RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 GNGT1P63211 74 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 KCTD16Q68DU8 428 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 RRAGAQ7L523 313 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 ZNF34Q8IZ26 560 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 PNMA1Q8ND90 353 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 DYNLL2Q96FJ2 89 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 PSMD14O00487 310 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 NCK2O43639 380 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 PPFIA4O75335 1185 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 PLCG1P19174 1290 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 IL6STP40189 918 aaPredicted RBP13.17□□□□□ -0.3
ABCA3-203ENST00000563623 TECP42680 631 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 NAPAP54920 295 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 PFKFB3Q16875 520 aaPredicted RBP13.17□□□□□ -0.3
ABCA3-203ENST00000563623 WDR93Q6P2C0 686 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 FAM114A1Q8IWE2 563 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 BCAS4Q8TDM0 211 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 EHD4Q9H223 541 aa13.17□□□□□ -0.3
ABCA3-203ENST00000563623 MAGEA1P43355 309 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 TRAPPC10P48553 1259 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 SOGA3Q5TF21 947 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 WDR59Q6PJI9 974 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 P2RX5Q93086 422 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 ALS2CR12Q96Q35 445 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 MTA3Q9BTC8 594 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 LRRC1Q9BTT6 524 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 NLRC4Q9NPP4 1024 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 HSF2BPO75031 334 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 TXKP42681 527 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 MAGEA9P43362 315 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 ZBED6P86452 979 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 ANKRD40Q6AI12 368 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 NFRKBQ6P4R8 1299 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 ZNF444Q8N0Y2 327 aaPredicted RBP13.16□□□□□ -0.3
ABCA3-203ENST00000563623 MYH7P12883 1935 aa13.16□□□□□ -0.3
ABCA3-203ENST00000563623 BICDL2A1A5D9 508 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 ERVV-1B6SEH8 477 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 SYF2O95926 243 aaKnown RBP13.15□□□□□ -0.3
ABCA3-203ENST00000563623 TSPY3P0CV98 308 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 TSPY8P0CW00 308 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 AMOTL1Q8IY63 956 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 HDAC7Q8WUI4 952 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 PPM1EQ8WY54 764 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.15□□□□□ -0.3
ABCA3-203ENST00000563623 ZHX3Q9H4I2 956 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 THAP9Q9H5L6 903 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 SAP30BPQ9UHR5 308 aaKnown RBP13.15□□□□□ -0.3
ABCA3-203ENST00000563623 KCPQ6ZWJ8 1503 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 USP17L3A6NCW0 530 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 USP17L4A6NCW7 530 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 EIF4A3P38919 411 aaKnown RBP13.15□□□□□ -0.3
ABCA3-203ENST00000563623 STK4Q13043 487 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 NPY5RQ15761 445 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 PTPROQ16827 1216 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 ICE2Q659A1 982 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 TMED8Q6PL24 325 aaPredicted RBP13.15□□□□□ -0.3
ABCA3-203ENST00000563623 CCNI2Q6ZMN8 369 aaPredicted RBP13.15□□□□□ -0.3
ABCA3-203ENST00000563623 USP17L1Q7RTZ2 530 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 RRP36Q96EU6 259 aaKnown RBP13.15□□□□□ -0.3
ABCA3-203ENST00000563623 RIOK1Q9BRS2 568 aaKnown RBP13.15□□□□□ -0.3
ABCA3-203ENST00000563623 NUP58Q9BVL2 599 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 CCDC87Q9NVE4 849 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 PCDHA4Q9UN74 947 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 AKAP11Q9UKA4 1901 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 TJP1Q07157 1748 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 ADAMTS7Q9UKP4 1686 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 PRDX5P30044 214 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 MECOMQ03112 1051 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 CALML4Q96GE6 196 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 RPGRIP1Q96KN7 1286 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 CAPS2Q9BXY5 557 aa13.15□□□□□ -0.3
ABCA3-203ENST00000563623 DMGDHQ9UI17 866 aaKnown RBP13.15□□□□□ -0.3
ABCA3-203ENST00000563623 CRKLP46109 303 aaKnown RBP13.14□□□□□ -0.31
ABCA3-203ENST00000563623 C8orf74Q6P047 294 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.14□□□□□ -0.31
ABCA3-203ENST00000563623 SMIM5Q71RC9 77 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 TNFRSF25Q93038 417 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 RAD21O60216 631 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 IBSPP21815 317 aaPredicted RBP13.14□□□□□ -0.31
ABCA3-203ENST00000563623 CCNE1P24864 410 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 GUCY2FP51841 1108 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 KCNQ4P56696 695 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 ARL6IP4Q66PJ3 421 aaKnown RBP13.14□□□□□ -0.31
ABCA3-203ENST00000563623 DNAJC7Q99615 494 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 DCP1AQ9NPI6 582 aaPredicted RBP13.14□□□□□ -0.31
ABCA3-203ENST00000563623 CAMTA1Q9Y6Y1 1673 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 SRGNP10124 158 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 VAV2P52735 878 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 RASSF7Q02833 373 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 LRRC41Q15345 812 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 BRIP1Q9BX63 1249 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 CAPN6Q9Y6Q1 641 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 MYH2Q9UKX2 1941 aa13.14□□□□□ -0.31
ABCA3-203ENST00000563623 A0A1W2PQC6 194 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 FAM170AA1A519 330 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 TXNRD1Q16881 649 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 TRIM58Q8NG06 486 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 ANAPC4Q9UJX5 808 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 PCDHA13Q9Y5I0 950 aa13.13□□□□□ -0.31
ABCA3-203ENST00000563623 PDS5AQ29RF7 1337 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms