RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 QRICH1Q2TAL8 776 aa20.14■□□□□ 0.81
USB1-209ENST00000564387 APOA5Q6Q788 366 aa20.14■□□□□ 0.81
USB1-209ENST00000564387 BLOC1S2Q6QNY1 142 aa20.14■□□□□ 0.81
USB1-209ENST00000564387 NFXL1Q6ZNB6 911 aa20.14■□□□□ 0.81
USB1-209ENST00000564387 TCEANC2Q96MN5 208 aa20.14■□□□□ 0.81
USB1-209ENST00000564387 MYL10Q9BUA6 226 aa20.14■□□□□ 0.81
USB1-209ENST00000564387 SPZ1Q9BXG8 430 aa20.14■□□□□ 0.81
USB1-209ENST00000564387 CRISPLD2Q9H0B8 497 aa20.14■□□□□ 0.81
USB1-209ENST00000564387 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.14■□□□□ 0.81
USB1-209ENST00000564387 HMX1Q9NP08 348 aaPredicted RBP20.14■□□□□ 0.81
USB1-209ENST00000564387 CYP39A1Q9NYL5 469 aa20.14■□□□□ 0.81
USB1-209ENST00000564387 NRBP1Q9UHY1 535 aa20.14■□□□□ 0.81
USB1-209ENST00000564387 SLC12A7Q9Y666 1083 aa20.14■□□□□ 0.81
USB1-209ENST00000564387 ZBTB5O15062 677 aa20.13■□□□□ 0.81
USB1-209ENST00000564387 SGPL1O95470 568 aa20.13■□□□□ 0.81
USB1-209ENST00000564387 MYCP01106 439 aaPredicted RBP20.13■□□□□ 0.81
USB1-209ENST00000564387 CYBAP13498 195 aa20.13■□□□□ 0.81
USB1-209ENST00000564387 CPA1P15085 419 aa20.13■□□□□ 0.81
USB1-209ENST00000564387 TAL1P17542 331 aaPredicted RBP20.13■□□□□ 0.81
USB1-209ENST00000564387 CYP2C19P33261 490 aa20.13■□□□□ 0.81
USB1-209ENST00000564387 EVCP57679 992 aa20.13■□□□□ 0.81
USB1-209ENST00000564387 FANCBQ8NB91 859 aa20.13■□□□□ 0.81
USB1-209ENST00000564387 NUP133Q8WUM0 1156 aa20.13■□□□□ 0.81
USB1-209ENST00000564387 LZTS2Q9BRK4 669 aa20.13■□□□□ 0.81
USB1-209ENST00000564387 TINF2Q9BSI4 451 aa20.13■□□□□ 0.81
USB1-209ENST00000564387 BRPF3Q9ULD4 1205 aa20.13■□□□□ 0.81
USB1-209ENST00000564387 ABCB11O95342 1321 aa20.12■□□□□ 0.81
USB1-209ENST00000564387 SYNGAP1Q96PV0 1343 aa20.12■□□□□ 0.81
USB1-209ENST00000564387 NFIBO00712 420 aa20.12■□□□□ 0.81
USB1-209ENST00000564387 PPP1R11O60927 126 aaPredicted RBP20.12■□□□□ 0.81
USB1-209ENST00000564387 EN2P19622 333 aaPredicted RBP20.12■□□□□ 0.81
USB1-209ENST00000564387 GNAQP50148 359 aa20.12■□□□□ 0.81
USB1-209ENST00000564387 ANAPC15P60006 121 aa20.12■□□□□ 0.81
USB1-209ENST00000564387 C8orf34Q49A92 452 aa20.12■□□□□ 0.81
USB1-209ENST00000564387 RUFY3Q7L099 469 aa20.12■□□□□ 0.81
USB1-209ENST00000564387 TRPV1Q8NER1 839 aa20.12■□□□□ 0.81
USB1-209ENST00000564387 CTCFLQ8NI51 663 aaPredicted RBP20.12■□□□□ 0.81
USB1-209ENST00000564387 U2AF1L4Q8WU68 220 aaKnown RBP20.12■□□□□ 0.81
USB1-209ENST00000564387 SHISA4Q96DD7 197 aa20.12■□□□□ 0.81
USB1-209ENST00000564387 VAT1LQ9HCJ6 419 aa20.12■□□□□ 0.81
USB1-209ENST00000564387 MKI67P46013 3256 aaKnown RBP20.11■□□□□ 0.81
USB1-209ENST00000564387 SEC24BO95487 1268 aa20.11■□□□□ 0.81
USB1-209ENST00000564387 CASTP20810 708 aaKnown RBP20.11■□□□□ 0.81
USB1-209ENST00000564387 GHRHRQ02643 423 aa20.11■□□□□ 0.81
USB1-209ENST00000564387 FBXO11Q86XK2 927 aa20.11■□□□□ 0.81
USB1-209ENST00000564387 AMNQ9BXJ7 453 aa20.11■□□□□ 0.81
USB1-209ENST00000564387 LCTP09848 1927 aa20.11■□□□□ 0.81
USB1-209ENST00000564387 ASTN1O14525 1302 aa20.1■□□□□ 0.81
USB1-209ENST00000564387 PNMA6FA0A0J9YX94 578 aa20.1■□□□□ 0.81
USB1-209ENST00000564387 SOWAHBA6NEL2 793 aa20.1■□□□□ 0.81
USB1-209ENST00000564387 POTEB2H3BUK9 544 aa20.1■□□□□ 0.81
USB1-209ENST00000564387 CCND3P30281 292 aaPredicted RBP20.1■□□□□ 0.81
USB1-209ENST00000564387 CNTN2Q02246 1040 aa20.1■□□□□ 0.81
USB1-209ENST00000564387 LHX8Q68G74 356 aa20.1■□□□□ 0.81
USB1-209ENST00000564387 Q6ZUG5 572 aa20.1■□□□□ 0.81
USB1-209ENST00000564387 UBE2Q1Q7Z7E8 422 aa20.1■□□□□ 0.81
USB1-209ENST00000564387 SRBD1Q8N5C6 995 aaKnown RBP20.1■□□□□ 0.81
USB1-209ENST00000564387 DEFB118Q96PH6 123 aa20.1■□□□□ 0.81
USB1-209ENST00000564387 PIGSQ96S52 555 aa20.1■□□□□ 0.81
USB1-209ENST00000564387 MYH6P13533 1939 aa20.1■□□□□ 0.81
USB1-209ENST00000564387 NID2Q14112 1375 aa20.09■□□□□ 0.81
USB1-209ENST00000564387 LOC102724159A0A0B4J2E5 919 aa20.09■□□□□ 0.81
USB1-209ENST00000564387 OPLAHO14841 1288 aa20.09■□□□□ 0.81
USB1-209ENST00000564387 DHX16O60231 1041 aaKnown RBP20.09■□□□□ 0.81
USB1-209ENST00000564387 PLEKHA8P1O95397 391 aa20.09■□□□□ 0.81
USB1-209ENST00000564387 SNAI1O95863 264 aaPredicted RBP20.09■□□□□ 0.81
USB1-209ENST00000564387 RXRAP19793 462 aa20.09■□□□□ 0.81
USB1-209ENST00000564387 FUT2Q10981 343 aa20.09■□□□□ 0.81
USB1-209ENST00000564387 TRAF1Q13077 416 aa20.09■□□□□ 0.81
USB1-209ENST00000564387 BAATQ14032 418 aaPredicted RBP20.09■□□□□ 0.81
USB1-209ENST00000564387 PPP2R5BQ15173 497 aa20.09■□□□□ 0.81
USB1-209ENST00000564387 PWP2Q15269 919 aaKnown RBP20.09■□□□□ 0.81
USB1-209ENST00000564387 SYNE3Q6ZMZ3 975 aa20.09■□□□□ 0.81
USB1-209ENST00000564387 TMTC3Q6ZXV5 915 aa20.09■□□□□ 0.81
USB1-209ENST00000564387 MORC4Q8TE76 937 aa20.09■□□□□ 0.81
USB1-209ENST00000564387 FAM217BQ9NTX9 383 aaPredicted RBP20.09■□□□□ 0.81
USB1-209ENST00000564387 OGDHLQ9ULD0 1010 aa20.09■□□□□ 0.81
USB1-209ENST00000564387 BAZ2BQ9UIF8 2168 aaKnown RBP20.08■□□□□ 0.81
USB1-209ENST00000564387 ZBTB43O43298 467 aa20.08■□□□□ 0.81
USB1-209ENST00000564387 ZNF865P0CJ78 1059 aaPredicted RBP20.08■□□□□ 0.81
USB1-209ENST00000564387 RPS6P62753 249 aaKnown RBP20.08■□□□□ 0.81
USB1-209ENST00000564387 USH1GQ495M9 461 aa20.08■□□□□ 0.81
USB1-209ENST00000564387 NSMFQ6X4W1 530 aa20.08■□□□□ 0.81
USB1-209ENST00000564387 MICU3Q86XE3 530 aa20.08■□□□□ 0.81
USB1-209ENST00000564387 SAMD3Q8N6K7 520 aa20.08■□□□□ 0.81
USB1-209ENST00000564387 BRF1Q92994 677 aa20.08■□□□□ 0.81
USB1-209ENST00000564387 RBM28Q9NW13 759 aaKnown RBP20.08■□□□□ 0.81
USB1-209ENST00000564387 MRPL11Q9Y3B7 192 aaKnown RBP20.08■□□□□ 0.81
USB1-209ENST00000564387 CYP46A1Q9Y6A2 500 aa20.08■□□□□ 0.81
USB1-209ENST00000564387 TNRC18O15417 2968 aaPredicted RBP20.07■□□□□ 0.8
USB1-209ENST00000564387 KLF18A0A0U1RQI7 1052 aa20.07■□□□□ 0.8
USB1-209ENST00000564387 SEPT4O43236 478 aa20.07■□□□□ 0.8
USB1-209ENST00000564387 MSCO60682 206 aa20.07■□□□□ 0.8
USB1-209ENST00000564387 TOB2Q14106 344 aaPredicted RBP20.07■□□□□ 0.8
USB1-209ENST00000564387 RNF207Q6ZRF8 634 aa20.07■□□□□ 0.8
USB1-209ENST00000564387 KATNBL1Q9H079 304 aa20.07■□□□□ 0.8
USB1-209ENST00000564387 ALDH8A1Q9H2A2 487 aaPredicted RBP20.07■□□□□ 0.8
USB1-209ENST00000564387 MAP3K20Q9NYL2 800 aaKnown RBP20.07■□□□□ 0.8
USB1-209ENST00000564387 PCDHA1Q9Y5I3 950 aa20.07■□□□□ 0.8
USB1-209ENST00000564387 ASB14A6NK59 587 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms