RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 LRRC2Q9BYS8 371 aa23.63■■□□□ 1.37
CMTM3-206ENST00000563672 DDX20Q9UHI6 824 aaKnown RBP23.63■■□□□ 1.37
CMTM3-206ENST00000563672 SNX14Q9Y5W7 946 aa23.63■■□□□ 1.37
CMTM3-206ENST00000563672 SYNGAP1Q96PV0 1343 aa23.62■■□□□ 1.37
CMTM3-206ENST00000563672 NFIBO00712 420 aa23.62■■□□□ 1.37
CMTM3-206ENST00000563672 QRICH1Q2TAL8 776 aa23.62■■□□□ 1.37
CMTM3-206ENST00000563672 SGMS1Q86VZ5 419 aa23.62■■□□□ 1.37
CMTM3-206ENST00000563672 ANKLE1Q8NAG6 615 aa23.62■■□□□ 1.37
CMTM3-206ENST00000563672 RIOX1Q9H6W3 641 aa23.62■■□□□ 1.37
CMTM3-206ENST00000563672 TNRC18O15417 2968 aaPredicted RBP23.62■■□□□ 1.37
CMTM3-206ENST00000563672 SOWAHBA6NEL2 793 aa23.61■■□□□ 1.37
CMTM3-206ENST00000563672 CCDC69A6NI79 296 aa23.61■■□□□ 1.37
CMTM3-206ENST00000563672 SEPT4O43236 478 aa23.61■■□□□ 1.37
CMTM3-206ENST00000563672 DHX16O60231 1041 aaKnown RBP23.61■■□□□ 1.37
CMTM3-206ENST00000563672 MSCO60682 206 aa23.61■■□□□ 1.37
CMTM3-206ENST00000563672 SNAI1O95863 264 aaPredicted RBP23.61■■□□□ 1.37
CMTM3-206ENST00000563672 HMGB1P09429 215 aaKnown RBP23.61■■□□□ 1.37
CMTM3-206ENST00000563672 CNGA1P29973 690 aa23.61■■□□□ 1.37
CMTM3-206ENST00000563672 NSMFQ6X4W1 530 aa23.61■■□□□ 1.37
CMTM3-206ENST00000563672 NFXL1Q6ZNB6 911 aa23.61■■□□□ 1.37
CMTM3-206ENST00000563672 NUP133Q8WUM0 1156 aa23.61■■□□□ 1.37
CMTM3-206ENST00000563672 USP26Q9BXU7 913 aa23.61■■□□□ 1.37
CMTM3-206ENST00000563672 SMCHD1A6NHR9 2005 aa23.6■■□□□ 1.37
CMTM3-206ENST00000563672 CYTH3O43739 400 aa23.6■■□□□ 1.37
CMTM3-206ENST00000563672 FARP2O94887 1054 aaPredicted RBP23.6■■□□□ 1.37
CMTM3-206ENST00000563672 MNX1P50219 401 aaPredicted RBP23.6■■□□□ 1.37
CMTM3-206ENST00000563672 BAATQ14032 418 aaPredicted RBP23.6■■□□□ 1.37
CMTM3-206ENST00000563672 USH1GQ495M9 461 aa23.6■■□□□ 1.37
CMTM3-206ENST00000563672 RGS22Q8NE09 1264 aa23.6■■□□□ 1.37
CMTM3-206ENST00000563672 MYL10Q9BUA6 226 aa23.6■■□□□ 1.37
CMTM3-206ENST00000563672 ASTN1O14525 1302 aa23.59■■□□□ 1.37
CMTM3-206ENST00000563672 ZBTB5O15062 677 aa23.59■■□□□ 1.37
CMTM3-206ENST00000563672 ZNF865P0CJ78 1059 aaPredicted RBP23.59■■□□□ 1.37
CMTM3-206ENST00000563672 KIF5BP33176 963 aa23.59■■□□□ 1.37
CMTM3-206ENST00000563672 FBXO11Q86XK2 927 aa23.59■■□□□ 1.37
CMTM3-206ENST00000563672 TCEANC2Q96MN5 208 aa23.59■■□□□ 1.37
CMTM3-206ENST00000563672 MAF1Q9H063 256 aa23.59■■□□□ 1.37
CMTM3-206ENST00000563672 CNPY2Q9Y2B0 182 aa23.59■■□□□ 1.37
CMTM3-206ENST00000563672 ABCB11O95342 1321 aa23.59■■□□□ 1.37
CMTM3-206ENST00000563672 PLXNA1Q9UIW2 1896 aa23.58■■□□□ 1.37
CMTM3-206ENST00000563672 CALM1P0DP23 149 aa23.58■■□□□ 1.37
CMTM3-206ENST00000563672 CALM2P0DP24 149 aa23.58■■□□□ 1.37
CMTM3-206ENST00000563672 CALM3P0DP25 149 aa23.58■■□□□ 1.37
CMTM3-206ENST00000563672 CCDC144CPQ8IYA2 1237 aa23.58■■□□□ 1.37
CMTM3-206ENST00000563672 CTCFLQ8NI51 663 aaPredicted RBP23.58■■□□□ 1.37
CMTM3-206ENST00000563672 JAKMIP1Q96N16 626 aaKnown RBP23.58■■□□□ 1.37
CMTM3-206ENST00000563672 PURBQ96QR8 312 aaKnown RBP23.58■■□□□ 1.37
CMTM3-206ENST00000563672 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.58■■□□□ 1.37
CMTM3-206ENST00000563672 SLC12A7Q9Y666 1083 aa23.58■■□□□ 1.37
CMTM3-206ENST00000563672 PDE4DIPQ5VU43 2346 aa23.58■■□□□ 1.36
CMTM3-206ENST00000563672 PPP1R11O60927 126 aaPredicted RBP23.57■■□□□ 1.36
CMTM3-206ENST00000563672 SMARCA1P28370 1054 aa23.57■■□□□ 1.36
CMTM3-206ENST00000563672 RNF207Q6ZRF8 634 aa23.57■■□□□ 1.36
CMTM3-206ENST00000563672 ARMCX2Q7L311 632 aa23.57■■□□□ 1.36
CMTM3-206ENST00000563672 PAWRQ96IZ0 340 aaKnown RBP23.57■■□□□ 1.36
CMTM3-206ENST00000563672 PIGSQ96S52 555 aa23.57■■□□□ 1.36
CMTM3-206ENST00000563672 AMNQ9BXJ7 453 aa23.57■■□□□ 1.36
CMTM3-206ENST00000563672 PTPDC1A2A3K4 754 aa23.56■■□□□ 1.36
CMTM3-206ENST00000563672 ASB14A6NK59 587 aa23.56■■□□□ 1.36
CMTM3-206ENST00000563672 RPS6P62753 249 aaKnown RBP23.56■■□□□ 1.36
CMTM3-206ENST00000563672 ACVR2BQ13705 512 aa23.56■■□□□ 1.36
CMTM3-206ENST00000563672 SLC30A10Q6XR72 485 aa23.56■■□□□ 1.36
CMTM3-206ENST00000563672 DIS3LQ8TF46 1054 aaKnown RBP23.56■■□□□ 1.36
CMTM3-206ENST00000563672 LZTS2Q9BRK4 669 aa23.56■■□□□ 1.36
CMTM3-206ENST00000563672 SPZ1Q9BXG8 430 aa23.56■■□□□ 1.36
CMTM3-206ENST00000563672 KATNBL1Q9H079 304 aa23.56■■□□□ 1.36
CMTM3-206ENST00000563672 ABHD16BQ9H3Z7 469 aa23.56■■□□□ 1.36
CMTM3-206ENST00000563672 BRPF3Q9ULD4 1205 aa23.56■■□□□ 1.36
CMTM3-206ENST00000563672 MRPL11Q9Y3B7 192 aaKnown RBP23.56■■□□□ 1.36
CMTM3-206ENST00000563672 PNMA6FA0A0J9YX94 578 aa23.55■■□□□ 1.36
CMTM3-206ENST00000563672 CPA1P15085 419 aa23.55■■□□□ 1.36
CMTM3-206ENST00000563672 RXRAP19793 462 aa23.55■■□□□ 1.36
CMTM3-206ENST00000563672 GNAQP50148 359 aa23.55■■□□□ 1.36
CMTM3-206ENST00000563672 APOA5Q6Q788 366 aa23.55■■□□□ 1.36
CMTM3-206ENST00000563672 BLOC1S2Q6QNY1 142 aa23.55■■□□□ 1.36
CMTM3-206ENST00000563672 NECAB2Q7Z6G3 386 aa23.55■■□□□ 1.36
CMTM3-206ENST00000563672 FANCBQ8NB91 859 aa23.55■■□□□ 1.36
CMTM3-206ENST00000563672 MORC4Q8TE76 937 aa23.55■■□□□ 1.36
CMTM3-206ENST00000563672 TBC1D5Q92609 795 aa23.55■■□□□ 1.36
CMTM3-206ENST00000563672 CALML3P27482 149 aa23.54■■□□□ 1.36
CMTM3-206ENST00000563672 PSMA5P28066 241 aa23.54■■□□□ 1.36
CMTM3-206ENST00000563672 ANO1Q5XXA6 986 aa23.54■■□□□ 1.36
CMTM3-206ENST00000563672 HOMER1Q86YM7 354 aa23.54■■□□□ 1.36
CMTM3-206ENST00000563672 FBXL16Q8N461 479 aa23.54■■□□□ 1.36
CMTM3-206ENST00000563672 SRBD1Q8N5C6 995 aaKnown RBP23.54■■□□□ 1.36
CMTM3-206ENST00000563672 ADD3Q9UEY8 706 aaKnown RBP23.54■■□□□ 1.36
CMTM3-206ENST00000563672 ZHX1Q9UKY1 873 aaPredicted RBP23.54■■□□□ 1.36
CMTM3-206ENST00000563672 PCDHA1Q9Y5I3 950 aa23.54■■□□□ 1.36
CMTM3-206ENST00000563672 LOC102724159A0A0B4J2E5 919 aa23.53■■□□□ 1.36
CMTM3-206ENST00000563672 OPLAHO14841 1288 aa23.53■■□□□ 1.36
CMTM3-206ENST00000563672 PLEKHA8P1O95397 391 aa23.53■■□□□ 1.36
CMTM3-206ENST00000563672 AKR1A1P14550 325 aa23.53■■□□□ 1.36
CMTM3-206ENST00000563672 RPS6KB1P23443 525 aa23.53■■□□□ 1.36
CMTM3-206ENST00000563672 TRAF1Q13077 416 aa23.53■■□□□ 1.36
CMTM3-206ENST00000563672 PWP2Q15269 919 aaKnown RBP23.53■■□□□ 1.36
CMTM3-206ENST00000563672 SYNE3Q6ZMZ3 975 aa23.53■■□□□ 1.36
CMTM3-206ENST00000563672 MCF2L2Q86YR7 1114 aa23.53■■□□□ 1.36
CMTM3-206ENST00000563672 RAB11FIP4Q86YS3 637 aa23.53■■□□□ 1.36
CMTM3-206ENST00000563672 FAM184BQ9ULE4 1060 aa23.53■■□□□ 1.36
CMTM3-206ENST00000563672 COL6A1P12109 1028 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms