RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 RNF146Q9NTX7 359 aa20.49■□□□□ 0.87
MAP1LC3B-204ENST00000563720 TMEM39AQ9NV64 488 aa20.49■□□□□ 0.87
MAP1LC3B-204ENST00000563720 FRMPD2Q68DX3 1309 aaPredicted RBP20.49■□□□□ 0.87
MAP1LC3B-204ENST00000563720 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.48■□□□□ 0.87
MAP1LC3B-204ENST00000563720 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.48■□□□□ 0.87
MAP1LC3B-204ENST00000563720 KIAA0355O15063 1070 aa20.48■□□□□ 0.87
MAP1LC3B-204ENST00000563720 PDHBP11177 359 aa20.48■□□□□ 0.87
MAP1LC3B-204ENST00000563720 SLC16A2P36021 539 aa20.48■□□□□ 0.87
MAP1LC3B-204ENST00000563720 GRIN2CQ14957 1233 aa20.48■□□□□ 0.87
MAP1LC3B-204ENST00000563720 TKFCQ3LXA3 575 aa20.48■□□□□ 0.87
MAP1LC3B-204ENST00000563720 ZKSCAN3Q9BRR0 538 aa20.48■□□□□ 0.87
MAP1LC3B-204ENST00000563720 RANBP17Q9H2T7 1088 aaKnown RBP20.48■□□□□ 0.87
MAP1LC3B-204ENST00000563720 A1CFQ9NQ94 594 aaKnown RBP20.48■□□□□ 0.87
MAP1LC3B-204ENST00000563720 CNPY2Q9Y2B0 182 aa20.48■□□□□ 0.87
MAP1LC3B-204ENST00000563720 PRUNE2Q8WUY3 3088 aa20.47■□□□□ 0.87
MAP1LC3B-204ENST00000563720 A0A1W2PQ45 241 aaPredicted RBP20.47■□□□□ 0.87
MAP1LC3B-204ENST00000563720 A0A1W2PQY0 241 aa20.47■□□□□ 0.87
MAP1LC3B-204ENST00000563720 KDM4AO75164 1064 aa20.47■□□□□ 0.87
MAP1LC3B-204ENST00000563720 ALAS1P13196 640 aa20.47■□□□□ 0.87
MAP1LC3B-204ENST00000563720 AKR1A1P14550 325 aa20.47■□□□□ 0.87
MAP1LC3B-204ENST00000563720 DNAJB2P25686 324 aa20.47■□□□□ 0.87
MAP1LC3B-204ENST00000563720 NT5C2P49902 561 aa20.47■□□□□ 0.87
MAP1LC3B-204ENST00000563720 IMMTQ16891 758 aaKnown RBP20.47■□□□□ 0.87
MAP1LC3B-204ENST00000563720 TJAP1Q5JTD0 557 aa20.47■□□□□ 0.87
MAP1LC3B-204ENST00000563720 FAM133AQ8N9E0 248 aa20.47■□□□□ 0.87
MAP1LC3B-204ENST00000563720 TRERF1Q96PN7 1200 aa20.47■□□□□ 0.87
MAP1LC3B-204ENST00000563720 GPCPD1Q9NPB8 672 aa20.47■□□□□ 0.87
MAP1LC3B-204ENST00000563720 CTNNA3Q9UI47 895 aa20.47■□□□□ 0.87
MAP1LC3B-204ENST00000563720 RAD50Q92878 1312 aa20.47■□□□□ 0.87
MAP1LC3B-204ENST00000563720 ICAM1P05362 532 aa20.46■□□□□ 0.87
MAP1LC3B-204ENST00000563720 SNHG28P0DPA3 235 aa20.46■□□□□ 0.87
MAP1LC3B-204ENST00000563720 CNTN2Q02246 1040 aa20.46■□□□□ 0.87
MAP1LC3B-204ENST00000563720 MUM1L1Q5H9M0 696 aa20.46■□□□□ 0.87
MAP1LC3B-204ENST00000563720 SYDE2Q5VT97 1194 aa20.46■□□□□ 0.87
MAP1LC3B-204ENST00000563720 DGKHQ86XP1 1220 aa20.46■□□□□ 0.87
MAP1LC3B-204ENST00000563720 LENG1Q96BZ8 264 aaPredicted RBP20.46■□□□□ 0.87
MAP1LC3B-204ENST00000563720 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.46■□□□□ 0.87
MAP1LC3B-204ENST00000563720 DCDC2CA8MYV0 355 aa20.45■□□□□ 0.86
MAP1LC3B-204ENST00000563720 B4E1Z4 1266 aa20.45■□□□□ 0.86
MAP1LC3B-204ENST00000563720 CHMLP26374 656 aa20.45■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ZNF543Q08ER8 600 aa20.45■□□□□ 0.86
MAP1LC3B-204ENST00000563720 USP38Q8NB14 1042 aa20.45■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ZNF576Q9H609 170 aa20.45■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ZHX1Q9UKY1 873 aaPredicted RBP20.45■□□□□ 0.86
MAP1LC3B-204ENST00000563720 CCPG1Q9ULG6 757 aa20.45■□□□□ 0.86
MAP1LC3B-204ENST00000563720 SOWAHBA6NEL2 793 aa20.44■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ARMCX2Q7L311 632 aa20.44■□□□□ 0.86
MAP1LC3B-204ENST00000563720 NUP133Q8WUM0 1156 aa20.44■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ANKS1AQ92625 1134 aa20.44■□□□□ 0.86
MAP1LC3B-204ENST00000563720 STARD7Q9NQZ5 370 aa20.44■□□□□ 0.86
MAP1LC3B-204ENST00000563720 TNFRSF10AO00220 468 aa20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ADAMTS4O75173 837 aa20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 FAAP100Q0VG06 881 aa20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ACVR2BQ13705 512 aa20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 CCDC178Q5BJE1 867 aa20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 IQCA1Q86XH1 822 aa20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 CCDC144CPQ8IYA2 1237 aa20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 TIFAQ96CG3 184 aa20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 TOX2Q96NM4 488 aa20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ZSCAN10Q96SZ4 725 aaPredicted RBP20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 TSEN34Q9BSV6 310 aaKnown RBP20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 KATNBL1Q9H079 304 aa20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ABHD16BQ9H3Z7 469 aa20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 CYP39A1Q9NYL5 469 aa20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ZSWIM5Q9P217 1185 aa20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 FAM184BQ9ULE4 1060 aa20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ASTN1O14525 1302 aa20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 SPTBN5Q9NRC6 3674 aaKnown RBP20.43■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ADCY6O43306 1168 aa20.42■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ANKRD33Q7Z3H0 272 aa20.42■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ENAHQ8N8S7 591 aaPredicted RBP20.42■□□□□ 0.86
MAP1LC3B-204ENST00000563720 PNMA1Q8ND90 353 aa20.42■□□□□ 0.86
MAP1LC3B-204ENST00000563720 RUFY2Q8WXA3 655 aa20.42■□□□□ 0.86
MAP1LC3B-204ENST00000563720 GAS2L1Q99501 681 aaPredicted RBP20.42■□□□□ 0.86
MAP1LC3B-204ENST00000563720 KRT23Q9C075 422 aa20.42■□□□□ 0.86
MAP1LC3B-204ENST00000563720 SYNRGQ9UMZ2 1314 aa20.42■□□□□ 0.86
MAP1LC3B-204ENST00000563720 CDH23Q9H251 3354 aa20.41■□□□□ 0.86
MAP1LC3B-204ENST00000563720 GOLGA8HP0CJ92 632 aa20.41■□□□□ 0.86
MAP1LC3B-204ENST00000563720 COL9A1P20849 921 aa20.41■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ACLYP53396 1101 aa20.41■□□□□ 0.86
MAP1LC3B-204ENST00000563720 PTH1RQ03431 593 aa20.41■□□□□ 0.86
MAP1LC3B-204ENST00000563720 CCDC144BQ3MJ40 725 aa20.41■□□□□ 0.86
MAP1LC3B-204ENST00000563720 PPM1EQ8WY54 764 aa20.41■□□□□ 0.86
MAP1LC3B-204ENST00000563720 CNNM2Q9H8M5 875 aa20.41■□□□□ 0.86
MAP1LC3B-204ENST00000563720 TNKSO95271 1327 aa20.41■□□□□ 0.86
MAP1LC3B-204ENST00000563720 MOXD2PA6NHM9 499 aa20.4■□□□□ 0.86
MAP1LC3B-204ENST00000563720 DUSP11O75319 330 aaKnown RBP20.4■□□□□ 0.86
MAP1LC3B-204ENST00000563720 TIMP1P01033 207 aa20.4■□□□□ 0.86
MAP1LC3B-204ENST00000563720 GPATCH4Q5T3I0 446 aaKnown RBP20.4■□□□□ 0.86
MAP1LC3B-204ENST00000563720 NSMFQ6X4W1 530 aa20.4■□□□□ 0.86
MAP1LC3B-204ENST00000563720 KLHDC9Q8NEP7 349 aa20.4■□□□□ 0.86
MAP1LC3B-204ENST00000563720 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.4■□□□□ 0.86
MAP1LC3B-204ENST00000563720 CPVLQ9H3G5 476 aa20.4■□□□□ 0.86
MAP1LC3B-204ENST00000563720 KAT14Q9H8E8 782 aa20.4■□□□□ 0.86
MAP1LC3B-204ENST00000563720 ASB14A6NK59 587 aa20.39■□□□□ 0.85
MAP1LC3B-204ENST00000563720 NFIBO00712 420 aa20.39■□□□□ 0.85
MAP1LC3B-204ENST00000563720 SGSM2O43147 1006 aa20.39■□□□□ 0.85
MAP1LC3B-204ENST00000563720 PPIGQ13427 754 aaKnown RBP eCLIP20.39■□□□□ 0.85
MAP1LC3B-204ENST00000563720 KCNA10Q16322 511 aa20.39■□□□□ 0.85
MAP1LC3B-204ENST00000563720 PURBQ96QR8 312 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms