RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 LY9Q9HBG7 655 aa11.58□□□□□ -0.56
CDH1-206ENST00000564676 A1CFQ9NQ94 594 aaKnown RBP11.58□□□□□ -0.56
CDH1-206ENST00000564676 GPHNQ9NQX3 736 aaPredicted RBP11.58□□□□□ -0.56
CDH1-206ENST00000564676 WDR19Q8NEZ3 1342 aa11.58□□□□□ -0.56
CDH1-206ENST00000564676 PLXNA1Q9UIW2 1896 aa11.57□□□□□ -0.56
CDH1-206ENST00000564676 BAZ2BQ9UIF8 2168 aaKnown RBP11.57□□□□□ -0.56
CDH1-206ENST00000564676 PALM3A6NDB9 673 aaPredicted RBP11.57□□□□□ -0.56
CDH1-206ENST00000564676 SH2B2O14492 632 aaPredicted RBP11.57□□□□□ -0.56
CDH1-206ENST00000564676 MSCO60682 206 aa11.57□□□□□ -0.56
CDH1-206ENST00000564676 IGHA2P01877 340 aa11.57□□□□□ -0.56
CDH1-206ENST00000564676 CYBAP13498 195 aa11.57□□□□□ -0.56
CDH1-206ENST00000564676 HSPA4P34932 840 aa11.57□□□□□ -0.56
CDH1-206ENST00000564676 CNTN2Q02246 1040 aa11.57□□□□□ -0.56
CDH1-206ENST00000564676 TROAPQ12815 778 aa11.57□□□□□ -0.56
CDH1-206ENST00000564676 USH1GQ495M9 461 aa11.57□□□□□ -0.56
CDH1-206ENST00000564676 DHX32Q7L7V1 743 aaKnown RBP11.57□□□□□ -0.56
CDH1-206ENST00000564676 ZNF654Q8IZM8 581 aa11.57□□□□□ -0.56
CDH1-206ENST00000564676 MSL3Q8N5Y2 521 aaKnown RBP11.57□□□□□ -0.56
CDH1-206ENST00000564676 TRPV1Q8NER1 839 aa11.57□□□□□ -0.56
CDH1-206ENST00000564676 CTCFLQ8NI51 663 aaPredicted RBP11.57□□□□□ -0.56
CDH1-206ENST00000564676 JMJD4Q9H9V9 463 aa11.57□□□□□ -0.56
CDH1-206ENST00000564676 DDX20Q9UHI6 824 aaKnown RBP11.57□□□□□ -0.56
CDH1-206ENST00000564676 MAD2L2Q9UI95 211 aa11.57□□□□□ -0.56
CDH1-206ENST00000564676 CNPY2Q9Y2B0 182 aa11.57□□□□□ -0.56
CDH1-206ENST00000564676 PFASO15067 1338 aa11.57□□□□□ -0.56
CDH1-206ENST00000564676 PTPDC1A2A3K4 754 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 NFIBO00712 420 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 DDAH1O94760 285 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 HMGB1P09429 215 aaKnown RBP11.56□□□□□ -0.56
CDH1-206ENST00000564676 KIF5BP33176 963 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 LIFRP42702 1097 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 FGD1P98174 961 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 BAATQ14032 418 aaPredicted RBP11.56□□□□□ -0.56
CDH1-206ENST00000564676 COL9A3Q14050 684 aaPredicted RBP11.56□□□□□ -0.56
CDH1-206ENST00000564676 QRICH1Q2TAL8 776 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 ADCK5Q3MIX3 580 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 SYNE3Q6ZMZ3 975 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 ZNF467Q7Z7K2 595 aaPredicted RBP11.56□□□□□ -0.56
CDH1-206ENST00000564676 FAM133AQ8N9E0 248 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 KCNB2Q92953 911 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 TCEANC2Q96MN5 208 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 JAKMIP1Q96N16 626 aaKnown RBP11.56□□□□□ -0.56
CDH1-206ENST00000564676 MYL10Q9BUA6 226 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 CYP39A1Q9NYL5 469 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 NRBP1Q9UHY1 535 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 OGDHLQ9ULD0 1010 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 SLC12A7Q9Y666 1083 aa11.56□□□□□ -0.56
CDH1-206ENST00000564676 MYH6P13533 1939 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 ASB14A6NK59 587 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 SEPT4O43236 478 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 SNAI1O95863 264 aaPredicted RBP11.55□□□□□ -0.56
CDH1-206ENST00000564676 CALM1P0DP23 149 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 CALM2P0DP24 149 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 CALM3P0DP25 149 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 CALML3P27482 149 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 GNAQP50148 359 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 EXOSC10Q01780 885 aaKnown RBP11.55□□□□□ -0.56
CDH1-206ENST00000564676 ANO1Q5XXA6 986 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 LHX8Q68G74 356 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 MAMDC4Q6UXC1 1216 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 RNF207Q6ZRF8 634 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 NECAB2Q7Z6G3 386 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 FBXO11Q86XK2 927 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 HOMER1Q86YM7 354 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 ANKLE1Q8NAG6 615 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 CLEC4DQ8WXI8 215 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 FGD4Q96M96 766 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 MAP3K14Q99558 947 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 AMNQ9BXJ7 453 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.55□□□□□ -0.56
CDH1-206ENST00000564676 ZHX1Q9UKY1 873 aaPredicted RBP11.55□□□□□ -0.56
CDH1-206ENST00000564676 MRPL11Q9Y3B7 192 aaKnown RBP11.55□□□□□ -0.56
CDH1-206ENST00000564676 SNX14Q9Y5W7 946 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 PDE4DIPQ5VU43 2346 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 ABCB11O95342 1321 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 SYNGAP1Q96PV0 1343 aa11.55□□□□□ -0.56
CDH1-206ENST00000564676 MCM3APO60318 1980 aa11.54□□□□□ -0.56
CDH1-206ENST00000564676 SOWAHBA6NEL2 793 aa11.54□□□□□ -0.56
CDH1-206ENST00000564676 ZBTB5O15062 677 aa11.54□□□□□ -0.56
CDH1-206ENST00000564676 EPB41L2O43491 1005 aaKnown RBP11.54□□□□□ -0.56
CDH1-206ENST00000564676 RXRAP19793 462 aa11.54□□□□□ -0.56
CDH1-206ENST00000564676 PSMA5P28066 241 aa11.54□□□□□ -0.56
CDH1-206ENST00000564676 RPS6P62753 249 aaKnown RBP11.54□□□□□ -0.56
CDH1-206ENST00000564676 BLOC1S2Q6QNY1 142 aa11.54□□□□□ -0.56
CDH1-206ENST00000564676 ARMCX2Q7L311 632 aa11.54□□□□□ -0.56
CDH1-206ENST00000564676 RAB11FIP4Q86YS3 637 aa11.54□□□□□ -0.56
CDH1-206ENST00000564676 CCDC144CPQ8IYA2 1237 aa11.54□□□□□ -0.56
CDH1-206ENST00000564676 DIS3LQ8TF46 1054 aaKnown RBP11.54□□□□□ -0.56
CDH1-206ENST00000564676 PIBF1Q8WXW3 757 aa11.54□□□□□ -0.56
CDH1-206ENST00000564676 MTMR8Q96EF0 704 aa11.54□□□□□ -0.56
CDH1-206ENST00000564676 PAWRQ96IZ0 340 aaKnown RBP11.54□□□□□ -0.56
CDH1-206ENST00000564676 PURBQ96QR8 312 aaKnown RBP11.54□□□□□ -0.56
CDH1-206ENST00000564676 PIGSQ96S52 555 aa11.54□□□□□ -0.56
CDH1-206ENST00000564676 LZTS2Q9BRK4 669 aa11.54□□□□□ -0.56
CDH1-206ENST00000564676 USP26Q9BXU7 913 aa11.54□□□□□ -0.56
CDH1-206ENST00000564676 RIOX1Q9H6W3 641 aa11.54□□□□□ -0.56
CDH1-206ENST00000564676 ADD3Q9UEY8 706 aaKnown RBP11.54□□□□□ -0.56
CDH1-206ENST00000564676 CYTH3O43739 400 aa11.53□□□□□ -0.56
CDH1-206ENST00000564676 ZNF865P0CJ78 1059 aaPredicted RBP11.53□□□□□ -0.56
CDH1-206ENST00000564676 RARBP10826 455 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms