RNA–Protein interactions for RNA: ENST00000564286.1

CFDP1-203, Transcript of craniofacial development protein 1, humanhuman

TSL 5

Gene CFDP1, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-203ENST00000564286 TDO2P48775 406 aa12.76□□□□□ -0.37
CFDP1-203ENST00000564286 MRPS5P82675 430 aaKnown RBP12.76□□□□□ -0.37
CFDP1-203ENST00000564286 TNFAIP2Q03169 654 aa12.76□□□□□ -0.37
CFDP1-203ENST00000564286 IKQ13123 557 aaPredicted RBP12.76□□□□□ -0.37
CFDP1-203ENST00000564286 C16orf59Q7L2K0 433 aa12.76□□□□□ -0.37
CFDP1-203ENST00000564286 CCDC144CPQ8IYA2 1237 aa12.76□□□□□ -0.37
CFDP1-203ENST00000564286 ASB2Q96Q27 587 aa12.76□□□□□ -0.37
CFDP1-203ENST00000564286 STRBPQ96SI9 672 aaKnown RBP12.76□□□□□ -0.37
CFDP1-203ENST00000564286 SEZ6LQ9BYH1 1024 aa12.76□□□□□ -0.37
CFDP1-203ENST00000564286 LRRCC1Q9C099 1032 aa12.76□□□□□ -0.37
CFDP1-203ENST00000564286 AP5M1Q9H0R1 490 aa12.76□□□□□ -0.37
CFDP1-203ENST00000564286 SLC28A3Q9HAS3 691 aa12.76□□□□□ -0.37
CFDP1-203ENST00000564286 IL23AQ9NPF7 189 aa12.76□□□□□ -0.37
CFDP1-203ENST00000564286 HOMER2Q9NSB8 354 aa12.76□□□□□ -0.37
CFDP1-203ENST00000564286 SYNPO2Q9UMS6 1093 aa12.76□□□□□ -0.37
CFDP1-203ENST00000564286 ASB14A6NK59 587 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 TTLL1O95922 423 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 CHGBP05060 677 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 GNAT2P19087 354 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 COL9A1P20849 921 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 CYP2C18P33260 490 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 RASIP1Q5U651 963 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.75□□□□□ -0.37
CFDP1-203ENST00000564286 SIRT2Q8IXJ6 389 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 FAM126BQ8IXS8 530 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 HERVK_113Q902F9 699 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 MKL1Q969V6 931 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 GPATCH3Q96I76 525 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 HIPK3Q9H422 1215 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 ACAD9Q9H845 621 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 ZBTB40Q9NUA8 1239 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 COG6Q9Y2V7 657 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 VCANP13611 3396 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 PRUNE2Q8WUY3 3088 aa12.75□□□□□ -0.37
CFDP1-203ENST00000564286 GSG1L2A8MUP6 293 aa12.74□□□□□ -0.37
CFDP1-203ENST00000564286 ZFYP08048 801 aaPredicted RBP12.74□□□□□ -0.37
CFDP1-203ENST00000564286 SLC3A2P08195 630 aaKnown RBP12.74□□□□□ -0.37
CFDP1-203ENST00000564286 BMP3P12645 472 aa12.74□□□□□ -0.37
CFDP1-203ENST00000564286 CCDC85BQ15834 202 aaPredicted RBP12.74□□□□□ -0.37
CFDP1-203ENST00000564286 LRRFIP1Q32MZ4 808 aaKnown RBP12.74□□□□□ -0.37
CFDP1-203ENST00000564286 SLFN13Q68D06 897 aa12.74□□□□□ -0.37
CFDP1-203ENST00000564286 GMCL1P1Q8NEA9 526 aa12.74□□□□□ -0.37
CFDP1-203ENST00000564286 CHURC1Q8WUH1 139 aa12.74□□□□□ -0.37
CFDP1-203ENST00000564286 ECHDC1Q9NTX5 307 aa12.74□□□□□ -0.37
CFDP1-203ENST00000564286 MTMR4Q9NYA4 1195 aa12.74□□□□□ -0.37
CFDP1-203ENST00000564286 POTEB3A0JP26 581 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 TMEM232C9JQI7 657 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 ADCY6O43306 1168 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 CD4P01730 458 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 TSPY3P0CV98 308 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 TSPY8P0CW00 308 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 STAT2P52630 851 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 BEX3Q00994 111 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 CNTN2Q02246 1040 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 PDE4BQ07343 736 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 ITGA7Q13683 1181 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 TKFCQ3LXA3 575 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 PPP4R3BQ5MIZ7 849 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 POTEBQ6S5H4 581 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 CXCL17Q6UXB2 119 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 FAM160B2Q86V87 743 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 RPUSD2Q8IZ73 545 aaKnown RBP12.73□□□□□ -0.37
CFDP1-203ENST00000564286 LRRC47Q8N1G4 583 aaKnown RBP12.73□□□□□ -0.37
CFDP1-203ENST00000564286 KBTBD3Q8NAB2 608 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 ADAMTS19Q8TE59 1207 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 APPBP2Q92624 585 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 CEP95Q96GE4 821 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 NACAP1Q9BZK3 213 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 NKX2-4Q9H2Z4 354 aa12.73□□□□□ -0.37
CFDP1-203ENST00000564286 IGKV6D-41A0A0C4DH26 115 aa12.72□□□□□ -0.37
CFDP1-203ENST00000564286 RNF113AO15541 343 aaKnown RBP12.72□□□□□ -0.37
CFDP1-203ENST00000564286 DYNC1LI2O43237 492 aaPredicted RBP12.72□□□□□ -0.37
CFDP1-203ENST00000564286 PRDM1O75626 825 aa12.72□□□□□ -0.37
CFDP1-203ENST00000564286 NKX3-2P78367 333 aa12.72□□□□□ -0.37
CFDP1-203ENST00000564286 FSCN1Q16658 493 aaKnown RBP12.72□□□□□ -0.37
CFDP1-203ENST00000564286 IQSEC1Q6DN90 963 aa12.72□□□□□ -0.37
CFDP1-203ENST00000564286 OTOP2Q7RTS6 562 aa12.72□□□□□ -0.37
CFDP1-203ENST00000564286 TLK2Q86UE8 772 aa12.72□□□□□ -0.37
CFDP1-203ENST00000564286 UHRF1Q96T88 793 aaPredicted RBP12.72□□□□□ -0.37
CFDP1-203ENST00000564286 RNF146Q9NTX7 359 aa12.72□□□□□ -0.37
CFDP1-203ENST00000564286 SLC4A7Q9Y6M7 1214 aa12.72□□□□□ -0.37
CFDP1-203ENST00000564286 SMCHD1A6NHR9 2005 aa12.72□□□□□ -0.37
CFDP1-203ENST00000564286 MYH8P13535 1937 aa12.72□□□□□ -0.37
CFDP1-203ENST00000564286 ZNFX1Q9P2E3 1918 aaKnown RBP12.72□□□□□ -0.37
CFDP1-203ENST00000564286 COL11A1P12107 1806 aaPredicted RBP12.72□□□□□ -0.37
CFDP1-203ENST00000564286 SPTBN5Q9NRC6 3674 aaKnown RBP12.71□□□□□ -0.37
CFDP1-203ENST00000564286 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.71□□□□□ -0.37
CFDP1-203ENST00000564286 PATL2C9JE40 543 aaKnown RBP12.71□□□□□ -0.37
CFDP1-203ENST00000564286 GPAA1O43292 621 aa12.71□□□□□ -0.37
CFDP1-203ENST00000564286 ALAS1P13196 640 aa12.71□□□□□ -0.37
CFDP1-203ENST00000564286 SLC1A4P43007 532 aa12.71□□□□□ -0.37
CFDP1-203ENST00000564286 CCL23P55773 120 aa12.71□□□□□ -0.37
CFDP1-203ENST00000564286 AAK1Q2M2I8 961 aa12.71□□□□□ -0.37
CFDP1-203ENST00000564286 PPP2R2DQ66LE6 453 aa12.71□□□□□ -0.37
CFDP1-203ENST00000564286 FAM133AQ8N9E0 248 aa12.71□□□□□ -0.37
CFDP1-203ENST00000564286 SLC43A3Q8NBI5 491 aa12.71□□□□□ -0.37
CFDP1-203ENST00000564286 STAG1Q8WVM7 1258 aa12.71□□□□□ -0.37
CFDP1-203ENST00000564286 OSBP2Q969R2 916 aa12.71□□□□□ -0.37
CFDP1-203ENST00000564286 FGD4Q96M96 766 aa12.71□□□□□ -0.37
CFDP1-203ENST00000564286 TRERF1Q96PN7 1200 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms