1-209ENST00000564678 RCCD1A6NED2 376 aa8.23□□□□□ -1.09
HERPUD1-209ENST00000564678 NCOA4Q13772 614 aa8.23□□□□□ -1.09
HERPUD1-209ENST00000564678 EARS2Q5JPH6 523 aaKnown RBP8.23□□□□□ -1.09
HERPUD1-209ENST00000564678 SPECC1Q5M775 1068 aa8.23□□□□□ -1.09
HERPUD1-209ENST00000564678 SH3RF1Q7Z6J0 888 aa8.23□□□□□ -1.09
HERPUD1-209ENST00000564678 ENOX1Q8TC92 643 aaKnown RBP8.23□□□□□ -1.09
HERPUD1-209ENST00000564678 CCDC12Q8WUD4 166 aaPredicted RBP8.23□□□□□ -1.09
HERPUD1-209ENST00000564678 EYA3Q99504 573 aa8.23□□□□□ -1.09
HERPUD1-209ENST00000564678 BAZ2BQ9UIF8 2168 aaKnown RBP8.23□□□□□ -1.09
HERPUD1-209ENST00000564678 FLT1P17948 1338 aa8.23□□□□□ -1.09
HERPUD1-209ENST00000564678 NRXN2Q9P2S2 1712 aa8.23□□□□□ -1.09
HERPUD1-209ENST00000564678 M0R2N6 131 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 DYNC1I1O14576 645 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 NRDCO43847 1150 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 LGR5O75473 907 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 TOP1P11387 765 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 GTF2IP78347 998 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 KCNH2Q12809 1159 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 DPYDQ12882 1025 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 MORC3Q14149 939 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 CCDC181Q5TID7 509 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 ANKMY2Q8IV38 441 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 STAG2Q8N3U4 1231 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 PDCD7Q8N8D1 485 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 MORC4Q8TE76 937 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 SGSM3Q96HU1 749 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 GSDMAQ96QA5 445 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 MRIQ9BWK5 157 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 XPO4Q9C0E2 1151 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 CCSER2Q9H7U1 834 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 PRDM10Q9NQV6 1147 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 BARHL2Q9NY43 387 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 IFNKQ9P0W0 207 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 MAN1B1Q9UKM7 699 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 STX8Q9UNK0 236 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 MYH1P12882 1939 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 PLIN4Q96Q06 1357 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 MYO3BQ8WXR4 1341 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 FAM205CA6NFA0 338 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 hCG_1984214I3L0E3 225 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 LAD1O00515 517 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 LZTS3O60299 673 aaPredicted RBP8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 LONP1P36776 959 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 KCNJ6P48051 423 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 LRMPQ12912 555 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 ZNF174Q15697 407 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 ZNF772Q68DY9 489 aaPredicted RBP8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 ZNF746Q6NUN9 644 aaPredicted RBP8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 HHIPL2Q6UWX4 724 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 PIK3AP1Q6ZUJ8 805 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 FILIP1Q7Z7B0 1213 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 RPUSD2Q8IZ73 545 aaKnown RBP8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 ZNF713Q8N859 430 aaPredicted RBP8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 IQUBQ8NA54 791 aa8.22□□□□□ -1.09
HERPUD1-209ENST00000564678 CCDC150Q8NCX0 1101 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms